Conservation of cofitness between HSERO_RS04220 and HSERO_RS05515 in Herbaspirillum seropedicae SmR1

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS04220 epoxyqueuosine reductase 1.0 HSERO_RS05515 glucose-6-phosphate isomerase 0.31 13
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG 0.48 QEN71_RS21935 glucose-6-phosphate isomerase low > 153
Paraburkholderia graminis OAS925 0.64 ABIE53_003363 epoxyqueuosine reductase 0.48 ABIE53_002138 glucose-6-phosphate isomerase low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS15960 iron-sulfur cluster binding protein 0.49 BPHYT_RS09500 glucose-6-phosphate isomerase low > 109
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS03405 epoxyqueuosine reductase 0.52 RR42_RS09060 glucose-6-phosphate isomerase low > 128
Ralstonia solanacearum GMI1000 0.63 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG 0.51 RS_RS08695 glucose-6-phosphate isomerase — —
Ralstonia solanacearum PSI07 0.63 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG 0.51 RPSI07_RS16175 glucose-6-phosphate isomerase low > 81
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG 0.50 ABZR87_RS12745 glucose-6-phosphate isomerase — —
Ralstonia solanacearum UW163 0.62 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG 0.51 UW163_RS14610 glucose-6-phosphate isomerase — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG 0.51 RALBFv3_RS01300 glucose-6-phosphate isomerase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04128 epoxyqueuosine reductase 0.48 H281DRAFT_00906 glucose-6-phosphate isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF5474 Epoxyqueuosine (oQ) reductase QueG 0.41 GFF5497 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 90
Acidovorax sp. GW101-3H11 0.60 Ac3H11_306 Epoxyqueuosine (oQ) reductase QueG 0.44 Ac3H11_2077 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Variovorax sp. OAS795 0.59 ABID97_RS20285 tRNA epoxyqueuosine(34) reductase QueG 0.41 ABID97_RS07100 glucose-6-phosphate isomerase — —
Pseudomonas sp. S08-1 0.59 OH686_09500 epoxyqueuosine reductase 0.48 OH686_17230 Glucose-6-phosphate isomerase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_0566 4Fe-4S cluster binding protein 0.48 Psyr_0826 glucose-6-phosphate isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_0566 4Fe-4S cluster binding protein 0.48 Psyr_0826 glucose-6-phosphate isomerase low > 86
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG 0.37 ABZR86_RS00830 glucose-6-phosphate isomerase low > 74
Castellaniella sp019104865 MT123 0.58 ABCV34_RS13905 tRNA epoxyqueuosine(34) reductase QueG 0.33 ABCV34_RS11120 glucose-6-phosphate isomerase — —
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG 0.48 Pf1N1B4_2850 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 87
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.49 PFLU_RS25760 glucose-6-phosphate isomerase low > 109
Pseudomonas fluorescens SBW25 0.57 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.49 PFLU_RS25760 glucose-6-phosphate isomerase low > 109
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_13115 epoxyqueuosine reductase 0.48 AO353_14370 glucose-6-phosphate isomerase low > 101
Pseudomonas sp. RS175 0.57 PFR28_05115 Epoxyqueuosine reductase 0.48 PFR28_03724 Glucose-6-phosphate isomerase low > 88
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG 0.48 PfGW456L13_1518 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Pseudomonas simiae WCS417 0.57 PS417_02460 epoxyqueuosine reductase 0.49 PS417_23920 glucose-6-phosphate isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_08685 epoxyqueuosine reductase 0.48 AO356_16050 glucose-6-phosphate isomerase low > 104
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG 0.48 Pf6N2E2_5150 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 103
Pseudomonas stutzeri RCH2 0.55 Psest_0677 iron-sulfur cluster binding protein, putative 0.50 Psest_0993 Glucose-6-phosphate isomerase low > 67
Variovorax sp. SCN45 0.55 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG 0.42 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 127
Pseudomonas putida KT2440 0.55 PP_4900 epoxyqueuosine reductase 0.48 PP_4701 glucose-6-phosphate isomerase low > 96
Marinobacter adhaerens HP15 0.54 HP15_2505 iron-sulfur cluster binding protein 0.48 HP15_322 glucose-6-phosphate isomerase — —
Shewanella oneidensis MR-1 0.54 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) 0.53 SO3547 pgi glucose-6-phosphate isomerase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.53 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) 0.53 Shewana3_3148 pgi glucose-6-phosphate isomerase (RefSeq) — —
Lysobacter sp. OAE881 0.53 ABIE51_RS08045 tRNA epoxyqueuosine(34) reductase QueG 0.31 ABIE51_RS08040 glucose-6-phosphate isomerase low > 62
Alteromonas macleodii MIT1002 0.53 MIT1002_03794 Epoxyqueuosine reductase 0.50 MIT1002_03081 Glucose-6-phosphate isomerase — —
Shewanella loihica PV-4 0.53 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) 0.51 Shew_1088 pgi glucose-6-phosphate isomerase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG 0.34 Xcc-8004.3049.1 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 74
Dechlorosoma suillum PS 0.50 Dsui_3502 iron-sulfur cluster binding protein, putative 0.50 Dsui_1239 glucose-6-phosphate isomerase — —
Shewanella amazonensis SB2B 0.50 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) 0.51 Sama_0912 pgi glucose-6-phosphate isomerase (RefSeq) — —
Acinetobacter radioresistens SK82 0.48 MPMX26_01783 Epoxyqueuosine reductase 0.40 MPMX26_00065 Glucose-6-phosphate isomerase low > 36
Sinorhizobium meliloti 1021 0.34 SMc00406 4Fe-4S ferredoxin 0.45 SMc02163 glucose-6-phosphate isomerase — —
Rhodospirillum rubrum S1H 0.33 Rru_A0279 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) 0.51 Rru_A2947 Glucose-6-phosphate isomerase (NCBI) — —
Agrobacterium fabrum C58 0.32 Atu0292 iron-sulfur cluster binding protein 0.46 Atu0404 glucose-6-phosphate isomerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS11375 tRNA epoxyqueuosine(34) reductase QueG 0.39 A4249_RS14585 glucose-6-phosphate isomerase low > 48
Caulobacter crescentus NA1000 0.32 CCNA_03753 iron-sulfur cluster-binding protein 0.41 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_03753 iron-sulfur cluster-binding protein 0.41 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase — —
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_1058 epoxyqueuosine reductase 0.32 Ga0059261_1948 Glucose-6-phosphate isomerase low > 68
Dinoroseobacter shibae DFL-12 0.30 Dshi_3307 domain of unknown function DUF1730 (RefSeq) 0.42 Dshi_1682 Glucose-6-phosphate isomerase (RefSeq) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_0824 iron-sulfur cluster binding protein, putative 0.53 Echvi_4036 Glucose-6-phosphate isomerase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_19810 epoxyqueuosine reductase 0.52 CA264_07470 glucose-6-phosphate isomerase low > 74
Magnetospirillum magneticum AMB-1 0.30 AMB_RS03995 tRNA epoxyqueuosine(34) reductase QueG 0.55 AMB_RS22330 glucose-6-phosphate isomerase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS07975 tRNA epoxyqueuosine(34) reductase QueG 0.54 ABZR88_RS03585 glucose-6-phosphate isomerase — —
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_0530 4Fe-4S cluster binding 0.16 Synpcc7942_2029 pgi glucose-6-phosphate isomerase — —

Not shown: 35 genomes with orthologs for HSERO_RS04220 only; 2 genomes with orthologs for HSERO_RS05515 only