Conservation of cofitness between MCAODC_06840 and MCAODC_09790 in Escherichia coli ECRC101

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_06840 chuU heme permease protein ChuU 1.0 MCAODC_09790 yqgE YqgE/AlgH family protein 0.53 9
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20060 heme ABC transporter permease ShuU/ChuU 0.89 ECOLIN_RS16400 YqgE/AlgH family protein low > 55
Escherichia coli ECRC98 1.00 JDDGAC_19955 chuU heme permease protein ChuU 1.00 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.51 59
Escherichia coli ECRC100 1.00 OKFHMN_16325 chuU heme permease protein ChuU 1.00 OKFHMN_19270 yqgE YqgE/AlgH family protein low > 80
Escherichia coli ECRC99 1.00 KEDOAH_11820 chuU heme permease protein ChuU 0.90 KEDOAH_08870 algH YqgE/AlgH family protein
Escherichia coli ECRC102 1.00 NIAGMN_14090 chuU heme permease protein ChuU 1.00 NIAGMN_17035 yqgE YqgE/AlgH family protein
Escherichia fergusonii Becca 0.99 EFB2_00303 Hemin transport system permease protein HmuU 1.00 EFB2_00954 hypothetical protein low > 86
Escherichia coli ECOR38 0.99 HEPCGN_15225 shuU heme ABC transporter permease ShuU/ChuU 1.00 HEPCGN_18575 yqgE YqgE/AlgH family protein low > 87
Erwinia tracheiphila SCR3 0.61 LU632_RS20345 iron ABC transporter permease 0.69 LU632_RS05475 YqgE/AlgH family protein low > 74
Rahnella sp. WP5 0.60 EX31_RS13960 iron ABC transporter permease 0.65 EX31_RS02670 YqgE/AlgH family protein low > 89
Serratia liquefaciens MT49 0.58 IAI46_11075 iron ABC transporter permease 0.64 IAI46_21395 YqgE/AlgH family protein low > 86
Pectobacterium carotovorum WPP14 0.55 HER17_RS08860 iron ABC transporter permease 0.64 HER17_RS02630 YqgE/AlgH family protein low > 75
Enterobacter sp. TBS_079 0.54 MPMX20_01915 Hemin transport system permease protein HmuU 0.78 MPMX20_03806 hypothetical protein low > 85
Pantoea sp. MT58 0.51 IAI47_03525 iron ABC transporter permease 0.68 IAI47_03610 YqgE/AlgH family protein low > 76
Klebsiella michiganensis M5al 0.49 BWI76_RS22470 transporter permease 0.80 BWI76_RS24080 DUF179 domain-containing protein low > 92
Dickeya dadantii 3937 0.39 DDA3937_RS06870 iron ABC transporter permease 0.66 DDA3937_RS18565 YqgE/AlgH family protein low > 74
Sinorhizobium meliloti 1021 0.38 SMc01511 hemin transport system permease transmembrane protein 0.30 SMc00019 hypothetical protein low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_3111 ABC-type Fe3+-siderophore transport system, permease component 0.18 Echvi_3442 Putative transcriptional regulator low > 79
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5165 Hemin ABC transporter, permease protein 0.37 Pf6N2E2_4609 UPF0301 protein YqgE low > 103
Pseudomonas fluorescens SBW25 0.35 PFLU_RS25690 iron ABC transporter permease 0.34 PFLU_RS28330 YqgE/AlgH family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS25690 iron ABC transporter permease 0.34 PFLU_RS28330 YqgE/AlgH family protein low > 109
Pseudomonas simiae WCS417 0.35 PS417_23850 ABC transporter permease 0.35 PS417_26685 hypothetical protein low > 88
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_18715 iron ABC transporter permease 0.47 CSW01_02485 YqgE/AlgH family protein low > 62
Pseudomonas stutzeri RCH2 0.34 Psest_1024 ABC-type Fe3+-siderophore transport system, permease component 0.36 Psest_0294 Putative transcriptional regulator low > 67
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_2867 Hemin ABC transporter, permease protein 0.38 Pf1N1B4_2350 UPF0301 protein YqgE low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_14445 ABC transporter permease 0.38 AO353_08120 hypothetical protein low > 101
Acidovorax sp. GW101-3H11 0.33 Ac3H11_227 Hemin ABC transporter, permease protein 0.41 Ac3H11_3981 UPF0301 protein YqgE low > 79
Bosea sp. OAE506 0.33 ABIE41_RS08180 iron chelate uptake ABC transporter family permease subunit 0.31 ABIE41_RS23005 YqgE/AlgH family protein low > 77
Dinoroseobacter shibae DFL-12 0.33 Dshi_0572 transport system permease protein (RefSeq) 0.34 Dshi_3083 protein of unknown function DUF179 (RefSeq) low > 64
Pseudomonas sp. RS175 0.32 PFR28_03709 Hemin transport system permease protein HmuU 0.36 PFR28_04234 hypothetical protein low > 88
Marinobacter adhaerens HP15 0.32 HP15_2998 hemin ABC transporter, permease protein 0.40 HP15_3510 transcriptional regulator low > 73
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_16120 ABC transporter permease 0.37 AO356_13465 hypothetical protein low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2478 Hemin ABC transporter, permease protein 0.39 GFF648 UPF0301 protein YqgE low > 90
