Conservation of cofitness between PP_0127 and PP_5084 in Pseudomonas putida KT2440

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0127 Thiol:disulfide interchange protein 1.0 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.27 15
Pseudomonas simiae WCS417 0.84 PS417_00425 thiol:disulfide interchange protein 0.82 PS417_01955 peptidase — —
Pseudomonas fluorescens SBW25 0.84 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL 0.82 PFLU_RS02000 penicillin-binding protein 1A low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL 0.82 PFLU_RS02000 penicillin-binding protein 1A low > 109
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1879 Periplasmic thiol:disulfide interchange protein DsbA 0.83 Pf1N1B4_1544 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_11445 thiol:disulfide interchange protein 0.84 AO356_09420 peptidase — —
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_4158 Periplasmic thiol:disulfide interchange protein DsbA 0.80 Pf6N2E2_3761 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_590 Periplasmic thiol:disulfide interchange protein DsbA 0.79 PfGW456L13_282 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Pseudomonas sp. RS175 0.80 PFR28_04628 Thiol:disulfide interchange protein DsbA 0.83 PFR28_05006 Penicillin-binding protein 1A low > 88
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_0268 DSBA oxidoreductase 0.82 Psyr_0402 Peptidoglycan glycosyltransferase 0.26 82
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_0268 DSBA oxidoreductase 0.82 Psyr_0402 Peptidoglycan glycosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_10950 thiol:disulfide interchange protein 0.84 AO353_12470 peptidase 0.35 35
Pseudomonas sp. S08-1 0.70 OH686_12195 Periplasmic thiol:disulfide interchange protein DsbA 0.76 OH686_10055 Multimodular transpeptidase-transglycosylase low > 80
Pseudomonas stutzeri RCH2 0.61 Psest_0186 Protein-disulfide isomerase 0.72 Psest_3720 penicillin-binding protein, 1A family low > 67
Acinetobacter radioresistens SK82 0.42 MPMX26_00035 Thiol:disulfide interchange protein DsbA 0.41 MPMX26_02817 Penicillin-binding protein 1A low > 36
Marinobacter adhaerens HP15 0.40 HP15_3325 DSBA oxidoreductase 0.47 HP15_473 penicillin-binding protein, 1A family — —
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS00835 DSBA oxidoreductase 0.34 RR42_RS19040 penicillin-binding protein — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS06350 thiol:disulfide interchange protein DsbA/DsbL 0.34 ABZR87_RS02625 penicillin-binding protein 1A — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS22755 thiol:disulfide interchange protein DsbA/DsbL 0.33 RPSI07_RS10265 penicillin-binding protein 1A — —
Ralstonia solanacearum GMI1000 0.36 RS_RS01400 thiol:disulfide interchange protein DsbA/DsbL 0.33 RS_RS14915 penicillin-binding protein 1A — —
Ralstonia solanacearum UW163 0.36 UW163_RS03020 thiol:disulfide interchange protein DsbA/DsbL 0.33 UW163_RS06645 penicillin-binding protein 1A — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS10560 thiol:disulfide interchange protein DsbA/DsbL 0.33 RALBFv3_RS06970 penicillin-binding protein 1A — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS01165 thiol:disulfide interchange protein DsbA/DsbL 0.36 QEN71_RS28065 penicillin-binding protein 1A low > 153
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02081 thiol:disulfide interchange protein DsbA 0.36 H281DRAFT_05609 penicillin-binding protein 1A — —
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS02280 DSBA oxidoreductase 0.36 BPHYT_RS11390 penicillin-binding protein 1A — —
Paraburkholderia graminis OAS925 0.34 ABIE53_000598 thiol:disulfide interchange protein DsbA 0.35 ABIE53_003746 penicillin-binding protein 1A low > 113
Acidovorax sp. GW101-3H11 0.34 Ac3H11_724 Periplasmic thiol:disulfide interchange protein DsbA 0.33 Ac3H11_4700 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Variovorax sp. OAS795 0.32 ABID97_RS04765 thiol:disulfide interchange protein DsbA/DsbL 0.32 ABID97_RS02790 penicillin-binding protein 1A low > 91
Variovorax sp. SCN45 0.32 GFF6293 Periplasmic thiol:disulfide interchange protein DsbA 0.33 GFF3310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 127
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS12725 thiol:disulfide interchange protein DsbA/DsbL 0.43 ABZR86_RS11815 penicillin-binding protein 1A low > 74
Dechlorosoma suillum PS 0.30 Dsui_0675 putative dithiol-disulfide isomerase involved in polyketide biosynthesis 0.37 Dsui_1186 penicillin-binding protein, 1A family — —
Castellaniella sp019104865 MT123 0.29 ABCV34_RS12390 thiol:disulfide interchange protein DsbA/DsbL 0.31 ABCV34_RS12695 PBP1A family penicillin-binding protein — —
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS21760 DSBA oxidoreductase 0.33 HSERO_RS20890 penicillin-binding protein 1A — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS06960 thiol:disulfide interchange protein DsbA/DsbL 0.41 LRK55_RS11555 penicillin-binding protein 1A 0.58 39
