| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_20575 | | ATP-dependent helicase HrpA | 1.0 | PS417_03830 | | protein disaggregation chaperone | 0.28 | 17 |
| Pseudomonas fluorescens SBW25 | 0.98 | PFLU_RS22265 | | ATP-dependent RNA helicase HrpA | 0.99 | PFLU_RS03880 | | ATP-dependent chaperone ClpB | 0.67 | 8 |
| Pseudomonas fluorescens SBW25-INTG | 0.98 | PFLU_RS22265 | | ATP-dependent RNA helicase HrpA | 0.99 | PFLU_RS03880 | | ATP-dependent chaperone ClpB | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_18225 | | ATP-dependent RNA helicase HrpA | 0.95 | AO353_14230 | | ATP-dependent chaperone ClpB | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_4467 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | 0.96 | PfGW456L13_1495 | | ClpB protein | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_3388 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | 0.96 | Pf1N1B4_2824 | | ClpB protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_2694 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | 0.97 | Pf6N2E2_5129 | | ClpB protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_04280 | | ATP-dependent RNA helicase HrpA | 0.97 | AO356_15935 | | ATP-dependent chaperone ClpB | low | > 104 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_00739 | | hypothetical protein | 0.97 | PFR28_03746 | | Chaperone protein ClpB | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.90 | Psyr_3831 | | ATP-dependent helicase HrpA | 0.95 | Psyr_0728 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.90 | Psyr_3831 | | ATP-dependent helicase HrpA | 0.95 | Psyr_0728 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | low | > 86 |
| Pseudomonas putida KT2440 | 0.83 | PP_4546 | | ATP-dependent helicase HrpA | 0.93 | PP_0625 | | Chaperone protein ClpB | low | > 96 |
| Pseudomonas sp. S08-1 | 0.80 | OH686_05730 | | RNA helicase HrpA | 0.89 | OH686_16420 | | ATP-dependent chaperone protein ClpB | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.80 | Psest_1339 | | ATP-dependent helicase HrpA | 0.90 | Psest_0711 | | ATP-dependent chaperone ClpB | low | > 67 |
| Marinobacter adhaerens HP15 | 0.49 | HP15_1863 | | RNA helicase, ATP-dependent DEAH box, HrpA type | 0.75 | HP15_529 | | protein disaggregation chaperone | low | > 73 |
| Shewanella oneidensis MR-1 | 0.48 | SO2229 | hrpA | ATP-dependent helicase HrpA (NCBI ptt file) | 0.70 | SO3577 | clpB | clpB protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.47 | Shewana3_1897 | | ATP-dependent helicase HrpA (RefSeq) | 0.70 | Shewana3_3169 | | ATPase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.47 | Shew_1767 | | ATP-dependent helicase HrpA (RefSeq) | 0.70 | Shew_2948 | | ATPase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.47 | Sama_1619 | | ATP-dependent helicase HrpA (RefSeq) | 0.70 | Sama_2603 | | clpB protein (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_13330 | | ATP-dependent RNA helicase HrpA | 0.69 | IAI46_03995 | | ATP-dependent chaperone ClpB | 0.40 | 48 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS12270 | | ATP-dependent RNA helicase HrpA | 0.69 | DDA3937_RS16100 | | ATP-dependent chaperone ClpB | low | > 74 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS12800 | | ATP-dependent RNA helicase HrpA | 0.69 | DZA65_RS17320 | | ATP-dependent chaperone ClpB | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_06950 | | ATP-dependent RNA helicase HrpA | 0.71 | CSW01_03705 | | chaperone protein ClpB | low | > 62 |
