Conservation of cofitness between HSERO_RS20770 and HSERO_RS19285 in Herbaspirillum seropedicae SmR1

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS20770 MFS transporter 1.0 HSERO_RS19285 long-chain fatty acid--CoA ligase 0.35 13
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS06820 cytochrome c oxidase subunit 3 0.68 ABZR87_RS02020 long-chain fatty acid--CoA ligase 0.75 14
Ralstonia solanacearum PSI07 0.69 RPSI07_RS22340 cytochrome c oxidase subunit 3 0.68 RPSI07_RS10900 long-chain-fatty-acid--CoA ligase low > 81
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS10965 cytochrome c oxidase subunit 3 0.68 RALBFv3_RS06340 long-chain-fatty-acid--CoA ligase low > 76
Ralstonia solanacearum UW163 0.69 UW163_RS02615 cytochrome c oxidase subunit 3 0.68 UW163_RS07285 long-chain-fatty-acid--CoA ligase — —
Ralstonia solanacearum GMI1000 0.69 RS_RS01805 cytochrome c oxidase subunit 3 0.68 RS_RS14290 long-chain-fatty-acid--CoA ligase 0.44 9
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01895 MFS transporter 0.72 RR42_RS18150 long-chain fatty acid--CoA ligase low > 128
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS01520 cytochrome c oxidase subunit 3 0.66 QEN71_RS27455 long-chain fatty acid--CoA ligase low > 153
Castellaniella sp019104865 MT123 0.62 ABCV34_RS13255 cytochrome c oxidase subunit 3 0.53 ABCV34_RS11410 AMP-binding protein low > 48
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_01990 cytochrome c oxidase subunit 3 0.68 H281DRAFT_06226 long-chain acyl-CoA synthetase low > 103
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS02665 MFS transporter 0.68 BPHYT_RS17295 long-chain fatty acid--CoA ligase low > 109
Paraburkholderia graminis OAS925 0.61 ABIE53_000678 cytochrome c oxidase subunit 3 0.68 ABIE53_003625 long-chain acyl-CoA synthetase low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF693 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.64 GFF2607 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 90
Acidovorax sp. GW101-3H11 0.61 Ac3H11_3888 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.63 Ac3H11_663 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 79
Variovorax sp. SCN45 0.61 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.63 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 127
Variovorax sp. OAS795 0.60 ABID97_RS23940 cytochrome c oxidase subunit 3 0.64 ABID97_RS04445 long-chain-fatty-acid--CoA ligase low > 91
Lysobacter sp. OAE881 0.53 ABIE51_RS19190 cytochrome c oxidase subunit 3 0.55 ABIE51_RS11545 long-chain fatty acid--CoA ligase low > 62
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS00305 cytochrome c oxidase subunit 3 0.50 PFLU_RS17185 AMP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS00305 cytochrome c oxidase subunit 3 0.50 PFLU_RS17185 AMP-binding protein 0.46 46
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_1857 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.43 Pf1N1B4_575 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 87
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_11175 MFS transporter 0.50 AO356_05105 long-chain fatty acid--CoA ligase low > 104
Pseudomonas simiae WCS417 0.51 PS417_00315 MFS transporter 0.50 PS417_15170 long-chain fatty acid--CoA ligase low > 88
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4101 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.50 Pf6N2E2_2873 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 103
Pseudomonas sp. RS175 0.51 PFR28_04688 Cytochrome c oxidase subunit 3 0.50 PFR28_00584 Long-chain-fatty-acid--CoA ligase low > 88
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_10845 MFS transporter 0.50 AO353_03315 long-chain fatty acid--CoA ligase low > 101
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_611 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.50 PfGW456L13_1910 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 87
