Conservation of cofitness between PS417_13100 and PS417_03560 in Pseudomonas simiae WCS417

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_13100 ABC transporter ATP-binding protein 1.0 PS417_03560 GTP-binding protein 0.22 7
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS13740 ABC-F family ATPase 0.98 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS13740 ABC-F family ATPase 0.98 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_3023 ABC transporter ATP-binding protein uup 0.97 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF low > 87
Pseudomonas sp. RS175 0.93 PFR28_01696 putative ABC transporter ATP-binding protein YbiT 0.96 PFR28_03664 Ribosome-binding ATPase YchF low > 88
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_27740 ABC transporter ATP-binding protein 0.97 AO356_16450 GTP-binding protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_2495 ABC transporter 0.96 Psyr_0941 Conserved hypothetical protein 92 low > 86
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_2495 ABC transporter 0.96 Psyr_0941 Conserved hypothetical protein 92 low > 86
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4749 ABC transporter ATP-binding protein uup 0.97 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF low > 87
Pseudomonas putida KT2440 0.93 PP_2936 putative ATP-binding component of a transport system 0.93 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.17 14
Pseudomonas sp. S08-1 0.93 OH686_00750 Bis-ABC ATPase YbiT 0.92 OH686_07965 GTP-binding and nucleic acid-binding protein YchF low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_2115 ATPase components of ABC transporters with duplicated ATPase domains 0.90 Psest_1103 GTP-binding protein YchF low > 67
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_26510 ABC transporter ATP-binding protein 0.97 AO353_14740 GTP-binding protein 0.19 54
Marinobacter adhaerens HP15 0.86 HP15_2628 ABC transporter ATP-binding protein-like protein 0.75 HP15_704 translation-associated GTPase low > 73
Shewanella amazonensis SB2B 0.80 Sama_1386 ABC transporter, ATP-binding protein (RefSeq) 0.71 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 62
Serratia liquefaciens MT49 0.79 IAI46_07820 ABC-F family ATPase 0.68 IAI46_10240 redox-regulated ATPase YchF — —
Shewanella loihica PV-4 0.79 Shew_1676 ABC transporter-related protein (RefSeq) 0.69 Shew_2919 translation-associated GTPase (RefSeq) — —
Erwinia tracheiphila SCR3 0.79 LU632_RS09525 ABC-F family ATPase 0.71 LU632_RS13950 ychF redox-regulated ATPase YchF low > 74
Rahnella sp. WP5 0.78 EX31_RS18775 ABC-F family ATPase 0.69 EX31_RS07380 redox-regulated ATPase YchF low > 89
Pectobacterium carotovorum WPP14 0.77 HER17_RS07215 ABC-F family ATPase 0.70 HER17_RS10445 redox-regulated ATPase YchF low > 75
Escherichia coli BW25113 0.77 b0820 ybiT fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.71 b1203 ychF translation-associated GTPase (NCBI) — —
Escherichia fergusonii Becca 0.77 EFB2_03285 putative ABC transporter ATP-binding protein YbiT 0.71 EFB2_02724 Ribosome-binding ATPase YchF low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02893 putative ABC transporter ATP-binding protein YbiT 0.71 OHPLBJKB_02484 Ribosome-binding ATPase YchF low > 73
Escherichia coli Nissle 1917 0.77 ECOLIN_RS04370 ABC-F family ATPase 0.71 ECOLIN_RS07280 redox-regulated ATPase YchF — —
Escherichia coli BL21 0.77 ECD_00787 ABC-F family putative regulatory ATPase 0.71 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated — —
Pantoea sp. MT58 0.77 IAI47_13150 ABC-F family ATPase 0.71 IAI47_11310 redox-regulated ATPase YchF low > 76
Dickeya dianthicola 67-19 0.77 HGI48_RS14235 ABC-F family ATPase 0.71 HGI48_RS10975 redox-regulated ATPase YchF low > 71
Escherichia coli ECRC98 0.77 JDDGAC_09795 ybiT ABC-F family ATPase 0.71 JDDGAC_06165 ychF redox-regulated ATPase YchF — —
Escherichia coli ECRC101 0.77 OKFHMN_06160 ybiT ABC-F family ATPase 0.71 OKFHMN_28410 ychF redox-regulated ATPase YchF — —
Escherichia coli ECRC99 0.77 KEDOAH_21750 ybiT ABC-F family ATPase 0.71 KEDOAH_25405 ychF redox-regulated ATPase YchF — —
Escherichia coli ECRC102 0.77 NIAGMN_04205 ybiT ABC-F family ATPase 0.71 NIAGMN_27825 ychF redox-regulated ATPase YchF — —
Escherichia coli ECRC101 0.77 MCAODC_25375 ybiT ABC-F family ATPase 0.71 MCAODC_21850 ychF redox-regulated ATPase YchF — —
Escherichia coli ECOR38 0.77 HEPCGN_01880 ybiT ABC-F family ATPase 0.71 HEPCGN_24875 ychF redox-regulated ATPase YchF — —
Escherichia coli ECOR27 0.77 NOLOHH_22510 ybiT ABC-F family ATPase 0.71 NOLOHH_20650 ychF redox-regulated ATPase YchF — —
Escherichia coli ECRC62 0.77 BNILDI_20790 ybiT ABC-F family ATPase 0.72 BNILDI_18805 ychF redox-regulated ATPase YchF — —
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2147 ATPase components of ABC transporters with duplicated ATPase domains 0.69 EX28DRAFT_0821 GTP-binding protein YchF — —
