Conservation of cofitness between HER17_RS08120 and HER17_RS05840 in Pectobacterium carotovorum WPP14

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS08120 chemotaxis response regulator protein-glutamate methylesterase 1.0 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.89 17
Dickeya dadantii 3937 0.95 DDA3937_RS13525 chemotaxis response regulator protein-glutamate methylesterase 0.83 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin low > 74
Dickeya dianthicola 67-19 0.95 HGI48_RS13570 chemotaxis response regulator protein-glutamate methylesterase 0.83 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin low > 71
Dickeya dianthicola ME23 0.95 DZA65_RS14055 chemotaxis response regulator protein-glutamate methylesterase 0.83 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin low > 75
Serratia liquefaciens MT49 0.90 IAI46_16015 chemotaxis response regulator protein-glutamate methylesterase 0.83 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin low > 86
Rahnella sp. WP5 0.89 EX31_RS11360 chemotaxis response regulator protein-glutamate methylesterase 0.80 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin low > 89
Enterobacter asburiae PDN3 0.86 EX28DRAFT_0673 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 0.83 EX28DRAFT_0084 4Fe-4S dicluster domain low > 76
Escherichia coli ECOR38 0.86 HEPCGN_04570 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 87
Escherichia coli ECRC99 0.86 KEDOAH_01955 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL
Escherichia coli ECRC101 0.86 MCAODC_19255 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 87
Escherichia coli ECRC98 0.86 JDDGAC_00725 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 86
Escherichia coli BL21 0.86 ECD_01854 fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA 0.83 ECD_02456 putative 4Fe-4S cluster-containing protein low > 61
Escherichia coli ECRC100 0.86 OKFHMN_26150 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_01845 Chemotaxis response regulator protein-glutamate methylesterase 0.83 OHPLBJKB_01145 Ferredoxin YfhL low > 73
Escherichia coli ECRC102 0.86 NIAGMN_01910 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL
Escherichia coli Nissle 1917 0.86 ECOLIN_RS10755 protein-glutamate methylesterase/protein glutamine deamidase 0.83 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL
Escherichia coli ECRC62 0.86 BNILDI_15380 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 75
Escherichia coli ECOR27 0.86 NOLOHH_16590 cheB protein-glutamate methylesterase/protein glutamine deamidase 0.83 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 75
Escherichia fergusonii Becca 0.86 EFB2_02060 Protein-glutamate methylesterase/protein-glutamine glutaminase 0.83 EFB2_01334 Ferredoxin YfhL low > 86
Pantoea sp. MT58 0.86 IAI47_08330 chemotaxis response regulator protein-glutamate methylesterase 0.74 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin low > 76
Enterobacter sp. TBS_079 0.86 MPMX20_02787 Protein-glutamate methylesterase/protein-glutamine glutaminase 0.83 MPMX20_03433 Ferredoxin YfhL low > 85
Escherichia coli BW25113 0.85 b1883 cheB chemotaxis-specific methylesterase (NCBI) 0.83 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF1664 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 0.82 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS13525 chemotaxis response regulator protein-glutamate methylesterase 0.78 LU632_RS15360 YfhL family 4Fe-4S dicluster ferredoxin
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS18970 chemotaxis protein 0.55 BPHYT_RS02825 ferredoxin low > 109
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS28985 chemotaxis response regulator protein-glutamate methylesterase 0.56 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin low > 153
Variovorax sp. SCN45 0.71 GFF5767 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 0.50 GFF2345 Uncharacterized ferredoxin-like protein YfhL low > 127
Paraburkholderia graminis OAS925 0.71 ABIE53_000119 two-component system chemotaxis response regulator CheB 0.56 ABIE53_000703 ferredoxin low > 113
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS35785 chemotaxis protein 0.61 RR42_RS02000 ferredoxin
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_05747 two-component system, chemotaxis family, response regulator CheB 0.56 H281DRAFT_01943 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) low > 103
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS10125 chemotaxis protein 0.54 HSERO_RS20685 ferredoxin
Ralstonia solanacearum PSI07 0.63 RPSI07_RS06230 chemotaxis response regulator protein-glutamate methylesterase 0.60 RPSI07_RS22220 4Fe-4S dicluster domain-containing protein
Ralstonia solanacearum GMI1000 0.63 RS_RS23895 chemotaxis response regulator protein-glutamate methylesterase 0.59 RS_RS01930 4Fe-4S dicluster domain-containing protein
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS17990 chemotaxis response regulator protein-glutamate methylesterase 0.60 ABZR87_RS06970 YfhL family 4Fe-4S dicluster ferredoxin low > 80
