Conservation of cofitness between GFF3390 and GFF517 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3390 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 1.0 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.45 13
Escherichia coli ECOR38 0.93 HEPCGN_23980 nagZ beta-N-acetylhexosaminidase 0.94 HEPCGN_15325 prlC oligopeptidase A 0.69 13
Escherichia coli ECRC62 0.93 BNILDI_19195 nagZ beta-N-acetylhexosaminidase 0.93 BNILDI_03210 prlC oligopeptidase A low > 75
Escherichia coli ECOR27 0.93 NOLOHH_21035 nagZ beta-N-acetylhexosaminidase 0.93 NOLOHH_08350 prlC oligopeptidase A low > 75
Escherichia coli ECRC99 0.92 KEDOAH_24250 nagZ beta-N-acetylhexosaminidase 0.94 KEDOAH_11730 prlC oligopeptidase A — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02559 Beta-hexosaminidase 0.94 OHPLBJKB_00205 Oligopeptidase A 0.31 65
Escherichia coli ECRC100 0.92 OKFHMN_03505 nagZ beta-N-acetylhexosaminidase 0.94 OKFHMN_16415 prlC oligopeptidase A low > 80
Escherichia fergusonii Becca 0.92 EFB2_02868 Beta-hexosaminidase 0.94 EFB2_00317 Oligopeptidase A low > 86
Escherichia coli ECRC101 0.92 MCAODC_22865 nagZ beta-N-acetylhexosaminidase 0.94 MCAODC_06930 prlC oligopeptidase A low > 87
Escherichia coli ECRC102 0.92 NIAGMN_24325 nagZ beta-N-acetylhexosaminidase 0.94 NIAGMN_14180 prlC oligopeptidase A — —
Escherichia coli ECRC98 0.92 JDDGAC_07165 nagZ beta-N-acetylhexosaminidase 0.94 JDDGAC_20045 prlC oligopeptidase A low > 86
Escherichia coli BL21 0.92 ECD_01103 beta N-acetyl-glucosaminidase 0.93 ECD_03347 oligopeptidase A low > 61
Escherichia coli BW25113 0.92 b1107 nagZ beta-hexosaminidase (NCBI) 0.94 b3498 prlC oligopeptidase A (NCBI) low > 76
Escherichia coli Nissle 1917 0.92 ECOLIN_RS06390 beta-N-acetylhexosaminidase 0.94 ECOLIN_RS19985 oligopeptidase A low > 55
Enterobacter asburiae PDN3 0.88 EX28DRAFT_1823 Beta-glucosidase-related glycosidases 0.93 EX28DRAFT_4063 Zn-dependent oligopeptidases low > 76
Enterobacter sp. TBS_079 0.87 MPMX20_01788 Beta-hexosaminidase 0.93 MPMX20_04397 Oligopeptidase A low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS11165 beta-N-acetylhexosaminidase 0.92 BWI76_RS26610 oligopeptidase A low > 92
Serratia liquefaciens MT49 0.77 IAI46_09900 beta-N-acetylhexosaminidase 0.83 IAI46_24210 oligopeptidase A 0.55 60
Pectobacterium carotovorum WPP14 0.76 HER17_RS08725 beta-N-acetylhexosaminidase 0.85 HER17_RS21300 oligopeptidase A low > 75
Pantoea sp. MT58 0.75 IAI47_11995 beta-N-acetylhexosaminidase 0.87 IAI47_01345 oligopeptidase A low > 76
Dickeya dianthicola 67-19 0.73 HGI48_RS13115 beta-N-acetylhexosaminidase 0.82 HGI48_RS00045 oligopeptidase A low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS13585 beta-N-acetylhexosaminidase 0.83 DZA65_RS00035 oligopeptidase A low > 75
Rahnella sp. WP5 0.72 EX31_RS24500 beta-N-acetylhexosaminidase 0.82 EX31_RS05165 oligopeptidase A low > 89
Erwinia tracheiphila SCR3 0.72 LU632_RS14755 nagZ beta-N-acetylhexosaminidase 0.86 LU632_RS19470 prlC oligopeptidase A low > 74
Dickeya dadantii 3937 0.72 DDA3937_RS13050 beta-N-acetylhexosaminidase 0.83 DDA3937_RS21265 oligopeptidase A low > 74
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_03620 beta-hexosaminidase 0.72 CSW01_01010 oligopeptidase A low > 62
Shewanella sp. ANA-3 0.45 Shewana3_2293 beta-hexosaminidase (RefSeq) 0.65 Shewana3_4051 oligopeptidase A (RefSeq) low > 73
Shewanella oneidensis MR-1 0.44 SO2250 nagZ beta-hexosaminidase (NCBI ptt file) 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.44 Shew_1626 beta-hexosaminidase (RefSeq) 0.67 Shew_3657 oligopeptidase A (RefSeq) low > 60
Shewanella amazonensis SB2B 0.43 Sama_1326 beta-hexosaminidase (RefSeq) 0.65 Sama_3546 oligopeptidase A (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_1585 Beta-glucosidase-related glycosidases 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases low > 40
Pseudomonas sp. S08-1 0.42 OH686_21975 beta-N-acetylglucosaminidase 0.56 OH686_12360 Oligopeptidase A low > 80
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_00455 beta-hexosaminidase 0.56 AO353_10775 oligopeptidase A low > 101
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4031 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.56 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.36 66
Alteromonas macleodii MIT1002 0.40 MIT1002_01643 Beta-hexosaminidase 0.64 MIT1002_03633 Oligopeptidase A low > 70
