| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS11620 | | NUDIX hydrolase | 1.0 | HER17_RS21440 | | nitrogen regulation protein NR(I) | 0.78 | 12 |
| Escherichia coli BL21 | 0.78 | ECD_01132 | | bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase | 0.92 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | — | — |
| Escherichia fergusonii Becca | 0.78 | EFB2_02841 | | Phosphatase NudJ | 0.92 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | low | > 86 |
| Escherichia coli ECRC102 | 0.78 | NIAGMN_24895 | nudJ | phosphatase NudJ | 0.92 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC62 | 0.78 | BNILDI_19060 | nudJ | phosphatase NudJ | 0.92 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | low | > 75 |
| Escherichia coli BW25113 | 0.78 | b1134 | ymfB | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | 0.92 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.78 | MCAODC_22335 | nudJ | phosphatase NudJ | 0.92 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_02534 | | Phosphatase NudJ | 0.92 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | low | > 73 |
| Escherichia coli ECRC100 | 0.78 | OKFHMN_00750 | nudJ | phosphatase NudJ | 0.92 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | low | > 80 |
| Escherichia coli Nissle 1917 | 0.78 | ECOLIN_RS06630 | | phosphatase NudJ | 0.92 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC99 | 0.78 | KEDOAH_24835 | nudJ | phosphatase NudJ | 0.92 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC98 | 0.78 | JDDGAC_06615 | nudJ | phosphatase NudJ | 0.92 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECOR27 | 0.78 | NOLOHH_20895 | nudJ | phosphatase NudJ | 0.92 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | low | > 75 |
| Escherichia coli ECOR38 | 0.78 | HEPCGN_24225 | nudJ | phosphatase NudJ | 0.92 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | low | > 87 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS11480 | | NUDIX hydrolase | 0.97 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | low | > 74 |
| Serratia liquefaciens MT49 | 0.77 | IAI46_10445 | | NUDIX hydrolase | 0.94 | IAI46_24960 | | nitrogen regulation protein NR(I) | low | > 86 |
| Dickeya dianthicola ME23 | 0.76 | DZA65_RS11860 | | NUDIX hydrolase | 0.97 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | low | > 75 |
| Dickeya dianthicola 67-19 | 0.76 | HGI48_RS11525 | | NUDIX hydrolase | 0.97 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | low | > 71 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3419 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.92 | GFF2220 | | Nitrogen regulation protein NR(I) | low | > 78 |
| Klebsiella michiganensis M5al | 0.75 | BWI76_RS11320 | | NUDIX hydrolase | 0.91 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | — | — |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS14570 | | NUDIX hydrolase | 0.91 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | low | > 74 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_01818 | | Phosphatase NudJ | 0.92 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | 0.17 | 64 |
| Rahnella sp. WP5 | 0.71 | EX31_RS24580 | | NUDIX hydrolase | 0.93 | EX31_RS15880 | | nitrogen regulation protein NR(I) | low | > 89 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_1796 | | ADP-ribose pyrophosphatase | 0.92 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | low | > 76 |
| Pantoea sp. MT58 | 0.65 | IAI47_11910 | | NUDIX hydrolase | 0.93 | IAI47_00450 | | nitrogen regulation protein NR(I) | low | > 76 |
| Shewanella amazonensis SB2B | 0.41 | Sama_2061 | | MutT/nudix family protein (RefSeq) | 0.69 | Sama_3427 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.41 | Shew_1561 | | NUDIX hydrolase (RefSeq) | 0.69 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.40 | Shewana3_1748 | | NUDIX hydrolase (RefSeq) | 0.70 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.39 | SO2631 | | MutT/nudix family protein (NCBI ptt file) | 0.70 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_06880 | | Phosphatase NudJ | 0.45 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.2757.1 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.48 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.35 | LRK54_RS00430 | | NUDIX hydrolase | 0.47 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.35 | LRK55_RS00170 | | NUDIX hydrolase | 0.47 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS02190 | | NUDIX hydrolase | 0.45 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | low | > 74 |
