Conservation of cofitness between PP_5104 and PP_2327 in Pseudomonas putida KT2440

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5104 thiazole synthase 1.0 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.55 15
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG 0.97 Pf6N2E2_2465 Cys regulon transcriptional activator CysB low > 103
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_13375 thiazole synthase 0.97 AO356_03180 CysB family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_08215 thiazole synthase 0.97 AO353_19060 CysB family transcriptional regulator low > 101
Pseudomonas sp. RS175 0.91 PFR28_04252 Thiazole synthase 0.96 PFR28_00966 HTH-type transcriptional regulator CysB low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4740 thiazole-phosphate synthase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4740 thiazole-phosphate synthase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG 0.96 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1000 Thiazole biosynthesis protein ThiG 0.97 PfGW456L13_2230 Cys regulon transcriptional activator CysB low > 87
Pseudomonas fluorescens SBW25 0.89 PFLU_RS28420 thiazole synthase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS28420 thiazole synthase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.40 18
Pseudomonas simiae WCS417 0.89 PS417_26775 thiazole synthase 0.96 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas sp. S08-1 0.87 OH686_14285 Thiazole synthase 0.93 OH686_01730 Cys regulon transcriptional activator CysB low > 80
Pseudomonas stutzeri RCH2 0.85 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis 0.91 Psest_2329 Transcriptional regulator low > 67
Lysobacter sp. OAE881 0.69 ABIE51_RS16545 thiazole synthase 0.34 ABIE51_RS15850 LysR family transcriptional regulator — —
Marinobacter adhaerens HP15 0.68 HP15_3274 thiazole synthase 0.80 HP15_1854 transcriptional regulator, LysR family — —
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS11645 thiazole synthase 0.37 ABZR86_RS05885 LysR substrate-binding domain-containing protein — —
Dechlorosoma suillum PS 0.66 Dsui_1014 putative enzyme of thiazole biosynthesis 0.52 Dsui_1988 transcriptional regulator — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG 0.30 Xcc-8004.1249.1 Transcriptional regulator low > 74
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_11895 thiS thiazole synthase 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator low > 52
Acinetobacter radioresistens SK82 0.65 MPMX26_01107 Thiazole synthase 0.40 MPMX26_02171 HTH-type transcriptional regulator SsuR low > 36
Castellaniella sp019104865 MT123 0.64 ABCV34_RS14510 thiazole synthase 0.37 ABCV34_RS08230 CysB family HTH-type transcriptional regulator — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS02130 thiazole synthase 0.47 HSERO_RS08245 CysB family transcriptional regulator low > 78
Pectobacterium carotovorum WPP14 0.37 HER17_RS20400 thiazole synthase 0.68 HER17_RS10870 HTH-type transcriptional regulator CysB 0.74 54
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_00355 thiazole synthase 0.70 CSW01_09545 HTH-type transcriptional regulator CysB — —
Rahnella sp. WP5 0.36 EX31_RS16795 thiazole synthase 0.68 EX31_RS09890 HTH-type transcriptional regulator CysB low > 89
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0291 thiazole-phosphate synthase 0.43 B158DRAFT_2455 Transcriptional regulator low > 40
Shewanella sp. ANA-3 0.36 Shewana3_1940 thiG thiazole synthase (RefSeq) 0.65 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Dickeya dianthicola ME23 0.36 DZA65_RS01195 thiazole synthase 0.68 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.65 54
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS04800 thiazole synthase 0.47 ABZR87_RS11555 CysB family HTH-type transcriptional regulator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4202 Thiazole biosynthesis protein ThiG 0.68 GFF2712 Cys regulon transcriptional activator CysB — —
Dickeya dadantii 3937 0.35 DDA3937_RS01155 thiazole synthase 0.68 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Ralstonia solanacearum PSI07 0.35 RPSI07_RS23435 thiazole synthase 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator — —
Escherichia coli ECOR38 0.35 HEPCGN_12030 thiG thiazole synthase 0.67 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS27930 thiazole synthase 0.48 QEN71_RS22570 CysB family HTH-type transcriptional regulator — —
