Conservation of cofitness between IAI47_11310 and IAI47_13150 in Pantoea sp. MT58

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_11310 redox-regulated ATPase YchF 1.0 IAI47_13150 ABC-F family ATPase 0.35 19
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.90 GFF717 Putative ATPase component of ABC transporter with duplicated ATPase domain low > 78
Dickeya dianthicola ME23 0.94 DZA65_RS11435 redox-regulated ATPase YchF 0.88 DZA65_RS14910 ABC-F family ATPase low > 75
Dickeya dianthicola 67-19 0.94 HGI48_RS10975 redox-regulated ATPase YchF 0.88 HGI48_RS14235 ABC-F family ATPase low > 71
Dickeya dadantii 3937 0.94 DDA3937_RS11035 redox-regulated ATPase YchF 0.88 DDA3937_RS14260 ABC-F family ATPase 0.51 42
Erwinia tracheiphila SCR3 0.94 LU632_RS13950 ychF redox-regulated ATPase YchF 0.91 LU632_RS09525 ABC-F family ATPase low > 74
Escherichia coli ECRC102 0.93 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.92 NIAGMN_04205 ybiT ABC-F family ATPase — —
Escherichia coli ECRC99 0.93 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.92 KEDOAH_21750 ybiT ABC-F family ATPase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.92 OHPLBJKB_02893 putative ABC transporter ATP-binding protein YbiT low > 73
Escherichia coli ECOR27 0.93 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.92 NOLOHH_22510 ybiT ABC-F family ATPase — —
Escherichia coli ECRC101 0.93 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.92 OKFHMN_06160 ybiT ABC-F family ATPase — —
Escherichia coli ECRC101 0.93 MCAODC_21850 ychF redox-regulated ATPase YchF 0.92 MCAODC_25375 ybiT ABC-F family ATPase — —
Escherichia coli ECOR38 0.93 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.92 HEPCGN_01880 ybiT ABC-F family ATPase — —
Escherichia coli BW25113 0.93 b1203 ychF translation-associated GTPase (NCBI) 0.92 b0820 ybiT fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) — —
Escherichia coli ECRC98 0.93 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.92 JDDGAC_09795 ybiT ABC-F family ATPase — —
Escherichia coli Nissle 1917 0.93 ECOLIN_RS07280 redox-regulated ATPase YchF 0.92 ECOLIN_RS04370 ABC-F family ATPase — —
Escherichia fergusonii Becca 0.93 EFB2_02724 Ribosome-binding ATPase YchF 0.92 EFB2_03285 putative ABC transporter ATP-binding protein YbiT low > 86
Escherichia coli ECRC62 0.93 BNILDI_18805 ychF redox-regulated ATPase YchF 0.92 BNILDI_20790 ybiT ABC-F family ATPase — —
Escherichia coli BL21 0.93 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 0.92 ECD_00787 ABC-F family putative regulatory ATPase — —
Pectobacterium carotovorum WPP14 0.93 HER17_RS10445 redox-regulated ATPase YchF 0.88 HER17_RS07215 ABC-F family ATPase low > 75
Serratia liquefaciens MT49 0.91 IAI46_10240 redox-regulated ATPase YchF 0.88 IAI46_07820 ABC-F family ATPase — —
Rahnella sp. WP5 0.90 EX31_RS07380 redox-regulated ATPase YchF 0.88 EX31_RS18775 ABC-F family ATPase low > 89
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0821 GTP-binding protein YchF 0.91 EX28DRAFT_2147 ATPase components of ABC transporters with duplicated ATPase domains — —
Enterobacter sp. TBS_079 0.89 MPMX20_02645 Ribosome-binding ATPase YchF 0.92 MPMX20_01457 putative ABC transporter ATP-binding protein YbiT low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS17485 GTP-binding protein YchF 0.92 BWI76_RS09040 ABC-F family ATPase — —
Shewanella amazonensis SB2B 0.81 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.81 Sama_1386 ABC transporter, ATP-binding protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.81 MIT1002_01504 Ribosome-binding ATPase YchF 0.66 MIT1002_00912 putative ABC transporter ATP-binding protein YheS low > 70
Shewanella oneidensis MR-1 0.80 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) 0.78 SO1690 ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.78 Shewana3_2760 ABC transporter related (RefSeq) low > 73
Shewanella loihica PV-4 0.78 Shew_2919 translation-associated GTPase (RefSeq) 0.81 Shew_1676 ABC transporter-related protein (RefSeq) — —
Marinobacter adhaerens HP15 0.75 HP15_704 translation-associated GTPase 0.76 HP15_2628 ABC transporter ATP-binding protein-like protein low > 73
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_10875 redox-regulated ATPase YchF 0.78 CSW01_07630 ABC-F family ATPase low > 62
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS18365 GTP-binding protein 0.68 RR42_RS11370 ABC transporter ATP-binding protein low > 128
Pseudomonas sp. S08-1 0.73 OH686_07965 GTP-binding and nucleic acid-binding protein YchF 0.77 OH686_00750 Bis-ABC ATPase YbiT low > 80
Pseudomonas putida KT2440 0.73 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.78 PP_2936 putative ATP-binding component of a transport system low > 96
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_14740 GTP-binding protein 0.73 AO353_26510 ABC transporter ATP-binding protein low > 101
