Conservation of cofitness between IAI46_01315 and IAI46_03990 in Serratia liquefaciens MT49

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_01315 thiamine phosphate synthase 1.0 IAI46_03990 polyphenol oxidase 0.47 16
Rahnella sp. WP5 0.77 EX31_RS16810 thiamine phosphate synthase 0.64 EX31_RS07565 polyphenol oxidase low > 89
Pectobacterium carotovorum WPP14 0.77 HER17_RS20385 thiamine phosphate synthase 0.64 HER17_RS05405 polyphenol oxidase low > 75
Dickeya dadantii 3937 0.75 DDA3937_RS01170 thiamine phosphate synthase 0.66 DDA3937_RS16105 polyphenol oxidase low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS01165 thiamine phosphate synthase 0.65 HGI48_RS16230 polyphenol oxidase low > 71
Enterobacter sp. TBS_079 0.73 MPMX20_00216 Thiamine-phosphate synthase 0.66 MPMX20_03462 Polyphenol oxidase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4199 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.69 GFF4183 COG1496: Uncharacterized conserved protein low > 78
Klebsiella michiganensis M5al 0.73 BWI76_RS01550 thiamine phosphate synthase 0.67 BWI76_RS21445 hypothetical protein low > 92
Escherichia coli ECRC102 0.73 NIAGMN_11130 thiE thiamine phosphate synthase 0.67 NIAGMN_19025 yfiH purine nucleoside phosphorylase YfiH — —
Escherichia coli ECRC99 0.73 KEDOAH_14780 thiE thiamine phosphate synthase 0.67 KEDOAH_06965 yfiH purine nucleoside phosphorylase YfiH — —
Escherichia coli ECRC98 0.73 JDDGAC_17005 thiE thiamine phosphate synthase 0.67 JDDGAC_24920 yfiH purine nucleoside phosphorylase YfiH — —
Escherichia fergusonii Becca 0.73 EFB2_04618 Thiamine-phosphate synthase 0.67 EFB2_01297 Polyphenol oxidase low > 86
Escherichia coli ECRC101 0.73 MCAODC_03880 thiE thiamine phosphate synthase 0.67 MCAODC_11785 yfiH purine nucleoside phosphorylase YfiH — —
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4535 thiamine-phosphate diphosphorylase 0.67 EX28DRAFT_2694 YfiH family protein low > 76
Escherichia coli Nissle 1917 0.72 ECOLIN_RS23035 thiamine phosphate synthase 0.67 ECOLIN_RS14670 purine nucleoside phosphorylase YfiH low > 52
Escherichia coli ECRC101 0.72 OKFHMN_13380 thiE thiamine phosphate synthase 0.67 OKFHMN_21255 yfiH purine nucleoside phosphorylase YfiH — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_04057 Thiamine-phosphate synthase 0.67 OHPLBJKB_01113 Polyphenol oxidase low > 73
Escherichia coli ECOR38 0.72 HEPCGN_12015 thiE thiamine phosphate synthase 0.67 HEPCGN_20380 yfiH purine nucleoside phosphorylase YfiH low > 85
Escherichia coli BW25113 0.72 b3993 thiE thiamine-phosphate pyrophosphorylase (NCBI) 0.67 b2593 yfiH hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.72 NOLOHH_05525 thiE thiamine phosphate synthase 0.67 NOLOHH_12930 yfiH purine nucleoside phosphorylase YfiH low > 57
Escherichia coli BL21 0.72 ECD_03870 thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) 0.67 ECD_02483 UPF0124 family protein low > 60
Escherichia coli ECRC62 0.72 BNILDI_06000 thiE thiamine phosphate synthase 0.66 BNILDI_11735 yfiH purine nucleoside phosphorylase YfiH — —
Dickeya dianthicola ME23 0.71 DZA65_RS01210 thiamine phosphate synthase 0.64 DZA65_RS17325 polyphenol oxidase low > 75
Pantoea sp. MT58 0.71 IAI47_18090 thiamine phosphate synthase 0.62 IAI47_04430 polyphenol oxidase low > 76
Erwinia tracheiphila SCR3 0.68 LU632_RS00965 thiE thiamine phosphate synthase 0.60 LU632_RS16940 pgeF polyphenol oxidase low > 74