Klebsiella michiganensis M5al 0.35 BWI76_RS01535 thiazole synthase 0.67 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Escherichia coli BW25113 0.35 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) 0.67 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS09925 thiazole synthase 0.46 RALBFv3_RS00100 CysB family HTH-type transcriptional regulator — —
Escherichia coli BL21 0.35 ECD_03867 thiamine biosynthesis ThiGH complex subunit 0.67 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Shewanella amazonensis SB2B 0.35 Sama_1856 thiG thiazole synthase (RefSeq) 0.66 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —
Escherichia coli ECRC101 0.35 MCAODC_03895 thiG thiazole synthase 0.67 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Ralstonia solanacearum UW163 0.35 UW163_RS03655 thiazole synthase 0.46 UW163_RS13430 CysB family HTH-type transcriptional regulator — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00093 Thiazole synthase 0.68 MIT1002_02005 Cys regulon transcriptional activator — —
Escherichia coli ECRC99 0.35 KEDOAH_14765 thiG thiazole synthase 0.67 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC98 0.35 JDDGAC_17020 thiG thiazole synthase 0.67 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_04060 Thiazole synthase 0.67 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Escherichia coli ECOR27 0.35 NOLOHH_05540 thiG thiazole synthase 0.67 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC62 0.35 BNILDI_05985 thiG thiazole synthase 0.67 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.35 OKFHMN_13395 thiG thiazole synthase 0.67 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Ralstonia solanacearum GMI1000 0.35 RS_RS00535 thiazole synthase 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator — —
Escherichia coli ECRC102 0.35 NIAGMN_11145 thiG thiazole synthase 0.67 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS17775 thiazole synthase 0.49 BPHYT_RS08810 CysB family transcriptional regulator — —
Escherichia fergusonii Becca 0.35 EFB2_04621 Thiazole synthase 0.67 EFB2_02652 HTH-type transcriptional regulator CysB — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis 0.67 EX28DRAFT_0946 Transcriptional regulator — —
Shewanella loihica PV-4 0.35 Shew_2092 thiazole biosynthesis family protein (RefSeq) 0.66 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella oneidensis MR-1 0.35 SO2441 thiG thiG protein (NCBI ptt file) 0.66 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.27 61
Paraburkholderia graminis OAS925 0.35 ABIE53_003714 thiazole synthase 0.49 ABIE53_001994 LysR family cys regulon transcriptional activator — —
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_05639 thiazole-phosphate synthase 0.49 H281DRAFT_00782 transcriptional regulator, LysR family — —
Dickeya dianthicola 67-19 0.35 HGI48_RS01150 thiazole synthase 0.69 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Variovorax sp. OAS795 0.34 ABID97_RS15315 thiazole synthase 0.46 ABID97_RS02980 CysB family HTH-type transcriptional regulator low > 91
Serratia liquefaciens MT49 0.34 IAI46_01300 thiazole synthase 0.68 IAI46_13965 HTH-type transcriptional regulator CysB — —
Escherichia coli Nissle 1917 0.34 ECOLIN_RS23020 thiazole synthase 0.67 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 52
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS01305 thiazole synthase 0.45 RR42_RS12245 transcriptional regulator — —
Enterobacter sp. TBS_079 0.34 MPMX20_00213 Thiazole synthase 0.67 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Erwinia tracheiphila SCR3 0.34 LU632_RS00950 thiazole synthase 0.67 LU632_RS12550 cysB HTH-type transcriptional regulator CysB — —
Variovorax sp. SCN45 0.34 GFF1188 Thiazole synthase (EC 2.8.1.10) 0.47 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF246 Thiazole biosynthesis protein ThiG 0.48 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI — —
Pantoea sp. MT58 0.31 IAI47_20700 thiazole synthase 0.67 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Acidovorax sp. GW101-3H11 0.31 Ac3H11_1059 Thiazole biosynthesis protein ThiG 0.44 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI — —

Not shown: 26 genomes with orthologs for PP_5104 only; 2 genomes with orthologs for PP_2327 only