| Dickeya dianthicola 67-19 | 0.46 | HGI48_RS12360 | | ATP-dependent RNA helicase HrpA | 0.69 | HGI48_RS16225 | | ATP-dependent chaperone ClpB | low | > 71 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF2632 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | 0.70 | GFF4184 | | ClpB protein | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS09660 | | ATP-dependent RNA helicase HrpA | 0.70 | HER17_RS05410 | | ATP-dependent chaperone ClpB | low | > 75 |
| Pantoea sp. MT58 | 0.46 | IAI47_09520 | | ATP-dependent RNA helicase HrpA | 0.70 | IAI47_04435 | | ATP-dependent chaperone ClpB | low | > 76 |
| Rahnella sp. WP5 | 0.46 | EX31_RS06495 | | ATP-dependent RNA helicase HrpA | 0.69 | EX31_RS07560 | | ATP-dependent chaperone ClpB | low | > 89 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS08180 | | ATP-dependent RNA helicase HrpA | 0.70 | ECOLIN_RS14665 | | ATP-dependent chaperone ClpB | — | — |
| Escherichia fergusonii Becca | 0.46 | EFB2_02565 | | hypothetical protein | 0.70 | EFB2_01298 | | Chaperone protein ClpB | low | > 86 |
| Escherichia coli ECRC101 | 0.46 | MCAODC_16205 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | MCAODC_11795 | clpB | ATP-dependent chaperone ClpB | — | — |
| Escherichia coli ECRC98 | 0.46 | JDDGAC_04220 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | JDDGAC_24930 | clpB | ATP-dependent chaperone ClpB | — | — |
| Escherichia coli ECRC102 | 0.46 | NIAGMN_25865 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | NIAGMN_19035 | clpB | ATP-dependent chaperone ClpB | — | — |
| Escherichia coli ECRC99 | 0.46 | KEDOAH_26710 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | KEDOAH_06955 | clpB | ATP-dependent chaperone ClpB | — | — |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_1357 | | RNA helicase HrpA | 0.70 | EX28DRAFT_2693 | | ATP-dependent chaperone ClpB | low | > 76 |
| Escherichia coli ECRC101 | 0.46 | OKFHMN_01730 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | OKFHMN_21265 | clpB | ATP-dependent chaperone ClpB | — | — |
| Klebsiella michiganensis M5al | 0.46 | BWI76_RS13165 | | ATP-dependent RNA helicase HrpA | 0.70 | BWI76_RS21440 | | ATP-dependent chaperone ClpB | low | > 92 |
| Escherichia coli BL21 | 0.46 | ECD_01368 | | putative ATP-dependent helicase | 0.70 | ECD_02482 | | protein disaggregation chaperone | low | > 60 |
| Escherichia coli BW25113 | 0.46 | b1413 | hrpA | ATP-dependent helicase (RefSeq) | 0.70 | b2592 | clpB | protein disaggregation chaperone (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_19390 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | NOLOHH_12940 | clpB | ATP-dependent chaperone ClpB | — | — |
| Escherichia coli ECRC62 | 0.46 | BNILDI_17845 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | BNILDI_11745 | clpB | ATP-dependent chaperone ClpB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.46 | OHPLBJKB_02301 | | hypothetical protein | 0.70 | OHPLBJKB_01114 | | Chaperone protein ClpB | low | > 73 |
| Enterobacter sp. TBS_079 | 0.46 | MPMX20_02189 | | hypothetical protein | 0.70 | MPMX20_03461 | | Chaperone protein ClpB | low | > 85 |
| Escherichia coli ECOR38 | 0.46 | HEPCGN_26110 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | HEPCGN_20390 | clpB | ATP-dependent chaperone ClpB | low | > 85 |
| Alteromonas macleodii MIT1002 | 0.45 | MIT1002_01685 | | ATP-dependent RNA helicase HrpB | 0.71 | MIT1002_02677 | | Heat shock protein F84.1 | low | > 70 |
| Erwinia tracheiphila SCR3 | 0.44 | LU632_RS12630 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | LU632_RS16935 | clpB | ATP-dependent chaperone ClpB | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.41 | RR42_RS13030 | | ATP-dependent helicase | 0.64 | RR42_RS12455 | | protein disaggregation chaperone | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS11020 | | ATP-dependent RNA helicase HrpA | 0.64 | ABZR87_RS11485 | | ATP-dependent chaperone ClpB | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.41 | RS_RS06270 | | ATP-dependent RNA helicase HrpA | 0.64 | RS_RS06695 | | chaperone protein ClpB | low | > 80 |