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS17770 thiamine-phosphate pyrophosphorylase 0.39 BPHYT_RS09140 laccase — —
Rhodopseudomonas palustris CGA009 0.40 TX73_018535 thiamine phosphate synthase 0.21 TX73_022600 peptidoglycan editing factor PgeF — —
Dinoroseobacter shibae DFL-12 0.40 Dshi_0911 Thiamine-phosphate diphosphorylase (RefSeq) 0.24 Dshi_2651 protein of unknown function DUF152 (RefSeq) low > 64
Bosea sp. OAE506 0.38 ABIE41_RS20180 thiamine phosphate synthase 0.23 ABIE41_RS11450 peptidoglycan editing factor PgeF — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c09050 thiamine-phosphate pyrophosphorylase ThiE 0.26 PGA1_c24750 uncharacterized protein, YfiH family low > 62
Sinorhizobium meliloti 1021 0.35 SM_b20618 thiamine-phosphate pyrophosphorylase 0.23 SMc02683 hypothetical protein low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU2091 thiE-1 thiamine-phosphate pyrophosphorylase (TIGR) 0.22 DVU0365 conserved hypothetical protein (TIGR) low > 55
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS03290 thiamine phosphate synthase 0.22 HMPREF1058_RS00725 peptidoglycan editing factor PgeF low > 67
Azospirillum brasilense Sp245 0.19 AZOBR_RS10400 thiamine-phosphate synthase 0.22 AZOBR_RS31175 polyphenol oxidase — —
Lysobacter sp. OAE881 0.19 ABIE51_RS17410 thiamine phosphate synthase 0.51 ABIE51_RS04890 peptidoglycan editing factor PgeF — —
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS17410 thiamine phosphate synthase 0.41 ABZR86_RS10960 peptidoglycan editing factor PgeF — —
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_0797 thiamine-phosphate pyrophosphorylase (RefSeq) 0.21 DvMF_2317 protein of unknown function DUF152 (RefSeq) low > 51
Mycobacterium tuberculosis H37Rv 0.19 Rv0414c Thiamine-phosphate pyrophosphorylase ThiE (TMP pyrophosphorylase) (TMP-PPASE) (thiamine-phosphate synthase) 0.22 Rv2149c Conserved protein YfiH — —
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_06355 thiamine-phosphate pyrophosphorylase 0.50 AO353_14225 laccase low > 101
Dechlorosoma suillum PS 0.18 Dsui_0663 thiamine-phosphate pyrophosphorylase 0.53 Dsui_2531 uncharacterized protein, YfiH family — —
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_1384 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.51 PfGW456L13_1494 COG1496: Uncharacterized conserved protein low > 87
Pseudomonas sp. RS175 0.18 PFR28_03844 Thiamine-phosphate synthase 0.52 PFR28_03747 Polyphenol oxidase low > 88
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_2717 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.51 Pf1N1B4_2823 COG1496: Uncharacterized conserved protein — —
Rhizobium sp. OAE497 0.18 ABIE40_RS25925 thiamine phosphate synthase 0.23 ABIE40_RS13030 peptidoglycan editing factor PgeF low > 107
Magnetospirillum magneticum AMB-1 0.18 AMB_RS14385 thiamine phosphate synthase 0.25 AMB_RS03060 peptidoglycan editing factor PgeF — —
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_4341 thiamine-phosphate diphosphorylase 0.50 Psyr_0727 Protein of unknown function DUF152 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_4341 thiamine-phosphate diphosphorylase 0.50 Psyr_0727 Protein of unknown function DUF152 low > 86
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS17750 thiamine phosphate synthase 0.22 ABI39_RS08330 peptidoglycan editing factor PgeF low > 72