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.4842.1 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.55 Xcc-8004.2896.1 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 74
Shewanella loihica PV-4 0.48 Shew_0122 cytochrome c oxidase, subunit III (RefSeq) 0.55 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.47 MIT1002_04032 Cytochrome c oxidase subunit 3 0.52 MIT1002_02588 Long-chain-fatty-acid--CoA ligase low > 70
Pseudomonas stutzeri RCH2 0.47 Psest_4329 Heme/copper-type cytochrome/quinol oxidase, subunit 3 0.51 Psest_1335 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) low > 67
Pseudomonas putida KT2440 0.45 PP_0106 cytochrome c oxidase subunit 3 0.50 PP_4549 long-chain-fatty-acid/CoA ligase low > 96
Pseudomonas sp. S08-1 0.45 OH686_12310 Cytochrome c oxidase polypeptide III 0.51 OH686_05750 Long-chain-fatty-acid--CoA ligase low > 80
Marinobacter adhaerens HP15 0.45 HP15_3774 cytochrome c oxidase subunit III 0.52 HP15_1864 acyl-CoA synthase low > 73
Shewanella amazonensis SB2B 0.44 Sama_3486 cytochrome c oxidase subunit III (RefSeq) 0.55 Sama_1934 long-chain-fatty-acid--CoA ligase (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS12920 cytochrome c oxidase subunit 3 0.59 ABZR86_RS02155 AMP-binding protein low > 74
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_16530 cyoC cytochrome c oxidase subunit 3 0.60 OKGIIK_06445 menE,fadK long-chain-fatty-acid--CoA ligase low > 52
Rhodanobacter denitrificans MT42 0.43 LRK55_RS06850 cytochrome c oxidase subunit 3 0.59 LRK55_RS00570 long-chain-fatty-acid--CoA ligase low > 63
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS07110 cytochrome c oxidase subunit 3 0.59 LRK54_RS00795 long-chain-fatty-acid--CoA ligase low > 59
Shewanella oneidensis MR-1 0.42 SO4609 cytochrome c oxidase subunit III (NCBI ptt file) 0.54 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_3994 cytochrome c oxidase, subunit III (RefSeq) 0.56 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0134 Heme/copper-type cytochrome/quinol oxidase, subunit 3 0.53 B158DRAFT_1573 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 40
Rhizobium sp. OAE497 0.33 ABIE40_RS04085 cytochrome c oxidase subunit 3 0.64 ABIE40_RS02155 long-chain fatty acid--CoA ligase low > 107
Agrobacterium fabrum C58 0.32 Atu0771 cytochrome c oxidase subunit III 0.63 Atu0405 long-chain-fatty-acid-CoA-ligase 0.46 17
Magnetospirillum magneticum AMB-1 0.32 AMB_RS10950 cytochrome c oxidase subunit 3 0.20 AMB_RS18140 malonyl-CoA synthase low > 64
Rhodopseudomonas palustris CGA009 0.31 TX73_004310 cytochrome c oxidase subunit 3 0.67 TX73_022105 long-chain fatty acid--CoA ligase low > 86
Azospirillum brasilense Sp245 0.30 AZOBR_RS10570 cytochrome B562 0.33 AZOBR_RS31155 AMP-dependent synthetase low > 97
Dinoroseobacter shibae DFL-12 0.30 Dshi_1144 cytochrome c oxidase subunit III (RefSeq) 0.39 Dshi_1000 AMP-dependent synthetase and ligase (RefSeq) — —
Sinorhizobium meliloti 1021 0.30 SMc00013 cytochrome C oxidase subunit III transmembrane protein 0.62 SMc02162 long-chain-fatty-acid--CoA ligase low > 103
Bosea sp. OAE506 0.28 ABIE41_RS22970 cytochrome c oxidase subunit 3 0.53 ABIE41_RS11685 AMP-binding protein low > 77
Azospirillum sp. SherDot2 0.27 MPMX19_00889 Cytochrome c oxidase subunit 3 0.34 MPMX19_02151 Long-chain-fatty-acid--CoA ligase low > 112
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_2002 Heme/copper-type cytochrome/quinol oxidase, subunit 3 0.27 Ga0059261_1004 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 68
Phaeobacter inhibens DSM 17395 0.26 PGA1_c06290 cytochrome c oxidase subunit 3 0.31 PGA1_c25300 long-chain-fatty-acid--CoA ligase FadD — —

Not shown: 3 genomes with orthologs for HSERO_RS20770 only; 39 genomes with orthologs for HSERO_RS19285 only