Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Variovorax sp. SCN45 | 1.0 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 1.0 | GFF450 | | Outer membrane vitamin B12 receptor BtuB | 0.92 | 9 |
Variovorax sp. OAS795 | 0.95 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.78 | ABID97_RS17425 | | TonB-dependent receptor | low | > 91 |
Acidovorax sp. GW101-3H11 | 0.82 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.58 | Ac3H11_985 | | Outer membrane vitamin B12 receptor BtuB | low | > 79 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.78 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.50 | GFF3976 | | Outer membrane vitamin B12 receptor BtuB | — | — |
Ralstonia solanacearum UW163 | 0.66 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | UW163_RS09175 | | TonB-dependent receptor | — | — |
Ralstonia solanacearum IBSBF1503 | 0.66 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | RALBFv3_RS04495 | | TonB-dependent receptor | low | > 76 |
Ralstonia solanacearum PSI07 | 0.65 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.20 | RPSI07_RS12875 | | TonB-dependent receptor | low | > 81 |
Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.22 | ABZR87_RS00095 | | TonB-dependent receptor | low | > 80 |
Ralstonia solanacearum GMI1000 | 0.65 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.20 | RS_RS12050 | | TonB-dependent receptor | low | > 80 |
Paraburkholderia graminis OAS925 | 0.64 | ABIE53_000061 | | methylenetetrahydrofolate reductase (NADPH) | 0.21 | ABIE53_001246 | | vitamin B12 transporter | low | > 113 |
Burkholderia phytofirmans PsJN | 0.64 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | 0.20 | BPHYT_RS04850 | | TonB-denpendent receptor | low | > 109 |
Paraburkholderia bryophila 376MFSha3.1 | 0.64 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | 0.20 | H281DRAFT_00136 | | vitamin B12 transporter | low | > 103 |
Cupriavidus basilensis FW507-4G11 | 0.64 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | 0.20 | RR42_RS16140 | | TonB-dependent receptor | low | > 128 |
Paraburkholderia sabiae LMG 24235 | 0.64 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | QEN71_RS25145 | | TonB-dependent receptor | low | > 153 |
Pseudomonas putida KT2440 | 0.60 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | 0.16 | PP_0525 | | TonB-dependent receptor, B12 family | low | > 96 |
Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.16 | Pf6N2E2_4930 | | Outer membrane vitamin B12 receptor BtuB | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | 0.15 | AO356_14985 | | TonB-dependent receptor | low | > 104 |
Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.15 | PFLU_RS26850 | | TonB-dependent receptor | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.15 | PFLU_RS26850 | | TonB-dependent receptor | low | > 109 |
Pseudomonas sp. RS175 | 0.58 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | 0.15 | PFR28_03938 | | Vitamin B12 transporter BtuB | low | > 88 |
Pseudomonas sp. S08-1 | 0.58 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.18 | OH686_15755 | | Outer membrane vitamin B12 receptor BtuB | low | > 80 |
Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.17 | PfGW456L13_1324 | | Outer membrane vitamin B12 receptor BtuB | low | > 87 |
Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | 0.16 | AO353_06660 | | TonB-dependent receptor | low | > 101 |
Lysobacter sp. OAE881 | 0.58 | ABIE51_RS16490 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | ABIE51_RS18005 | | TonB-dependent vitamin B12 receptor | low | > 62 |
Pseudomonas simiae WCS417 | 0.57 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | 0.16 | PS417_25210 | | TonB-dependent receptor | low | > 88 |
Pseudomonas stutzeri RCH2 | 0.57 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.22 | Psest_3016 | | TonB-dependent vitamin B12 receptor | low | > 67 |
Pseudomonas fluorescens FW300-N1B4 | 0.57 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.17 | Pf1N1B4_2660 | | Outer membrane vitamin B12 receptor BtuB | low | > 87 |
Marinobacter adhaerens HP15 | 0.56 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | 0.16 | HP15_3953 | | outer membrane receptor for transport of vitamin B | low | > 73 |
