| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_0949 | | putative ATP-binding protein UPF0042 | 1.0 | PP_1317 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.35 | 16 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_07050 | | glmZ(sRNA)-inactivating NTPase | 0.86 | AO356_17065 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3270 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.86 | Pf6N2E2_5337 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_1083 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.86 | Pf1N1B4_962 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_05195 | | glmZ(sRNA)-inactivating NTPase | 0.87 | AO353_15245 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Pseudomonas sp. RS175 | 0.90 | PFR28_00170 | | RNase adapter protein RapZ | 0.86 | PFR28_03606 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Pseudomonas simiae WCS417 | 0.89 | PS417_04330 | | glmZ(sRNA)-inactivating NTPase | 0.85 | PS417_04155 | | ubiquinol-cytochrome C reductase | — | — |
| Pseudomonas fluorescens SBW25 | 0.89 | PFLU_RS04385 | | RNase adapter RapZ | 0.85 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.89 | PFLU_RS04385 | | RNase adapter RapZ | 0.85 | PFLU_RS04195 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 109 |
| Pseudomonas sp. S08-1 | 0.85 | OH686_08560 | | RNase adapter protein RapZ | 0.86 | OH686_08390 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | — | — |
| Pseudomonas stutzeri RCH2 | 0.84 | Psest_3316 | | Predicted P-loop-containing kinase | 0.84 | Psest_3279 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | — | — |
| Marinobacter adhaerens HP15 | 0.55 | HP15_2445 | | protein yhbJ | 0.65 | HP15_545 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_00824 | | glmZ(sRNA)-inactivating NTPase | 0.47 | MIT1002_00814 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 70 |
| Shewanella loihica PV-4 | 0.47 | Shew_3314 | | hypothetical protein (RefSeq) | 0.53 | Shew_0570 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.46 | Sama_3091 | | hypothetical protein (RefSeq) | 0.53 | Sama_3021 | | ubiquinol--cytochrome-c reductase (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.46 | CSW01_12830 | | RNase adaptor protein RapZ | 0.56 | CSW01_03045 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS02885 | | glmZ(sRNA)-inactivating NTPase | 0.43 | BPHYT_RS17630 | | ubiquinol-cytochrome C reductase | low | > 109 |
| Shewanella oneidensis MR-1 | 0.46 | SO3964 | | conserved hypothetical protein (NCBI ptt file) | 0.51 | SO0608 | petA | ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.46 | Shewana3_0669 | | hypothetical protein (RefSeq) | 0.50 | Shewana3_0601 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS01735 | | RNase adapter RapZ | 0.44 | QEN71_RS27785 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_01931 | | UPF0042 nucleotide-binding protein | 0.44 | H281DRAFT_05669 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_02250 | rapZ | RNase adapter RapZ | 0.56 | OKGIIK_03005 | petA | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS19800 | | RNase adapter RapZ | 0.54 | ABZR86_RS09880 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 74 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS02435 | | RNase adapter RapZ | 0.40 | UW163_RS06885 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS11145 | | RNase adapter RapZ | 0.40 | RALBFv3_RS06730 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS01995 | | RNase adaptor protein RapZ | 0.40 | RS_RS14675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.44 | 49 |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS22155 | | RNase adapter RapZ | 0.40 | RPSI07_RS10505 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS07035 | | RNase adapter RapZ | 0.40 | ABZR87_RS02385 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.59 | 16 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS12560 | | RNase adapter RapZ | 0.57 | LRK55_RS13480 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS12860 | | RNase adapter RapZ | 0.57 | LRK54_RS13765 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Lysobacter sp. OAE881 | 0.44 | ABIE51_RS15975 | | RNase adapter RapZ | 0.60 | ABIE51_RS15440 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 62 |
| Dechlorosoma suillum PS | 0.44 | Dsui_0990 | | putative P-loop-containing kinase | 0.51 | Dsui_1812 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | — | — |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_000714 | | UPF0042 nucleotide-binding protein | 0.44 | ABIE53_003685 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | low | > 113 |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_2077 | | Predicted P-loop-containing kinase | 0.54 | B158DRAFT_2100 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS02060 | | nucleotide-binding protein | 0.46 | RR42_RS18825 | | ubiquinol-cytochrome C reductase | 0.34 | 110 |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS19535 | | nucleotide-binding protein | 0.45 | HSERO_RS20245 | | ubiquinol-cytochrome C reductase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.40 | Xcc-8004.1658.1 | | hypothetical protein | 0.57 | Xcc-8004.2228.1 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 74 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF828 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.43 | GFF1295 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | — | — |
| Variovorax sp. SCN45 | 0.39 | GFF2356 | | RNase adapter protein RapZ | 0.50 | GFF6694 | | Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) | low | > 127 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS23710 | | RNase adapter RapZ | 0.49 | ABID97_RS22985 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | 0.43 | 29 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS14330 | | RNase adapter RapZ | 0.48 | ABCV34_RS12635 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A3448 | | Uncharacterized P-loop ATPase protein UPF0042 (NCBI) | 0.33 | Rru_A0364 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c01180 | | Predicted P-loop-containing kinase | 0.23 | PGA1_c34000 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_02622 | | Nucleotide-binding protein | 0.35 | MPMX19_05012 | | Ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Magnetospirillum magneticum AMB-1 | 0.33 | AMB_RS22235 | | RNase adaptor protein RapZ | 0.33 | AMB_RS20675 | | ubiquinol-cytochrome c reductase iron-sulfur subunit | — | — |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS30485 | | nucleotide-binding protein | 0.33 | AZOBR_RS20745 | | ubiquinol-cytochrome C reductase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.32 | Dshi_0209 | | hypothetical protein (RefSeq) | 0.25 | Dshi_3278 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.28 | Ga0059261_0917 | | Predicted P-loop-containing kinase | 0.25 | Ga0059261_3219 | | ubiquinol-cytochrome c reductase, iron-sulfur subunit | low | > 68 |
Not shown: 35 genomes with orthologs for PP_0949 only; 8 genomes with orthologs for PP_1317 only