| Dechlorosoma suillum PS | 0.41 | Dsui_1373 | | ATP-dependent helicase HrpA | 0.66 | Dsui_2161 | | ATP-dependent chaperone ClpB | low | > 51 |
| Ralstonia solanacearum IBSBF1503 | 0.41 | RALBFv3_RS15490 | | ATP-dependent RNA helicase HrpA | 0.65 | RALBFv3_RS00030 | | ATP-dependent chaperone ClpB | low | > 76 |
| Ralstonia solanacearum UW163 | 0.41 | UW163_RS12950 | | ATP-dependent RNA helicase HrpA | 0.65 | UW163_RS13360 | | ATP-dependent chaperone ClpB | — | — |
| Ralstonia solanacearum PSI07 | 0.41 | RPSI07_RS17865 | | ATP-dependent RNA helicase HrpA | 0.64 | RPSI07_RS17450 | | ATP-dependent chaperone ClpB | low | > 81 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS16615 | | ATP-dependent RNA helicase HrpA | 0.64 | ABID97_RS10930 | | ATP-dependent chaperone ClpB | low | > 91 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS12980 | | ATP-dependent helicase | 0.67 | BPHYT_RS08990 | | protein disaggregation chaperone | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS02420 | | ATP-dependent RNA helicase HrpA | 0.62 | ABCV34_RS06205 | | ATP-dependent chaperone ClpB | low | > 48 |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS17315 | | ATP-dependent helicase | 0.65 | HSERO_RS10545 | | protein disaggregation chaperone | low | > 78 |
| Kangiella aquimarina DSM 16071 | 0.39 | B158DRAFT_1779 | | ATP-dependent helicase HrpA | 0.70 | B158DRAFT_2535 | | ATP-dependent chaperone ClpB | low | > 40 |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_002813 | | ATP-dependent helicase HrpA | 0.67 | ABIE53_002033 | | ATP-dependent Clp protease ATP-binding subunit ClpB | low | > 113 |
| Variovorax sp. SCN45 | 0.38 | GFF247 | | ATP-dependent helicase HrpA | 0.64 | GFF2792 | | Chaperone protein ClpB (ATP-dependent unfoldase) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_896 | | macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. | 0.64 | Ac3H11_1474 | | ClpB protein | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF4301 | | macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. | 0.65 | GFF3942 | | ClpB protein | low | > 90 |
| Dyella japonica UNC79MFTsu3.2 | 0.38 | ABZR86_RS19720 | | ATP-dependent RNA helicase HrpA | 0.70 | ABZR86_RS10940 | | ATP-dependent chaperone ClpB | low | > 74 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS05155 | | ATP-dependent RNA helicase HrpA | 0.72 | ABIE51_RS04925 | | ATP-dependent chaperone ClpB | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_02008 | | hypothetical protein | 0.66 | MPMX26_01096 | | Chaperone protein ClpB | low | > 36 |
| Paraburkholderia sabiae LMG 24235 | 0.36 | QEN71_RS05625 | | ATP-dependent RNA helicase HrpA | 0.68 | QEN71_RS22370 | | ATP-dependent chaperone ClpB | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_00445 | | ATP-dependent helicase HrpA | 0.67 | H281DRAFT_00817 | | ATP-dependent Clp protease ATP-binding subunit ClpB | low | > 103 |
| Rhodanobacter sp. FW510-T8 | 0.35 | OKGIIK_02155 | hrpA | ATP-dependent RNA helicase HrpA | 0.70 | OKGIIK_01800 | clpB | ATP-dependent chaperone ClpB | low | > 52 |
| Bifidobacterium breve UCC2003 | 0.32 | BBR_RS17010 | | DUF3418 domain-containing protein | 0.52 | BBR_RS19700 | | ATP-dependent chaperone ClpB | low | > 34 |
Not shown: 0 genomes with orthologs for PS417_20575 only; 33 genomes with orthologs for PS417_03830 only