Pseudomonas stutzeri RCH2 0.40 Psest_2643 Beta-glucosidase-related glycosidases 0.57 Psest_4320 Zn-dependent oligopeptidases low > 67
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3912 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) — —
Pseudomonas putida KT2440 0.40 PP_2145 beta-N-acetylglucosaminidase 0.57 PP_0096 oligopeptidase A low > 96
Acinetobacter radioresistens SK82 0.40 MPMX26_00420 Beta-hexosaminidase 0.46 MPMX26_02685 Oligopeptidase A low > 36
Pseudomonas sp. RS175 0.40 PFR28_01119 Beta-hexosaminidase 0.57 PFR28_04699 Oligopeptidase A low > 88
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS07695 beta-N-acetylhexosaminidase 0.57 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens SBW25 0.39 PFLU_RS07695 beta-N-acetylhexosaminidase 0.57 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2281 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.57 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) low > 103
Pseudomonas simiae WCS417 0.39 PS417_07620 beta-hexosaminidase 0.57 PS417_00245 oligopeptidase A low > 88
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_02285 beta-hexosaminidase 0.57 AO356_11120 oligopeptidase A low > 104
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3281 Glycoside hydrolase, family 3, N-terminal 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3281 Glycoside hydrolase, family 3, N-terminal 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A — —
Dechlorosoma suillum PS 0.38 Dsui_2465 beta-glucosidase-like glycosyl hydrolase 0.49 Dsui_0046 Zn-dependent oligopeptidase low > 51
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS14015 beta-hexosaminidase 0.47 RR42_RS07340 oligopeptidase A low > 128
Castellaniella sp019104865 MT123 0.37 ABCV34_RS06985 beta-N-acetylhexosaminidase 0.43 ABCV34_RS04180 M3 family metallopeptidase — —
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS10230 beta-N-acetylhexosaminidase 0.47 ABZR87_RS13490 M3 family metallopeptidase low > 80
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS07110 beta-N-acetylhexosaminidase 0.49 ABZR86_RS14940 M3 family metallopeptidase — —
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS09685 beta-hexosaminidase 0.49 HSERO_RS07290 oligopeptidase A — —
Ralstonia solanacearum UW163 0.36 UW163_RS11975 beta-N-acetylhexosaminidase 0.47 UW163_RS15000 oligopeptidase A — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS14510 beta-N-acetylhexosaminidase 0.47 RALBFv3_RS01690 oligopeptidase A low > 76
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_07830 nagZ beta-N-acetylhexosaminidase 0.50 OKGIIK_15380 dcp oligopeptidase A — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS18950 beta-N-acetylhexosaminidase 0.46 RPSI07_RS15795 oligopeptidase A low > 81
Ralstonia solanacearum GMI1000 0.35 RS_RS05290 beta-N-acetylhexosaminidase 0.47 RS_RS08035 oligopeptidase A low > 80
Paraburkholderia graminis OAS925 0.34 ABIE53_003031 beta-N-acetylhexosaminidase 0.48 ABIE53_002798 oligopeptidase A low > 113
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS17010 beta-N-acetylhexosaminidase 0.48 LRK54_RS08615 M3 family metallopeptidase — —
Rhodanobacter denitrificans MT42 0.34 LRK55_RS16725 beta-N-acetylhexosaminidase 0.48 LRK55_RS08380 M3 family metallopeptidase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04367 beta-N-acetylhexosaminidase 0.47 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A low > 103
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS14345 beta-hexosaminidase 0.48 BPHYT_RS12875 oligopeptidase A low > 109
Acidovorax sp. GW101-3H11 0.33 Ac3H11_1561 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) low > 79
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS04635 beta-N-acetylhexosaminidase 0.49 QEN71_RS05695 M3 family metallopeptidase low > 153
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.3663.1 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) low > 74
Variovorax sp. OAS795 0.32 ABID97_RS08390 beta-N-acetylhexosaminidase 0.45 ABID97_RS14080 M3 family metallopeptidase low > 91
Variovorax sp. SCN45 0.31 GFF3875 beta-N-acetylglucosaminidase (EC 3.2.1.52) 0.45 GFF963 Oligopeptidase A (EC 3.4.24.70) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3351 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 0.44 GFF4214 Oligopeptidase A (EC 3.4.24.70) low > 90

Not shown: 15 genomes with orthologs for GFF3390 only; 7 genomes with orthologs for GFF517 only