Conservation of cofitness between HER17_RS04700 and HER17_RS05385 in Pectobacterium carotovorum WPP14

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04700 glutamate 5-kinase 1.0 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.91 15
Rahnella sp. WP5 0.90 EX31_RS20980 glutamate 5-kinase 0.80 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.97 15
Serratia liquefaciens MT49 0.90 IAI46_04430 glutamate 5-kinase 0.85 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.76 15
Enterobacter sp. TBS_079 0.89 MPMX20_00927 Glutamate 5-kinase 0.78 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.88 38
Klebsiella michiganensis M5al 0.89 BWI76_RS05840 glutamate 5-kinase 0.76 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.84 37
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2651 glutamate 5-kinase 0.78 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) 0.89 12
Pantoea sp. MT58 0.89 IAI47_15120 glutamate 5-kinase 0.75 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.88 37
Dickeya dianthicola 67-19 0.89 HGI48_RS16605 glutamate 5-kinase 0.88 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.74 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03398 Glutamate 5-kinase 0.77 OHPLBJKB_01109 P-protein low > 73
Escherichia coli ECOR38 0.88 HEPCGN_07780 proB Glutamate 5-kinase 0.77 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 1
Erwinia tracheiphila SCR3 0.88 LU632_RS01185 proB glutamate 5-kinase 0.73 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase 0.75 41
Dickeya dianthicola ME23 0.88 DZA65_RS17695 glutamate 5-kinase 0.88 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase 0.84 5
Escherichia fergusonii Becca 0.88 EFB2_03778 Glutamate 5-kinase 0.77 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli ECOR27 0.88 NOLOHH_02050 proB Glutamate 5-kinase 0.77 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.98 8
Escherichia coli ECRC99 0.88 KEDOAH_18480 proB Glutamate 5-kinase 0.77 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC101 0.88 MCAODC_00195 proB Glutamate 5-kinase 0.77 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.92 7
Escherichia coli Nissle 1917 0.88 ECOLIN_RS01825 glutamate 5-kinase 0.77 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase 0.82 31
Escherichia coli ECRC102 0.88 NIAGMN_07535 proB Glutamate 5-kinase 0.77 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli BL21 0.88 ECD_00239 gamma-glutamate kinase 0.77 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.81 39
Escherichia coli ECRC98 0.88 JDDGAC_13300 proB Glutamate 5-kinase 0.77 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.86 28
Escherichia coli BW25113 0.88 b0242 proB gamma-glutamyl kinase (NCBI) 0.77 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.91 31
Escherichia coli ECRC62 0.88 BNILDI_00245 proB Glutamate 5-kinase 0.77 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 25
Escherichia coli ECRC100 0.88 OKFHMN_09675 proB Glutamate 5-kinase 0.77 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.95 35
Dickeya dadantii 3937 0.88 DDA3937_RS16535 glutamate 5-kinase 0.88 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase 0.68 50
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_11575 glutamate 5-kinase 0.56 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Dechlorosoma suillum PS 0.40 Dsui_0166 glutamate 5-kinase 0.18 Dsui_1940 chorismate mutase, clade 2 — —
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS25360 glutamate 5-kinase 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens SBW25 0.39 PFLU_RS25360 glutamate 5-kinase 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas simiae WCS417 0.39 PS417_23545 gamma-glutamyl kinase 0.21 PS417_08125 prephenate dehydratase 0.39 67
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.20 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_14115 gamma-glutamyl kinase 0.20 AO353_02070 prephenate dehydratase 0.76 16
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0704 glutamate 5-kinase 0.20 Psyr_3645 prephenate dehydratase — —
Paraburkholderia graminis OAS925 0.37 ABIE53_003588 glutamate 5-kinase 0.20 ABIE53_003157 chorismate mutase/prephenate dehydratase 0.74 13
