Conservation of cofitness between PS417_04435 and PS417_04430 in Pseudomonas simiae WCS417

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04435 uracil phosphoribosyltransferase 1.0 PS417_04430 uracil transporter 0.57 1
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS04485 uracil phosphoribosyltransferase 0.99 PFLU_RS04480 uracil-xanthine permease 0.46 51
Pseudomonas fluorescens SBW25 0.98 PFLU_RS04485 uracil phosphoribosyltransferase 0.99 PFLU_RS04480 uracil-xanthine permease 0.92 3
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14855 uracil phosphoribosyltransferase 0.96 AO353_14850 uracil transporter 0.45 1
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.97 PfGW456L13_1596 Uracil permease 0.33 20
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.95 Pf6N2E2_5234 Uracil permease 0.34 13
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_0969 uracil phosphoribosyltransferase 0.93 Psyr_0968 Xanthine/uracil permease family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_0969 uracil phosphoribosyltransferase 0.93 Psyr_0968 Xanthine/uracil permease family low > 86
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_16565 uracil phosphoribosyltransferase 0.95 AO356_16560 uracil transporter 0.51 1
Pseudomonas sp. RS175 0.93 PFR28_03641 Uracil phosphoribosyltransferase 0.91 PFR28_03642 Uracil permease 0.41 1
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.95 Pf1N1B4_2933 Uracil permease 0.36 37
Pseudomonas putida KT2440 0.93 PP_0746 Uracil phosphoribosyltransferase 0.91 PP_0745 putative uracil permease low > 96
Pseudomonas sp. S08-1 0.92 OH686_17985 uracil phosphoribosyltransferase 0.78 OH686_17980 Uracil permease or Uracil:proton symporter UraA low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_1120 uracil phosphoribosyltransferase 0.76 Psest_1119 uracil-xanthine permease 0.27 29
Castellaniella sp019104865 MT123 0.82 ABCV34_RS15380 uracil phosphoribosyltransferase 0.26 ABCV34_RS15535 solute carrier family 23 protein low > 48
Marinobacter adhaerens HP15 0.79 HP15_2306 uracil phosphoribosyltransferase 0.67 HP15_2307 xanthine/uracil permease 0.70 1
Acinetobacter radioresistens SK82 0.78 MPMX26_02542 Uracil phosphoribosyltransferase 0.25 MPMX26_03014 Putative pyrimidine permease RutG low > 36
Enterobacter sp. TBS_079 0.74 MPMX20_03352 Uracil phosphoribosyltransferase 0.35 MPMX20_03351 Uracil permease low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) 0.34 EX28DRAFT_0171 uracil-xanthine permease 0.55 49
Klebsiella michiganensis M5al 0.74 BWI76_RS20945 uracil phosphoribosyltransferase 0.35 BWI76_RS20940 uracil/xanthine transporter low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.34 GFF2172 Uracil permease low > 78
Escherichia coli BW25113 0.73 b2498 upp uracil phosphoribosyltransferase (VIMSS) 0.34 b2497 uraA uracil transporter (NCBI) low > 76
Escherichia coli ECRC98 0.73 JDDGAC_25760 upp uracil phosphoribosyltransferase 0.34 JDDGAC_25765 uraA uracil permease — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS14185 uracil phosphoribosyltransferase 0.34 ECOLIN_RS14180 uracil permease low > 52
Escherichia coli ECRC62 0.73 BNILDI_12275 upp uracil phosphoribosyltransferase 0.34 BNILDI_12280 uraA uracil permease — —
Escherichia coli ECRC101 0.73 OKFHMN_21815 upp uracil phosphoribosyltransferase 0.34 OKFHMN_21820 uraA uracil permease — —
Escherichia fergusonii Becca 0.73 EFB2_01400 Uracil phosphoribosyltransferase 0.34 EFB2_01401 Uracil permease low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01228 Uracil phosphoribosyltransferase 0.34 OHPLBJKB_01229 Uracil permease low > 73
Escherichia coli BL21 0.73 ECD_02390 uracil phosphoribosyltransferase 0.34 ECD_02389 uracil permease low > 60
Escherichia coli ECRC101 0.73 MCAODC_12345 upp uracil phosphoribosyltransferase 0.34 MCAODC_12350 uraA uracil permease — —
Escherichia coli ECRC99 0.73 KEDOAH_06405 upp uracil phosphoribosyltransferase 0.34 KEDOAH_06400 uraA uracil permease — —
Escherichia coli ECOR38 0.73 HEPCGN_20980 upp uracil phosphoribosyltransferase 0.34 HEPCGN_20985 uraA uracil permease low > 85
Escherichia coli ECOR27 0.73 NOLOHH_13465 upp uracil phosphoribosyltransferase 0.34 NOLOHH_13470 uraA uracil permease low > 57
Escherichia coli ECRC102 0.73 NIAGMN_19585 upp uracil phosphoribosyltransferase 0.34 NIAGMN_19590 uraA uracil permease — —
Dickeya dianthicola 67-19 0.73 HGI48_RS06075 uracil phosphoribosyltransferase 0.33 HGI48_RS06080 uracil permease low > 71
Serratia liquefaciens MT49 0.73 IAI46_18880 uracil phosphoribosyltransferase 0.36 IAI46_18875 uracil permease 0.46 49