Enterobacter sp. TBS_079 0.77 MPMX20_01457 putative ABC transporter ATP-binding protein YbiT 0.69 MPMX20_02645 Ribosome-binding ATPase YchF low > 85
Dickeya dianthicola ME23 0.77 DZA65_RS14910 ABC-F family ATPase 0.71 DZA65_RS11435 redox-regulated ATPase YchF low > 75
Shewanella oneidensis MR-1 0.77 SO1690 ABC transporter, ATP-binding protein (NCBI ptt file) 0.72 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS09040 ABC-F family ATPase 0.69 BWI76_RS17485 GTP-binding protein YchF — —
Shewanella sp. ANA-3 0.76 Shewana3_2760 ABC transporter related (RefSeq) 0.72 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF717 Putative ATPase component of ABC transporter with duplicated ATPase domain 0.71 GFF2784 GTP-binding and nucleic acid-binding protein YchF low > 78
Dickeya dadantii 3937 0.76 DDA3937_RS14260 ABC-F family ATPase 0.71 DDA3937_RS11035 redox-regulated ATPase YchF low > 74
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_07630 ABC-F family ATPase 0.69 CSW01_10875 redox-regulated ATPase YchF low > 62
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS11480 heme ABC transporter ATP-binding protein 0.67 BPHYT_RS17445 GTP-binding protein YchF 0.43 28
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS11060 ABC transporter ATP-binding protein 0.63 HSERO_RS20405 GTP-binding protein YchF — —
Ralstonia solanacearum PSI07 0.68 RPSI07_RS16870 ABC-F family ATPase 0.64 RPSI07_RS10660 redox-regulated ATPase YchF low > 81
Paraburkholderia graminis OAS925 0.68 ABIE53_002379 ATPase subunit of ABC transporter with duplicated ATPase domains 0.67 ABIE53_003650 GTP-binding protein YchF 0.43 3
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS00635 ABC-F family ATPase 0.64 RALBFv3_RS06570 redox-regulated ATPase YchF low > 76
Ralstonia solanacearum GMI1000 0.67 RS_RS07315 ABC-F family ATPase 0.65 RS_RS14520 redox-regulated ATPase YchF low > 80
Ralstonia solanacearum UW163 0.67 UW163_RS13965 ABC-F family ATPase 0.64 UW163_RS07055 redox-regulated ATPase YchF — —
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_05171 ATPase components of ABC transporters with duplicated ATPase domains 0.67 H281DRAFT_05705 hypothetical protein low > 103
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS11370 ABC transporter ATP-binding protein 0.65 RR42_RS18365 GTP-binding protein low > 128
Dechlorosoma suillum PS 0.67 Dsui_0753 ATPase component of ABC transporters with duplicated ATPase domain 0.63 Dsui_1039 GTP-binding protein YchF — —
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS12165 ABC-F family ATPase 0.65 ABZR87_RS02220 redox-regulated ATPase YchF 0.60 1
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS07090 ABC-F family ATPase 0.65 QEN71_RS27600 redox-regulated ATPase YchF 0.84 119
Alteromonas macleodii MIT1002 0.65 MIT1002_00912 putative ABC transporter ATP-binding protein YheS 0.69 MIT1002_01504 Ribosome-binding ATPase YchF low > 70
Castellaniella sp019104865 MT123 0.64 ABCV34_RS03000 ABC-F family ATPase 0.66 ABCV34_RS09215 redox-regulated ATPase YchF — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_06580 ABC-F family ATPase 0.59 CA264_07495 GTP-binding protein YchF low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.46 ABZR88_RS07070 ABC-F family ATP-binding cassette domain-containing protein 0.58 ABZR88_RS14155 redox-regulated ATPase YchF low > 71
Fusobacterium nucleatum SB010 0.45 HUW76_03735 ATP-binding cassette domain-containing protein 0.56 HUW76_08540 redox-regulated ATPase YchF low > 35
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS15635 ATP-binding cassette domain-containing protein 0.57 HMPREF1078_RS06345 redox-regulated ATPase YchF low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_3351 ATPase components of ABC transporters with duplicated ATPase domains 0.57 Echvi_2525 GTP-binding protein YchF 0.45 8
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS04050 ATP-binding cassette domain-containing protein 0.53 HMPREF1181_RS02000 redox-regulated ATPase YchF low > 56
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS12875 ABC-F family ATPase 0.57 CA265_RS13275 redox-regulated ATPase YchF low > 88
Bacteroides ovatus ATCC 8483 0.43 BACOVA_00551 ABC transporter, ATP-binding protein 0.58 BACOVA_02821 GTP-binding protein YchF — —
Bacteroides thetaiotaomicron VPI-5482 0.43 BT1242 ABC transporter ATP-binding protein (NCBI ptt file) 0.58 BT3116 GTP-binding protein (NCBI ptt file) — —
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS15690 ATP-binding cassette domain-containing protein 0.57 HMPREF1058_RS11490 redox-regulated ATPase YchF low > 67
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS11680 ATP-binding cassette domain-containing protein 0.57 ABI39_RS05450 redox-regulated ATPase YchF low > 72
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_0941 ATPase 0.51 Synpcc7942_0554 ychF translation-associated GTPase low > 38

Not shown: 1 genomes with orthologs for PS417_13100 only; 31 genomes with orthologs for PS417_03560 only