Conservation of cofitness between HSERO_RS22035 and HSERO_RS10210 in Herbaspirillum seropedicae SmR1

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA 1.0 HSERO_RS10210 flagellar L-ring protein FlgH 0.36 1
Escherichia coli BL21 0.64 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein 0.37 ECD_01075 flagellar protein of basal-body outer-membrane L ring low > 61
Escherichia coli ECRC102 0.64 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.37 NIAGMN_24185 flgH flagellar basal body L-ring protein FlgH — —
Dickeya dianthicola 67-19 0.64 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA 0.35 HGI48_RS13495 flagellar basal body L-ring protein FlgH low > 71
Escherichia coli BW25113 0.64 b1344 ydaO predicted C32 tRNA thiolase (NCBI) 0.37 b1079 flgH flagellar L-ring protein precursor H (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase 0.37 OHPLBJKB_02586 Flagellar L-ring protein low > 73
Escherichia coli ECRC62 0.64 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.37 BNILDI_19335 flgH flagellar basal body L-ring protein FlgH low > 75
Dickeya dadantii 3937 0.64 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA 0.35 DDA3937_RS13450 flagellar basal body L-ring protein FlgH low > 74
Escherichia coli ECRC99 0.64 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.37 KEDOAH_24110 flgH flagellar basal body L-ring protein FlgH — —
Escherichia coli ECRC101 0.64 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.37 MCAODC_23005 flgH flagellar basal body L-ring protein FlgH low > 87
Escherichia coli ECOR27 0.64 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.37 NOLOHH_21175 flgH flagellar basal body L-ring protein FlgH low > 75
Escherichia coli ECRC100 0.64 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.37 OKFHMN_03645 flgH flagellar basal body L-ring protein FlgH — —
Dickeya dianthicola ME23 0.64 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA 0.34 DZA65_RS13980 flagellar basal body L-ring protein FlgH low > 75
Escherichia coli ECRC98 0.64 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.37 JDDGAC_07305 flgH flagellar basal body L-ring protein FlgH low > 86
Escherichia coli Nissle 1917 0.64 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA 0.37 ECOLIN_RS06245 flagellar basal body L-ring protein FlgH — —
Alteromonas macleodii MIT1002 0.64 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA 0.25 MIT1002_01047 Basal body L-ring protein low > 70
Pectobacterium carotovorum WPP14 0.64 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA 0.35 HER17_RS08195 flagellar basal body L-ring protein FlgH low > 75
Enterobacter asburiae PDN3 0.64 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.36 EX28DRAFT_1853 Flagellar basal body L-ring protein low > 76
Pantoea sp. MT58 0.64 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA 0.36 IAI47_12135 flagellar basal body L-ring protein FlgH low > 76
Escherichia fergusonii Becca 0.64 EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase 0.37 EFB2_02895 Flagellar L-ring protein low > 86
Enterobacter sp. TBS_079 0.63 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase 0.36 MPMX20_01758 Flagellar L-ring protein low > 85
Serratia liquefaciens MT49 0.63 IAI46_13420 tRNA 2-thiocytidine(32) synthetase TtcA 0.37 IAI46_15930 flagellar basal body L-ring protein FlgH low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase 0.36 GFF3360 Flagellar L-ring protein FlgH low > 78
Rahnella sp. WP5 0.63 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA 0.32 EX31_RS11285 flagellar basal body L-ring protein FlgH low > 89
Pseudomonas stutzeri RCH2 0.62 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.28 Psest_2962 Flagellar basal body L-ring protein low > 67
Pseudomonas sp. S08-1 0.62 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.26 OH686_02945 Flagellar L-ring protein FlgH low > 80
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase 0.29 Pf6N2E2_2626 Flagellar L-ring protein FlgH low > 103
Shewanella amazonensis SB2B 0.61 Sama_1801 hypothetical protein (RefSeq) 0.25 Sama_2312 flgH flagellar basal body L-ring protein (RefSeq) low > 62
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase 0.28 Pf1N1B4_3570 Flagellar L-ring protein FlgH low > 87
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA 0.29 AO356_03920 flagellar basal body L-ring protein 0.21 98
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase 0.27 PfGW456L13_4385 Flagellar L-ring protein FlgH low > 87
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA 0.26 AO353_18605 flagellar basal body L-ring protein low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_3705 conserved hypothetical protein 0.26 Psyr_3474 Flagellar L-ring protein low > 86
