Conservation of cofitness between JDDGAC_25110 and JDDGAC_14855 in Escherichia coli ECRC98

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.0 JDDGAC_14855 yjjV metal-dependent hydrolase 0.61 14
Escherichia coli ECRC100 1.00 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 OKFHMN_11260 yjjV metal-dependent hydrolase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 KEDOAH_16885 yjjV metal-dependent hydrolase
Escherichia coli ECOR38 1.00 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.94 HEPCGN_09265 tatD metal-dependent hydrolase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01145 Ferredoxin YfhL 0.97 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NIAGMN_09110 yjjV metal-dependent hydrolase
Escherichia coli ECRC101 1.00 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 MCAODC_01775 yjjV metal-dependent hydrolase low > 87
Escherichia fergusonii Becca 0.99 EFB2_01334 Ferredoxin YfhL 0.94 EFB2_04068 putative metal-dependent hydrolase YjjV low > 86
Escherichia coli BW25113 0.99 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) 0.93 b4378 yjjV predicted DNase (NCBI) low > 76
Escherichia coli BL21 0.99 ECD_02456 putative 4Fe-4S cluster-containing protein 0.93 ECD_04254 putative DNase low > 61
Escherichia coli ECRC62 0.99 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.95 BNILDI_08020 tatD metal-dependent hydrolase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL 0.95 NOLOHH_03580 yjjV metal-dependent hydrolase low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL 0.95 ECOLIN_RS25130 metal-dependent hydrolase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding 0.71 GFF1040 Putative deoxyribonuclease YjjV low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0084 4Fe-4S dicluster domain 0.70 EX28DRAFT_3587 Mg-dependent DNase
Enterobacter sp. TBS_079 0.93 MPMX20_03433 Ferredoxin YfhL 0.71 MPMX20_00677 putative metal-dependent hydrolase YjjV low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS21295 ferredoxin 0.73 BWI76_RS04120 metal-dependent hydrolase
Serratia liquefaciens MT49 0.84 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin 0.62 IAI46_02900 TatD family hydrolase low > 86
Pectobacterium carotovorum WPP14 0.83 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.59 HER17_RS19045 TatD family hydrolase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin 0.57 HGI48_RS02415 TatD family hydrolase low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin 0.56 DDA3937_RS02460 TatD family hydrolase low > 74
Dickeya dianthicola ME23 0.80 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.57 DZA65_RS02520 metal-dependent hydrolase low > 75
Rahnella sp. WP5 0.80 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin 0.54 EX31_RS04070 deoxyribonuclease YjjV low > 89
Erwinia tracheiphila SCR3 0.78 LU632_RS15360 YfhL family 4Fe-4S dicluster ferredoxin 0.61 LU632_RS02510 TatD family hydrolase
Pantoea sp. MT58 0.76 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin 0.64 IAI47_03395 metal-dependent hydrolase low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03745 ferredoxin 0.44 CSW01_11925 TatD family deoxyribonuclease low > 62
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS02000 ferredoxin 0.29 RR42_RS06110 DNAase
Dechlorosoma suillum PS 0.60 Dsui_1029 hypothetical protein 0.27 Dsui_0503 Mg-dependent DNase
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS11080 4Fe-4S dicluster domain-containing protein 0.31 RALBFv3_RS14760 TatD family deoxyribonuclease
Ralstonia solanacearum PSI07 0.60 RPSI07_RS22220 4Fe-4S dicluster domain-containing protein 0.31 RPSI07_RS18600 TatD family deoxyribonuclease
Ralstonia solanacearum UW163 0.60 UW163_RS02500 4Fe-4S dicluster domain-containing protein 0.31 UW163_RS12230 TatD family deoxyribonuclease
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4828 Ferredoxin 0.31 Ac3H11_1737 Putative deoxyribonuclease YjjV low > 79
Shewanella oneidensis MR-1 0.59 SO1251 ferredoxin, 4Fe-4S (NCBI ptt file) 0.31 SO1213 hydrolase, TatD family (NCBI ptt file)
Shewanella sp. ANA-3 0.58 Shewana3_1067 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.33 Shewana3_1038 TatD-related deoxyribonuclease (RefSeq)
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS06970 YfhL family 4Fe-4S dicluster ferredoxin 0.30 ABZR87_RS10420 TatD family hydrolase low > 80