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS17415 chemotaxis response regulator protein-glutamate methylesterase 0.60 RALBFv3_RS11080 4Fe-4S dicluster domain-containing protein
Ralstonia solanacearum UW163 0.62 UW163_RS21735 chemotaxis response regulator protein-glutamate methylesterase 0.60 UW163_RS02500 4Fe-4S dicluster domain-containing protein
Acidovorax sp. GW101-3H11 0.59 Ac3H11_1425 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 0.58 Ac3H11_4828 Ferredoxin low > 79
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.2888.1 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 0.46 Xcc-8004.2157.1 4Fe-4S ferredoxin, iron-sulfur binding
Dechlorosoma suillum PS 0.53 Dsui_1713 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 0.60 Dsui_1029 hypothetical protein
Lysobacter sp. OAE881 0.52 ABIE51_RS16960 chemotaxis response regulator protein-glutamate methylesterase 0.48 ABIE51_RS15110 YfhL family 4Fe-4S dicluster ferredoxin
Rhodopseudomonas palustris CGA009 0.51 TX73_000705 chemotaxis response regulator protein-glutamate methylesterase 0.46 TX73_003430 YfhL family 4Fe-4S dicluster ferredoxin low > 86
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS22205 chemotaxis response regulator protein-glutamate methylesterase 0.50 ABZR86_RS20005 YfhL family 4Fe-4S dicluster ferredoxin low > 74
Rhodanobacter denitrificans MT42 0.49 LRK55_RS13410 chemotaxis response regulator protein-glutamate methylesterase 0.52 LRK55_RS13095 YfhL family 4Fe-4S dicluster ferredoxin low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS13670 chemotaxis response regulator protein-glutamate methylesterase 0.54 LRK54_RS13355 YfhL family 4Fe-4S dicluster ferredoxin low > 59
Shewanella sp. ANA-3 0.48 Shewana3_2213 response regulator receiver modulated CheB methylesterase (RefSeq) 0.60 Shewana3_1067 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq)
Shewanella oneidensis MR-1 0.48 SO2327 cheB-2 protein-glutamate methylesterase CheB (NCBI ptt file) 0.60 SO1251 ferredoxin, 4Fe-4S (NCBI ptt file)
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_22645 chemotaxis protein CheY 0.55 AO356_13280 ferredoxin
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_1775 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 0.55 Pf6N2E2_4571 4Fe-4S ferredoxin, iron-sulfur binding
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS24965 chemotaxis response regulator protein-glutamate methylesterase 0.56 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin
Pseudomonas fluorescens SBW25 0.48 PFLU_RS24965 chemotaxis response regulator protein-glutamate methylesterase 0.56 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin low > 109
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0781 Protein-glutamate methylesterase 0.59 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein
Pseudomonas sp. RS175 0.47 PFR28_01434 Protein-glutamate methylesterase/protein-glutamine glutaminase 0.55 PFR28_04270 Ferredoxin
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_02915 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains 0.52 OKGIIK_02595 nuoI Ferredoxin low > 52
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0781 Protein-glutamate methylesterase 0.59 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein
Pseudomonas stutzeri RCH2 0.47 Psest_0653 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 0.56 Psest_0243 hypothetical protein
Shewanella loihica PV-4 0.47 Shew_0109 response regulator receiver modulated CheB methylesterase (RefSeq) 0.61 Shew_2785 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.46 Sama_3499 protein-glutamate methylesterase (RefSeq) 0.59 Sama_1002 ferredoxin, 4Fe-4S (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_19520 chemotaxis response regulator protein-glutamate methylesterase 0.67 CSW01_03745 ferredoxin low > 62
Pseudomonas sp. S08-1 0.44 OH686_21840 Chemotaxis response regulator protein-glutamate methylesterase CheB 0.56 OH686_14145 Uncharacterized ferredoxin-like protein YfhL low > 80
Alteromonas macleodii MIT1002 0.32 MIT1002_01107 Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon 0.59 MIT1002_02343 putative ferredoxin-like protein low > 70
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_18805 chemotaxis protein CheY 0.56 AO353_08310 ferredoxin
Pseudomonas putida KT2440 0.31 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon 0.55 PP_5124 putative 4Fe-4S cluster-containing protein
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_4327 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 0.56 PfGW456L13_980 4Fe-4S ferredoxin, iron-sulfur binding
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_3630 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 0.56 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding
Pseudomonas simiae WCS417 0.30 PS417_19675 chemotaxis protein CheY 0.56 PS417_26865 ferredoxin
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_07600 chemotaxis response regulator protein-glutamate methylesterase 0.36 CA264_00950 ferredoxin

Not shown: 19 genomes with orthologs for HER17_RS08120 only; 4 genomes with orthologs for HER17_RS05840 only