Pseudomonas stutzeri RCH2 0.72 Psest_1103 GTP-binding protein YchF 0.78 Psest_2115 ATPase components of ABC transporters with duplicated ATPase domains low > 67
Pseudomonas sp. RS175 0.72 PFR28_03664 Ribosome-binding ATPase YchF 0.77 PFR28_01696 putative ABC transporter ATP-binding protein YbiT low > 88
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.73 Pf1N1B4_4749 ABC transporter ATP-binding protein uup low > 87
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.77 PfGW456L13_3023 ABC transporter ATP-binding protein uup low > 87
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS27600 redox-regulated ATPase YchF 0.66 QEN71_RS07090 ABC-F family ATPase 0.84 18
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_16450 GTP-binding protein 0.74 AO356_27740 ABC transporter ATP-binding protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_0941 Conserved hypothetical protein 92 0.73 Psyr_2495 ABC transporter low > 86
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_0941 Conserved hypothetical protein 92 0.73 Psyr_2495 ABC transporter low > 86
Pseudomonas simiae WCS417 0.71 PS417_03560 GTP-binding protein 0.77 PS417_13100 ABC transporter ATP-binding protein low > 88
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS02220 redox-regulated ATPase YchF 0.68 ABZR87_RS12165 ABC-F family ATPase 0.60 54
Ralstonia solanacearum GMI1000 0.71 RS_RS14520 redox-regulated ATPase YchF 0.68 RS_RS07315 ABC-F family ATPase low > 80
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS17445 GTP-binding protein YchF 0.67 BPHYT_RS11480 heme ABC transporter ATP-binding protein 0.43 108
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_05705 hypothetical protein 0.67 H281DRAFT_05171 ATPase components of ABC transporters with duplicated ATPase domains low > 103
Paraburkholderia graminis OAS925 0.71 ABIE53_003650 GTP-binding protein YchF 0.67 ABIE53_002379 ATPase subunit of ABC transporter with duplicated ATPase domains 0.43 61
Castellaniella sp019104865 MT123 0.70 ABCV34_RS09215 redox-regulated ATPase YchF 0.67 ABCV34_RS03000 ABC-F family ATPase — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.77 PFLU_RS13740 ABC-F family ATPase low > 109
Pseudomonas fluorescens SBW25 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.77 PFLU_RS13740 ABC-F family ATPase low > 109
Ralstonia solanacearum UW163 0.70 UW163_RS07055 redox-regulated ATPase YchF 0.67 UW163_RS13965 ABC-F family ATPase — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS06570 redox-regulated ATPase YchF 0.67 RALBFv3_RS00635 ABC-F family ATPase low > 76
Ralstonia solanacearum PSI07 0.69 RPSI07_RS10660 redox-regulated ATPase YchF 0.68 RPSI07_RS16870 ABC-F family ATPase low > 81
Dechlorosoma suillum PS 0.69 Dsui_1039 GTP-binding protein YchF 0.68 Dsui_0753 ATPase component of ABC transporters with duplicated ATPase domain — —
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS20405 GTP-binding protein YchF 0.71 HSERO_RS11060 ABC transporter ATP-binding protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.60 CA264_07495 GTP-binding protein YchF 0.46 CA264_06580 ABC-F family ATPase low > 74
Fusobacterium nucleatum SB010 0.58 HUW76_08540 redox-regulated ATPase YchF 0.43 HUW76_03735 ATP-binding cassette domain-containing protein low > 35
Mucilaginibacter yixingensis YX-36 DSM 26809 0.58 ABZR88_RS14155 redox-regulated ATPase YchF 0.45 ABZR88_RS07070 ABC-F family ATP-binding cassette domain-containing protein low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.58 Echvi_2525 GTP-binding protein YchF 0.41 Echvi_3351 ATPase components of ABC transporters with duplicated ATPase domains 0.45 21
Bacteroides ovatus ATCC 8483 0.57 BACOVA_02821 GTP-binding protein YchF 0.42 BACOVA_00551 ABC transporter, ATP-binding protein — —
Bacteroides thetaiotaomicron VPI-5482 0.57 BT3116 GTP-binding protein (NCBI ptt file) 0.42 BT1242 ABC transporter ATP-binding protein (NCBI ptt file) — —
Parabacteroides merdae CL09T00C40 0.57 HMPREF1078_RS06345 redox-regulated ATPase YchF 0.43 HMPREF1078_RS15635 ATP-binding cassette domain-containing protein low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.57 CA265_RS13275 redox-regulated ATPase YchF 0.43 CA265_RS12875 ABC-F family ATPase low > 88
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS05450 redox-regulated ATPase YchF 0.41 ABI39_RS11680 ATP-binding cassette domain-containing protein low > 72
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS11490 redox-regulated ATPase YchF 0.42 HMPREF1058_RS15690 ATP-binding cassette domain-containing protein low > 67
Bacteroides stercoris CC31F 0.52 HMPREF1181_RS02000 redox-regulated ATPase YchF 0.42 HMPREF1181_RS04050 ATP-binding cassette domain-containing protein low > 56
Mycobacterium tuberculosis H37Rv 0.43 Rv1112 Probable GTP binding protein 0.21 Rv1473 Probable macrolide-transport ATP-binding protein ABC transporter — —

Not shown: 31 genomes with orthologs for IAI47_11310 only; 1 genomes with orthologs for IAI47_13150 only