Shewanella sp. ANA-3 0.60 Shewana3_2117 PP-loop domain-containing protein (RefSeq) 0.22 Shewana3_1327 flgH flagellar basal body L-ring protein (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_3705 conserved hypothetical protein 0.26 Psyr_3474 Flagellar L-ring protein low > 86
Pseudomonas sp. RS175 0.60 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase 0.29 PFR28_00806 Flagellar L-ring protein low > 88
Pseudomonas simiae WCS417 0.60 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA 0.26 PS417_19880 flagellar basal body L-ring protein 0.23 59
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA 0.36 RR42_RS35695 flagellar L-ring protein FlgH low > 128
Dechlorosoma suillum PS 0.60 Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control 0.43 Dsui_1738 flagellar basal body L-ring protein low > 51
Ralstonia solanacearum PSI07 0.59 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA 0.40 RPSI07_RS01420 flagellar L-ring protein FlgH low > 81
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA 0.42 ABZR87_RS22260 flagellar basal body L-ring protein FlgH low > 80
Pseudomonas fluorescens SBW25 0.59 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.26 PFLU_RS21850 flagellar basal body L-ring protein FlgH low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.26 PFLU_RS21850 flagellar basal body L-ring protein FlgH low > 109
Shewanella oneidensis MR-1 0.59 SO2354 conserved hypothetical protein (NCBI ptt file) 0.22 SO3243 flgH flagellar L-ring protein FlgH (NCBI ptt file) 0.20 45
Pseudomonas putida KT2440 0.59 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA 0.28 PP_4384 Flagellar L-ring protein 0.21 25
Ralstonia solanacearum UW163 0.59 UW163_RS03335 tRNA 2-thiocytidine(32) synthetase TtcA 0.42 UW163_RS17475 flagellar L-ring protein FlgH — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS10245 tRNA 2-thiocytidine(32) synthetase TtcA 0.42 RALBFv3_RS21710 flagellar L-ring protein FlgH low > 76
Ralstonia solanacearum GMI1000 0.59 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA 0.42 RS_RS18825 flagellar L-ring protein FlgH low > 80
Acidovorax sp. GW101-3H11 0.59 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase 0.34 Ac3H11_1371 Flagellar L-ring protein FlgH — —
Paraburkholderia graminis OAS925 0.59 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA 0.37 ABIE53_000095 flagellar L-ring protein precursor FlgH low > 113
Marinobacter adhaerens HP15 0.58 HP15_2116 PP-loop domain protein 0.27 HP15_1473 flagellar basal body L-ring protein low > 73
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_05824 tRNA s(2)C-32 sulfurtransferase 0.37 H281DRAFT_05768 flagellar L-ring protein precursor FlgH low > 103
Shewanella loihica PV-4 0.58 Shew_1995 PP-loop domain-containing protein (RefSeq) 0.22 Shew_1351 flgH flagellar basal body L-ring protein (RefSeq) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase 0.30 GFF1409 Flagellar L-ring protein FlgH low > 90
Castellaniella sp019104865 MT123 0.56 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA 0.37 ABCV34_RS05740 flagellar basal body L-ring protein FlgH low > 48
Erwinia tracheiphila SCR3 0.56 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.36 LU632_RS10425 flgH flagellar basal body L-ring protein FlgH low > 74
Variovorax sp. SCN45 0.56 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.36 GFF5721 Flagellar L-ring protein FlgH low > 127
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA 0.28 ABZR86_RS20105 flagellar basal body L-ring protein FlgH low > 74
Lysobacter sp. OAE881 0.54 ABIE51_RS01305 tRNA 2-thiocytidine(32) synthetase TtcA 0.26 ABIE51_RS16700 flagellar basal body L-ring protein FlgH low > 62
Rhodanobacter denitrificans MT42 0.53 LRK55_RS10320 tRNA 2-thiocytidine(32) synthetase TtcA 0.23 LRK55_RS13175 flagellar basal body L-ring protein FlgH low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS10680 tRNA 2-thiocytidine(32) synthetase TtcA 0.23 LRK54_RS13435 flagellar basal body L-ring protein FlgH low > 59
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.25 OKGIIK_02680 flgH flagellar basal body L-ring protein FlgH low > 52
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase 0.27 Xcc-8004.2785.1 Flagellar L-ring protein FlgH low > 74
Phaeobacter inhibens DSM 17395 0.46 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA 0.15 PGA1_c35760 flagellar L-ring protein FlgH low > 62

Not shown: 15 genomes with orthologs for HSERO_RS22035 only; 6 genomes with orthologs for HSERO_RS10210 only