Ralstonia solanacearum GMI1000 0.58 RS_RS01930 4Fe-4S dicluster domain-containing protein 0.31 RS_RS05570 TatD family deoxyribonuclease
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin 0.33 QEN71_RS05855 TatD family hydrolase low > 153
Shewanella amazonensis SB2B 0.58 Sama_1002 ferredoxin, 4Fe-4S (RefSeq) 0.24 Sama_0970 TatD-related deoxyribonuclease (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.33 Psyr_0819 TatD-related deoxyribonuclease
Alteromonas macleodii MIT1002 0.57 MIT1002_02343 putative ferredoxin-like protein 0.32 MIT1002_02710 putative deoxyribonuclease YjjV low > 70
Shewanella loihica PV-4 0.57 Shew_2785 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.26 Shew_2818 TatD-related deoxyribonuclease (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.33 Psyr_0819 TatD-related deoxyribonuclease
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS20685 ferredoxin 0.33 HSERO_RS13935 DNAase
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_01943 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 0.32 H281DRAFT_00492 TatD DNase family protein low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_000703 ferredoxin 0.33 ABIE53_002767 TatD DNase family protein low > 113
Acinetobacter radioresistens SK82 0.56 MPMX26_00739 Ferredoxin 0.26 MPMX26_00479 putative metal-dependent hydrolase YjjV low > 36
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS02825 ferredoxin 0.29 BPHYT_RS12705 DNAase low > 109
Pseudomonas sp. S08-1 0.54 OH686_14145 Uncharacterized ferredoxin-like protein YfhL 0.35 OH686_16550 Putative deoxyribonuclease YjjV low > 80
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_13280 ferredoxin 0.33 AO356_07345 hydrolase TatD
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_0772 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 0.34 B158DRAFT_2240 Mg-dependent DNase
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4571 4Fe-4S ferredoxin, iron-sulfur binding 0.35 Pf6N2E2_3341 Putative deoxyribonuclease YjjV
Pseudomonas sp. RS175 0.54 PFR28_04270 Ferredoxin 0.35 PFR28_00103 putative metal-dependent hydrolase YjjV
Pseudomonas putida KT2440 0.54 PP_5124 putative 4Fe-4S cluster-containing protein 0.30 PP_0791 putative hydrolase
Pseudomonas simiae WCS417 0.53 PS417_26865 ferredoxin 0.33 PS417_03955 hydrolase TatD
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding 0.34 Pf1N1B4_1148 Putative deoxyribonuclease YjjV
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.34 PFLU_RS04000 TatD family hydrolase
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.34 PFLU_RS04000 TatD family hydrolase low > 109
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_980 4Fe-4S ferredoxin, iron-sulfur binding 0.34 PfGW456L13_5078 Putative deoxyribonuclease YjjV
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08310 ferredoxin 0.33 AO353_05495 hydrolase TatD
Pseudomonas stutzeri RCH2 0.51 Psest_0243 hypothetical protein 0.36 Psest_0728 hydrolase, TatD family low > 67
Variovorax sp. SCN45 0.51 GFF2345 Uncharacterized ferredoxin-like protein YfhL 0.28 GFF6080 Putative deoxyribonuclease YjjV low > 127
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS13355 YfhL family 4Fe-4S dicluster ferredoxin 0.35 LRK54_RS16135 TatD family hydrolase low > 59
Lysobacter sp. OAE881 0.48 ABIE51_RS15110 YfhL family 4Fe-4S dicluster ferredoxin 0.38 ABIE51_RS12580 TatD family hydrolase
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02595 nuoI Ferredoxin 0.32 OKGIIK_08515 DNAase low > 52
Rhodanobacter denitrificans MT42 0.48 LRK55_RS13095 YfhL family 4Fe-4S dicluster ferredoxin 0.34 LRK55_RS15885 TatD family hydrolase low > 63
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS20005 YfhL family 4Fe-4S dicluster ferredoxin 0.34 ABZR86_RS06375 TatD family hydrolase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.2157.1 4Fe-4S ferredoxin, iron-sulfur binding 0.32 Xcc-8004.3493.1 Putative deoxyribonuclease YjjV
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_00950 ferredoxin 0.23 CA264_03915 hydrolase TatD
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2528 hypothetical protein 0.25 Echvi_0081 hydrolase, TatD family

Not shown: 3 genomes with orthologs for JDDGAC_25110 only; 4 genomes with orthologs for JDDGAC_14855 only