| Dechlorosoma suillum PS | 0.33 | Dsui_3338 | | Zn-finger containing NTP pyrophosphohydrolase | 0.57 | Dsui_1051 | | nitrogen regulation protein NR(I) | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.32 | MPMX26_01049 | | Phosphatase NudJ | 0.64 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | low | > 36 |
| Marinobacter adhaerens HP15 | 0.32 | HP15_2085 | | MutT/nudix family protein | 0.65 | HP15_425 | | two-component response regulator NtrC | low | > 73 |
| Pseudomonas sp. S08-1 | 0.32 | OH686_00215 | | Nudix-like NDP and NTP phosphohydrolase NudJ | 0.67 | OH686_10640 | | nitrogen regulation protein NR(I) | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS01335 | | NUDIX hydrolase | 0.57 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_2640 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.67 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.29 | H281DRAFT_04652 | | ADP-ribose pyrophosphatase YjhB, NUDIX family | 0.55 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | low | > 103 |
| Pseudomonas sp. RS175 | 0.29 | PFR28_02618 | | Phosphatase NudJ | 0.67 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_287 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.67 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | low | > 103 |
| Ralstonia solanacearum IBSBF1503 | 0.29 | RALBFv3_RS05740 | | NUDIX hydrolase | 0.57 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum UW163 | 0.29 | UW163_RS07885 | | NUDIX hydrolase | 0.57 | UW163_RS13000 | | nitrogen regulation protein NR(I) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_4049 | | Nudix-like NDP and NTP phosphohydrolase YmfB | 0.67 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS18575 | | NUDIX hydrolase | 0.67 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS18575 | | NUDIX hydrolase | 0.67 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_27700 | | NUDIX hydrolase | 0.67 | AO353_12145 | | nitrogen regulation protein NR(I) | 0.32 | 26 |
| Burkholderia phytofirmans PsJN | 0.28 | BPHYT_RS03365 | | NUDIX hydrolase | 0.55 | BPHYT_RS12935 | | chemotaxis protein CheY | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.28 | RPSI07_RS11560 | | NUDIX hydrolase | 0.57 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | low | > 81 |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_2022 | | ADP-ribose pyrophosphatase | 0.66 | Psest_3932 | | nitrogen regulation protein NR(I) | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS13630 | | NUDIX hydrolase | 0.57 | RS_RS06320 | | nitrogen regulation protein NR(I) | — | — |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_4361 | | NTP pyrophosphohydrolases including oxidative damage repair enzymes | 0.55 | Ac3H11_4432 | | Nitrogen regulation protein NR(I) | low | > 79 |
| Variovorax sp. SCN45 | 0.27 | GFF4911 | | Nudix-like NDP and NTP phosphohydrolase NudJ | 0.55 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_22115 | | NUDIX hydrolase | 0.67 | AO356_09730 | | nitrogen regulation protein NR(I) | low | > 104 |
| Paraburkholderia graminis OAS925 | 0.27 | ABIE53_000811 | | 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) | 0.55 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS26735 | | NUDIX hydrolase | 0.56 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | low | > 153 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_16535 | | NUDIX hydrolase | 0.67 | PS417_01635 | | nitrogen regulation protein NR(I) | low | > 88 |
| Lysobacter sp. OAE881 | 0.26 | ABIE51_RS11505 | | NUDIX hydrolase | 0.49 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.26 | GFF2602 | | NTP pyrophosphohydrolases including oxidative damage repair enzymes | 0.55 | GFF5269 | | Nitrogen regulation protein NR(I) | low | > 90 |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_3189 | | NUDIX hydrolase | 0.67 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.36 | 39 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_3189 | | NUDIX hydrolase | 0.67 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | — | — |
| Variovorax sp. OAS795 | 0.26 | ABID97_RS04420 | | NUDIX hydrolase | 0.55 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | low | > 91 |
| Pseudomonas putida KT2440 | 0.25 | PP_4013 | | MutT/nudix family protein | 0.67 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | low | > 96 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS03475 | | NUDIX hydrolase | 0.57 | HSERO_RS15680 | | chemotaxis protein CheY | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS17470 | | NUDIX hydrolase | 0.57 | RR42_RS12980 | | chemotaxis protein CheY | low | > 128 |
Not shown: 1 genomes with orthologs for HER17_RS11620 only; 29 genomes with orthologs for HER17_RS21440 only