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS07225 thiol:disulfide interchange protein DsbA/DsbL 0.41 LRK54_RS11830 penicillin-binding protein 1A low > 59
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF3065 Periplasmic thiol:disulfide interchange protein DsbA 0.33 GFF1338 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 90
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_0392 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 0.41 B158DRAFT_0757 penicillin-binding protein, 1A family — —
Shewanella oneidensis MR-1 0.22 SO0333 dsbA thiol:disulfide interchange protein DsbA (NCBI ptt file) 0.41 SO0280 mrcA penicillin-binding protein 1A (NCBI ptt file) — —
Shewanella sp. ANA-3 0.22 Shewana3_3838 DSBA oxidoreductase (RefSeq) 0.40 Shewana3_3900 1A family penicillin-binding protein (RefSeq) — —
Shewanella loihica PV-4 0.21 Shew_0265 DSBA oxidoreductase (RefSeq) 0.39 Shew_0207 1A family penicillin-binding protein (RefSeq) — —
Klebsiella michiganensis M5al 0.21 BWI76_RS00345 protein disulfide oxidoreductase DsbA 0.38 BWI76_RS26125 carboxypeptidase/penicillin-binding protein 1A low > 92
Shewanella amazonensis SB2B 0.20 Sama_3321 thiol:disulfide interchange protein DsbA (RefSeq) 0.40 Sama_3374 penicillin-binding protein 1A (RefSeq) low > 62
Enterobacter asburiae PDN3 0.20 EX28DRAFT_4341 Protein-disulfide isomerase 0.38 EX28DRAFT_4146 penicillin-binding protein, 1A family low > 76
Rahnella sp. WP5 0.20 EX31_RS15910 thiol:disulfide interchange protein DsbA 0.37 EX31_RS04750 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.51 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF2213 Periplasmic thiol:disulfide interchange protein DsbA 0.38 GFF623 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.70 13
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_00170 thiol:disulfide interchange protein DsbA 0.38 CSW01_13335 penicillin-binding protein 1A — —
Enterobacter sp. TBS_079 0.20 MPMX20_04603 Thiol:disulfide interchange protein DsbA 0.38 MPMX20_04284 Penicillin-binding protein 1A — —
Pantoea sp. MT58 0.20 IAI47_00425 thiol:disulfide interchange protein DsbA 0.38 IAI47_01860 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia fergusonii Becca 0.19 EFB2_04757 Thiol:disulfide interchange protein DsbA 0.37 EFB2_00432 Penicillin-binding protein 1A low > 86
Escherichia coli Nissle 1917 0.19 ECOLIN_RS22250 thiol:disulfide interchange protein DsbA 0.37 ECOLIN_RS19395 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 52
Escherichia coli ECRC98 0.19 JDDGAC_17795 dsbA thiol:disulfide interchange protein DsbA 0.37 JDDGAC_20710 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECOR27 0.19 NOLOHH_06300 dsbA thiol:disulfide interchange protein DsbA 0.37 NOLOHH_08870 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECRC62 0.19 BNILDI_05230 dsbA thiol:disulfide interchange protein DsbA 0.37 BNILDI_02650 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECRC101 0.19 MCAODC_04670 dsbA thiol:disulfide interchange protein DsbA 0.37 MCAODC_07610 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECOR38 0.19 HEPCGN_12805 dsbA thiol:disulfide interchange protein DsbA 0.37 HEPCGN_15900 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 85
Escherichia coli ECRC102 0.19 NIAGMN_11925 dsbA thiol:disulfide interchange protein DsbA 0.37 NIAGMN_14850 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECRC99 0.19 KEDOAH_13980 dsbA thiol:disulfide interchange protein DsbA 0.37 KEDOAH_11060 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECRC101 0.19 OKFHMN_14170 dsbA thiol:disulfide interchange protein DsbA 0.37 OKFHMN_17080 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli BW25113 0.19 b3860 dsbA periplasmic protein disulfide isomerase I (NCBI) 0.37 b3396 mrcA peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_04193 Thiol:disulfide interchange protein DsbA 0.37 OHPLBJKB_00307 Penicillin-binding protein 1A low > 73
Escherichia coli BL21 0.19 ECD_03746 periplasmic protein disulfide isomerase I 0.37 ECD_03248 penicillin-binding protein 1a, murein transglycosylase and transpeptidase low > 60
Alteromonas macleodii MIT1002 0.18 MIT1002_00714 Thiol:disulfide interchange protein DsbA precursor 0.38 MIT1002_00454 Penicillin-binding protein 1A — —
Dickeya dadantii 3937 0.18 DDA3937_RS00100 thiol:disulfide interchange protein DsbA 0.38 DDA3937_RS19580 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 74
Dickeya dianthicola ME23 0.18 DZA65_RS22240 thiol:disulfide interchange protein DsbA 0.37 DZA65_RS20795 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS21265 thiol:disulfide interchange protein DsbA 0.37 HGI48_RS19710 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.68 37

Not shown: 0 genomes with orthologs for PP_0127 only; 33 genomes with orthologs for PP_5084 only