Conservation of cofitness between PP_5028 and PP_2302 in Pseudomonas putida KT2440

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5028 proline iminopeptidase 1.0 PP_2302 DNA-binding, ATP-dependent protease 0.37 16
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_12300 proline iminopeptidase 0.94 AO353_20185 DNA-binding protein low > 101
Pseudomonas sp. RS175 0.83 PFR28_04976 Proline iminopeptidase 0.94 PFR28_01230 Lon protease low > 88
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3794 Proline iminopeptidase (EC 3.4.11.5) 0.94 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_09575 proline iminopeptidase 0.94 AO356_01740 DNA-binding protein low > 104
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_313 Proline iminopeptidase (EC 3.4.11.5) 0.94 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I low > 87
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1575 Proline iminopeptidase (EC 3.4.11.5) 0.94 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I
Pseudomonas sp. S08-1 0.79 OH686_10205 prolyl aminopeptidase 0.88 OH686_03635 endopeptidase La low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_0375 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 0.93 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_0375 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 0.93 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.32 83
Pseudomonas simiae WCS417 0.79 PS417_01780 proline iminopeptidase 0.94 PS417_17225 DNA-binding protein
Pseudomonas fluorescens SBW25 0.78 PFLU_RS01825 prolyl aminopeptidase 0.94 PFLU_RS19160 endopeptidase La low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS01825 prolyl aminopeptidase 0.94 PFLU_RS19160 endopeptidase La low > 109
Pseudomonas stutzeri RCH2 0.76 Psest_3951 proline iminopeptidase, Neisseria-type subfamily 0.90 Psest_2285 ATP-dependent protease La low > 67
Marinobacter adhaerens HP15 0.58 HP15_430 peptidase S33, proline iminopeptidase 1 0.73 HP15_2183 DNA-binding ATP-dependent protease La low > 73
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.4219.1 Proline iminopeptidase (EC 3.4.11.5) 0.66 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I low > 74
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS03175 prolyl aminopeptidase 0.67 LRK54_RS16735 endopeptidase La low > 59
Rhodanobacter denitrificans MT42 0.52 LRK55_RS02925 prolyl aminopeptidase 0.67 LRK55_RS16460 endopeptidase La low > 63
Lysobacter sp. OAE881 0.51 ABIE51_RS05500 prolyl aminopeptidase 0.67 ABIE51_RS14145 endopeptidase La low > 62
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS09625 prolyl aminopeptidase 0.67 ABZR86_RS07320 endopeptidase La low > 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_10045 pip prolyl aminopeptidase 0.67 OKGIIK_08030 lon endopeptidase La low > 52
Rhizobium sp. OAE497 0.49 ABIE40_RS06225 prolyl aminopeptidase 0.60 ABIE40_RS07100 endopeptidase La
Rahnella sp. WP5 0.48 EX31_RS24755 prolyl aminopeptidase 0.68 EX31_RS22255 endopeptidase La low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS06695 prolyl aminopeptidase 0.59 A4249_RS06460 endopeptidase La
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01285 proline iminopeptidase 0.61 CCNA_02037 ATP-dependent endopeptidase Lon
Caulobacter crescentus NA1000 0.48 CCNA_01285 proline iminopeptidase 0.61 CCNA_02037 ATP-dependent endopeptidase Lon low > 66
Sinorhizobium meliloti 1021 0.48 SMc02547 proline iminopeptidase 0.60 SMc01905 ATP-dependent protease LA protein
Agrobacterium fabrum C58 0.47 Atu1069 proline iminopeptidase 0.60 Atu1261 ATP-dependent protease LA
Ralstonia solanacearum PSI07 0.47 RPSI07_RS00655 prolyl aminopeptidase 0.68 RPSI07_RS16135 endopeptidase La
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS15995 proline iminopeptidase 0.67 HSERO_RS12905 peptidase
Variovorax sp. SCN45 0.47 GFF2633 Proline iminopeptidase (EC 3.4.11.5) 0.64 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I low > 127
Castellaniella sp019104865 MT123 0.47 ABCV34_RS09000 prolyl aminopeptidase 0.66 ABCV34_RS05125 endopeptidase La
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS16705 proline iminopeptidase 0.67 RR42_RS09030 DNA-binding protein
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_2484 proline iminopeptidase, Neisseria-type subfamily 0.57 Ga0059261_0102 endopeptidase La low > 68
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS22505 prolyl aminopeptidase 0.67 RALBFv3_RS01340 endopeptidase La
Ralstonia solanacearum UW163 0.47 UW163_RS23050 prolyl aminopeptidase 0.67 UW163_RS14650 endopeptidase La
Serratia liquefaciens MT49 0.47 IAI46_09990 prolyl aminopeptidase 0.68 IAI46_05020 endopeptidase La low > 86
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS16395 prolyl aminopeptidase 0.68 ABZR87_RS12785 endopeptidase La low > 80
Ralstonia solanacearum GMI1000 0.46 RS_RS18090 prolyl aminopeptidase 0.67 RS_RS08655 endopeptidase La
Azospirillum brasilense Sp245 0.45 AZOBR_RS00910 proline iminopeptidase 0.63 AZOBR_RS07145 peptidase low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_02763 Proline iminopeptidase 0.62 MPMX19_01545 Lon protease low > 112
Dinoroseobacter shibae DFL-12 0.44 Dshi_3551 proline iminopeptidase (RefSeq) 0.59 Dshi_1777 ATP-dependent protease La (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.44 PGA1_c34670 proline iminopeptidase Pip 0.59 PGA1_c20540 ATP-dependent protease La
Rhodospirillum rubrum S1H 0.40 Rru_A0084 Peptidase S33, proline iminopeptidase 1 (NCBI) 0.62 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.40 AMB_RS03080 prolyl aminopeptidase 0.63 AMB_RS14035 endopeptidase La low > 64
Alteromonas macleodii MIT1002 0.39 MIT1002_03674 Proline iminopeptidase 0.67 MIT1002_02757 Lon protease low > 70
Rhodopseudomonas palustris CGA009 0.34 TX73_018815 prolyl aminopeptidase 0.61 TX73_015345 endopeptidase La
Fusobacterium nucleatum SB010 0.34 HUW76_04605 prolyl aminopeptidase 0.43 HUW76_01065 endopeptidase La low > 35
Variovorax sp. OAS795 0.29 ABID97_RS12710 alpha/beta fold hydrolase 0.66 ABID97_RS17590 endopeptidase La
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_01329 prolyl aminopeptidase (EC:3.4.11.5). Serine peptidase. MEROPS family S33 0.67 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16
Shewanella oneidensis MR-1 0.21 SO4400 proline iminopeptidase, putative (NCBI ptt file) 0.68 SO1796 lon ATP-dependent protease La (NCBI ptt file) low > 76
Paraburkholderia graminis OAS925 0.21 ABIE53_005484 proline iminopeptidase 0.65 ABIE53_002117 ATP-dependent Lon protease
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS30235 alpha/beta fold hydrolase 0.67 QEN71_RS21975 endopeptidase La low > 153
Shewanella loihica PV-4 0.19 Shew_3544 alpha/beta hydrolase fold (RefSeq) 0.69 Shew_2506 ATP-dependent protease La (RefSeq)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF5402 Proline iminopeptidase (EC 3.4.11.5) 0.66 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I low > 90

Not shown: 0 genomes with orthologs for PP_5028 only; 43 genomes with orthologs for PP_2302 only