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0704 glutamate 5-kinase 0.20 Psyr_3645 prephenate dehydratase — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS17110 glutamate 5-kinase 0.21 BPHYT_RS14910 chorismate mutase — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.20 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.78 50
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_06264 glutamate 5-kinase 0.21 H281DRAFT_03925 chorismate mutase 0.69 4
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS27270 glutamate 5-kinase 0.21 QEN71_RS04070 prephenate dehydratase 0.98 2
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.21 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Ralstonia solanacearum UW163 0.36 UW163_RS07480 glutamate 5-kinase 0.20 UW163_RS16050 chorismate mutase — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS06145 glutamate 5-kinase 0.20 RALBFv3_RS13760 chorismate mutase 0.63 20
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15815 gamma-glutamyl kinase 0.21 AO356_03465 prephenate dehydratase — —
Pseudomonas putida KT2440 0.36 PP_0691 Glutamate 5-kinase 0.20 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas sp. RS175 0.36 PFR28_03769 Glutamate 5-kinase 0.21 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Variovorax sp. OAS795 0.36 ABID97_RS23400 glutamate 5-kinase 0.18 ABID97_RS09515 prephenate dehydratase — —
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS01815 gamma-glutamyl kinase 0.20 HSERO_RS18430 chorismate mutase 0.85 11
Pseudomonas sp. S08-1 0.36 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.20 OH686_20870 Chorismate mutase I / Prephenate dehydratase 0.67 41
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17940 gamma-glutamyl kinase 0.22 RR42_RS04460 chorismate mutase low > 128
Ralstonia solanacearum PSI07 0.35 RPSI07_RS11095 glutamate 5-kinase 0.20 RPSI07_RS19710 prephenate dehydratase 0.74 4
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS01810 glutamate 5-kinase 0.19 ABZR87_RS09450 prephenate dehydratase 0.84 11
Ralstonia solanacearum GMI1000 0.35 RS_RS14095 glutamate 5-kinase 0.19 RS_RS04495 prephenate dehydratase low > 80
Castellaniella sp019104865 MT123 0.35 ABCV34_RS10800 glutamate 5-kinase 0.19 ABCV34_RS07110 prephenate dehydratase low > 48
Pseudomonas stutzeri RCH2 0.35 Psest_3384 glutamate 5-kinase 0.20 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.19 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.87 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.18 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 90
Acinetobacter radioresistens SK82 0.34 MPMX26_02135 Glutamate 5-kinase 0.20 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase 0.78 11
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.21 DvMF_1749 prephenate dehydratase (RefSeq) 0.94 16
Alteromonas macleodii MIT1002 0.33 MIT1002_04056 Glutamate 5-kinase 0.54 MIT1002_01316 P-protein low > 70
Marinobacter adhaerens HP15 0.33 HP15_508 gamma-glutamyl kinase 0.20 HP15_1362 chorismate mutase / prephenate dehydratase — —
Variovorax sp. SCN45 0.33 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.18 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.83 1
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU0930 proB glutamate 5-kinase (TIGR) 0.22 DVU0462 chorismate mutase/prephenate dehydratase (TIGR) 0.89 3
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS02375 glutamate 5-kinase 0.20 LRK54_RS00395 prephenate dehydratase low > 59
Rhodanobacter denitrificans MT42 0.30 LRK55_RS02130 glutamate 5-kinase 0.20 LRK55_RS00135 prephenate dehydratase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.18 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.70 8
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_09420 proB glutamate 5-kinase 0.19 OKGIIK_06915 pheA prephenate dehydratase low > 52
Lysobacter sp. OAE881 0.28 ABIE51_RS13370 glutamate 5-kinase 0.20 ABIE51_RS12145 prephenate dehydratase 0.81 42
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS08685 glutamate 5-kinase 0.19 ABZR86_RS02225 prephenate dehydratase 0.85 38

Not shown: 32 genomes with orthologs for HER17_RS04700 only; 1 genomes with orthologs for HER17_RS05385 only