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS04590 iron ABC transporter permease 0.41 ABZR86_RS10380 YqgE/AlgH family protein
Variovorax sp. SCN45 0.31 GFF2821 Hemin ABC transporter, permease protein 0.39 GFF2157 UPF0301 protein YqgE low > 127
Shewanella oneidensis MR-1 0.31 SO3674 hmuU hemin ABC transporter, permease protein (NCBI ptt file) 0.44 SO3346 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.30 Shewana3_3240 transport system permease protein (RefSeq) 0.46 Shewana3_1200 hypothetical protein (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_80 ABC transporter (iron.B12.siderophore.hemin) , permease component 0.38 PfGW456L13_1019 UPF0301 protein YqgE low > 87
Pseudomonas putida KT2440 0.29 PP_4688 Heme/hemin ABC transporter, permease protein 0.35 PP_4995 putative protein possibly involved in the control of exopolysaccharide production low > 96
Alteromonas macleodii MIT1002 0.28 MIT1002_01385 Hemin transport system permease protein HmuU 0.43 MIT1002_03056 hypothetical protein low > 70
Pseudomonas sp. S08-1 0.27 OH686_17300 Heme ABC transporter, permease protein HmuU 0.37 OH686_10925 UPF0301 protein YqgE low > 80
Escherichia coli BW25113 0.26 b4288 fecD KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) 0.89 b2948 yqgE orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.26 ECD_04154 ferric citrate ABC transporter permease 0.89 ECD_02778 uncharacterized protein low > 61
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_3095 transport system permease protein 0.34 Psyr_0485 Protein of unknown function DUF179 0.37 78
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_3095 transport system permease protein 0.34 Psyr_0485 Protein of unknown function DUF179 low > 86
Castellaniella sp019104865 MT123 0.24 ABCV34_RS11140 iron ABC transporter permease 0.34 ABCV34_RS10730 YqgE/AlgH family protein low > 48
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS16135 ABC transporter permease 0.38 RR42_RS15875 hypothetical protein low > 128
Dechlorosoma suillum PS 0.24 Dsui_0530 ABC-type Fe3+-siderophore transport system, permease component 0.41 Dsui_0593 putative transcriptional regulator low > 51
Azospirillum sp. SherDot2 0.23 MPMX19_05168 Hemin transport system permease protein HmuU 0.34 MPMX19_01077 hypothetical protein low > 112
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS25140 iron ABC transporter permease 0.36 QEN71_RS25795 YqgE/AlgH family protein low > 153
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS15500 iron ABC transporter permease 0.18 ABI39_RS14885 YqgE/AlgH family protein low > 72
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS01565 iron ABC transporter permease 0.18 HMPREF1058_RS18575 YqgE/AlgH family protein low > 67
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_0623 ABC-type Fe3+-siderophore transport system, permease component 0.29 Ga0059261_4015 Putative transcriptional regulator low > 68
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_01250 FecCD-family transporter protein 0.32 CCNA_03506 putative transcriptional regulator low > 67
Caulobacter crescentus NA1000 0.22 CCNA_01250 FecCD-family transporter protein 0.32 CCNA_03506 putative transcriptional regulator low > 66
Rhodospirillum rubrum S1H 0.22 Rru_A1137 transport system permease protein (NCBI) 0.35 Rru_A3059 Protein of unknown function DUF179 (NCBI) low > 58
Shewanella loihica PV-4 0.22 Shew_0713 transport system permease protein (RefSeq) 0.43 Shew_1144 hypothetical protein (RefSeq) low > 60
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00137 iron complex transport system permease protein 0.35 H281DRAFT_04814 putative transcriptional regulator low > 103
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS04855 iron ABC transporter 0.35 BPHYT_RS04220 hypothetical protein low > 109
Shewanella amazonensis SB2B 0.21 Sama_0761 iron-compound ABC transporter, permease protein (RefSeq) 0.43 Sama_2472 putative transcriptional regulator (RefSeq) low > 62
Paraburkholderia graminis OAS925 0.20 ABIE53_001247 iron complex transport system permease protein 0.36 ABIE53_001128 putative transcriptional regulator low > 113
Variovorax sp. OAS795 0.20 ABID97_RS17405 iron ABC transporter permease 0.39 ABID97_RS24675 YqgE/AlgH family protein
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS05460 iron ABC transporter permease 0.28 A4249_RS00260 YqgE/AlgH family protein low > 48
Acinetobacter radioresistens SK82 0.16 MPMX26_01195 Petrobactin import system permease protein YclN 0.31 MPMX26_00238 hypothetical protein

Not shown: 10 genomes with orthologs for MCAODC_06840 only; 25 genomes with orthologs for MCAODC_09790 only