Shewanella amazonensis SB2B 0.73 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) 0.59 Sama_1918 uracil-xanthine permease (RefSeq) low > 62
Dickeya dadantii 3937 0.72 DDA3937_RS06030 uracil phosphoribosyltransferase 0.34 DDA3937_RS06035 uracil permease low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS06425 uracil phosphoribosyltransferase 0.33 DZA65_RS06430 uracil permease low > 75
Pantoea sp. MT58 0.72 IAI47_05185 uracil phosphoribosyltransferase 0.34 IAI47_05190 uracil permease low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS15460 uracil phosphoribosyltransferase 0.35 HER17_RS15455 uracil permease low > 75
Rahnella sp. WP5 0.71 EX31_RS22700 uracil phosphoribosyltransferase 0.35 EX31_RS22705 uracil permease low > 89
Erwinia tracheiphila SCR3 0.71 LU632_RS08280 upp uracil phosphoribosyltransferase 0.34 LU632_RS08290 uraA uracil permease low > 74
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_11345 uracil phosphoribosyltransferase 0.60 CSW01_10810 uracil permease low > 62
Shewanella oneidensis MR-1 0.70 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) 0.60 SO2879 uraA uracil permease (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.70 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) 0.60 Shewana3_1641 uracil-xanthine permease (RefSeq) low > 73
Shewanella loihica PV-4 0.70 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.60 Shew_1836 uracil-xanthine permease (RefSeq) 0.71 3
Dechlorosoma suillum PS 0.69 Dsui_2333 uracil phosphoribosyltransferase 0.55 Dsui_2332 uracil-xanthine permease low > 51
Desulfovibrio vulgaris Miyazaki F 0.65 DvMF_0911 uracil phosphoribosyltransferase (RefSeq) 0.32 DvMF_0910 uracil-xanthine permease (RefSeq) 0.30 28
Desulfovibrio vulgaris Hildenborough JW710 0.63 DVU1025 upp uracil phosphoribosyltransferase (TIGR) 0.53 DVU1026 uraA uracil permease (TIGR) — —
Bosea sp. OAE506 0.53 ABIE41_RS22700 uracil phosphoribosyltransferase 0.25 ABIE41_RS13010 uracil-xanthine permease family protein low > 77
Fusobacterium nucleatum SB010 0.52 HUW76_07615 uracil phosphoribosyltransferase 0.39 HUW76_06000 uracil-xanthine permease low > 35
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.27 GFF2000 Uracil permease low > 90
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS30815 uracil phosphoribosyltransferase 0.25 RR42_RS04530 pyrimidine permease low > 128
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.27 Ac3H11_4891 Uracil permease low > 79
Variovorax sp. OAS795 0.50 ABID97_RS16850 uracil phosphoribosyltransferase 0.27 ABID97_RS03010 solute carrier family 23 protein low > 91
Variovorax sp. SCN45 0.50 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.27 GFF3368 Pyrimidine permease low > 127
Agrobacterium fabrum C58 0.50 Atu0135 uracil phosphoribosyltransferase 0.28 Atu3076 uracil transport protein low > 89
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS24390 uracil phosphoribosyltransferase 0.27 QEN71_RS00925 solute carrier family 23 protein low > 153
Azospirillum brasilense Sp245 0.47 AZOBR_RS03150 uracil phosphoribosyltransferase 0.30 AZOBR_RS31675 uracil transporter low > 97
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS06415 uracil phosphoribosyltransferase 0.28 BPHYT_RS01995 pyrimidine permease low > 109
Azospirillum sp. SherDot2 0.47 MPMX19_02205 Uracil phosphoribosyltransferase 0.26 MPMX19_02961 Putative pyrimidine permease RutG low > 112
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04523 uracil phosphoribosyltransferase 0.28 H281DRAFT_02126 uracil-xanthine permease low > 103
Paraburkholderia graminis OAS925 0.46 ABIE53_001547 uracil phosphoribosyltransferase 0.28 ABIE53_000545 putative pyrimidine permease RutG low > 113
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS03500 uracil phosphoribosyltransferase 0.25 HSERO_RS18085 pyrimidine permease low > 78
Bifidobacterium breve UCC2003 0.38 BBR_RS19680 uracil phosphoribosyltransferase 0.19 BBR_RS14875 uracil-xanthine permease low > 34
Bacteroides ovatus ATCC 8483 0.23 BACOVA_02012 putative uracil phosphoribosyltransferase 0.44 BACOVA_02389 putative permease 0.37 31
Bacteroides thetaiotaomicron VPI-5482 0.23 BT2791 uracil phosphoribosyltransferase (NCBI ptt file) 0.45 BT0686 putative uracil permease (uracil transporter) (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS00655 uracil phosphoribosyltransferase 0.46 HMPREF1078_RS08125 uracil-xanthine permease family protein low > 61

Not shown: 30 genomes with orthologs for PS417_04435 only; 0 genomes with orthologs for PS417_04430 only