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_5023 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.51 Pf6N2E2_5128 COG1496: Uncharacterized conserved protein low > 103
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_03373 thiamin-phosphate pyrophosphorylase 0.25 CCNA_00523 multicopper polyphenol oxidase — —
Caulobacter crescentus NA1000 0.17 CCNA_03373 thiamin-phosphate pyrophosphorylase 0.25 CCNA_00523 multicopper polyphenol oxidase — —
Pseudomonas sp. S08-1 0.17 OH686_09190 Thiamin-phosphate pyrophosphorylase 0.52 OH686_16415 Multicopper polyphenol oxidase low > 80
Pseudomonas fluorescens SBW25 0.17 PFLU_RS26535 thiamine phosphate synthase 0.51 PFLU_RS03875 peptidoglycan editing factor PgeF low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS26535 thiamine phosphate synthase 0.51 PFLU_RS03875 peptidoglycan editing factor PgeF low > 109
Pseudomonas simiae WCS417 0.17 PS417_24605 thiamine-phosphate pyrophosphorylase 0.51 PS417_03825 laccase low > 88
Castellaniella sp019104865 MT123 0.17 ABCV34_RS10745 thiamine phosphate synthase 0.36 ABCV34_RS01890 peptidoglycan editing factor PgeF — —
Azospirillum sp. SherDot2 0.17 MPMX19_00683 Thiamine-phosphate synthase 0.23 MPMX19_01826 Polyphenol oxidase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.17 A4249_RS08810 thiamine phosphate synthase 0.21 A4249_RS09865 peptidoglycan editing factor PgeF — —
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_17095 Thiamine-phosphate synthase 0.41 OKGIIK_01795 pgeF peptidoglycan editing factor PgeF low > 52
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_15430 thiamine-phosphate pyrophosphorylase 0.52 AO356_15930 laccase 0.20 83
Agrobacterium fabrum C58 0.17 Atu3289 thiamine-phosphate pyrophosphorylase 0.23 Atu2215 hypothetical protein low > 89
Pseudomonas stutzeri RCH2 0.16 Psest_0536 thiamine-phosphate pyrophosphorylase 0.49 Psest_0710 uncharacterized protein, YfiH family — —
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS02140 thiamine-phosphate synthase 0.43 HSERO_RS15065 laccase low > 78
Pseudomonas putida KT2440 0.16 PP_4783 Thiamine-phosphate synthase 0.51 PP_0624 Uncharacterized protein YfiH — —
Bacteroides thetaiotaomicron VPI-5482 0.16 BT0652 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) 0.17 BT4389 conserved hypothetical protein (NCBI ptt file) low > 81
Rhodanobacter denitrificans MT42 0.16 LRK55_RS06320 thiamine phosphate synthase 0.42 LRK55_RS04740 peptidoglycan editing factor PgeF low > 63
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS06575 thiamine phosphate synthase 0.42 LRK54_RS04960 peptidoglycan editing factor PgeF low > 59
Bacteroides ovatus ATCC 8483 0.15 BACOVA_02360 thiamine-phosphate diphosphorylase 0.20 BACOVA_05224 conserved hypothetical protein, YfiH family low > 94
Bacteroides stercoris CC31F 0.13 HMPREF1181_RS14675 thiamine phosphate synthase 0.22 HMPREF1181_RS06290 peptidoglycan editing factor PgeF low > 56
Marinobacter adhaerens HP15 0.13 HP15_348 thiamine-phosphate pyrophosphorylase 0.46 HP15_528 multi-copper polyphenol oxidoreductase, laccase — —
Acinetobacter radioresistens SK82 0.13 MPMX26_01022 Thiamine-phosphate synthase 0.32 MPMX26_00736 Polyphenol oxidase — —

Not shown: 6 genomes with orthologs for IAI46_01315 only; 24 genomes with orthologs for IAI46_03990 only