Dyella japonica UNC79MFTsu3.2 | 0.56 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.23 | ABZR86_RS14720 | | TonB-dependent vitamin B12 receptor | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.56 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | 0.23 | OKGIIK_05465 | btuB | TonB-dependent vitamin B12 receptor | low | > 52 |
Rhodanobacter denitrificans FW104-10B01 | 0.55 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.20 | LRK54_RS07830 | | TonB-dependent vitamin B12 receptor | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.55 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.20 | LRK55_RS07560 | | TonB-dependent vitamin B12 receptor | low | > 63 |
Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.23 | ABCV34_RS14545 | | TonB-dependent receptor | low | > 48 |
Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.22 | Xcc-8004.1388.1 | | Outer membrane vitamin B12 receptor BtuB | low | > 74 |
Serratia liquefaciens MT49 | 0.38 | IAI46_24530 | | methylenetetrahydrofolate reductase | 0.17 | IAI46_24450 | | TonB-dependent vitamin B12 receptor BtuB | low | > 86 |
Enterobacter sp. TBS_079 | 0.37 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.16 | MPMX20_04514 | | Vitamin B12 transporter BtuB | 0.50 | 78 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.37 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.17 | GFF2352 | | Outer membrane vitamin B12 receptor BtuB | low | > 78 |
Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.16 | EX28DRAFT_4429 | | TonB-dependent vitamin B12 receptor | low | > 76 |
Rahnella sp. WP5 | 0.36 | EX31_RS14205 | | methylenetetrahydrofolate reductase | 0.18 | EX31_RS14135 | | TonB-dependent vitamin B12 receptor BtuB | low | > 89 |
Pantoea sp. MT58 | 0.36 | IAI47_00890 | | methylenetetrahydrofolate reductase | 0.15 | IAI47_00955 | | TonB-dependent vitamin B12 receptor BtuB | 0.79 | 6 |
Escherichia fergusonii Becca | 0.36 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | 0.15 | EFB2_04644 | | Vitamin B12 transporter BtuB | low | > 86 |
Dickeya dadantii 3937 | 0.36 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | 0.18 | DDA3937_RS00995 | | TonB-dependent vitamin B12 receptor BtuB | low | > 74 |
Escherichia coli Nissle 1917 | 0.36 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | 0.16 | ECOLIN_RS22905 | | TonB-dependent vitamin B12 receptor BtuB | low | > 55 |
Escherichia coli ECRC98 | 0.36 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | 0.16 | JDDGAC_17155 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 86 |
Dickeya dianthicola 67-19 | 0.36 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | 0.17 | HGI48_RS20380 | | TonB-dependent vitamin B12 receptor BtuB | low | > 71 |
Dickeya dianthicola ME23 | 0.36 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | 0.18 | DZA65_RS21425 | | TonB-dependent vitamin B12 receptor BtuB | low | > 75 |
Escherichia coli ECRC99 | 0.36 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | 0.16 | KEDOAH_14630 | btuB | TonB-dependent vitamin B12 receptor BtuB | — | — |
Escherichia coli ECRC101 | 0.36 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | 0.16 | MCAODC_04030 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 87 |
Escherichia coli ECRC100 | 0.36 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | 0.16 | OKFHMN_13530 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 80 |
Escherichia coli ECRC102 | 0.36 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | 0.16 | NIAGMN_11280 | btuB | TonB-dependent vitamin B12 receptor BtuB | — | — |
Escherichia coli ECOR38 | 0.36 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | 0.15 | HEPCGN_12185 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 87 |
Escherichia coli ECOR27 | 0.36 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | 0.15 | NOLOHH_05675 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 75 |
Escherichia coli ECRC62 | 0.36 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | 0.15 | BNILDI_05850 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.36 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | 0.15 | OHPLBJKB_04084 | | Vitamin B12 transporter BtuB | low | > 73 |
Escherichia coli BL21 | 0.36 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | 0.11 | ECD_02084 | | colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter | low | > 61 |
Escherichia coli BW25113 | 0.36 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.15 | b3966 | btuB | vitamin B12/cobalamin outer membrane transporter (NCBI) | low | > 76 |
Klebsiella michiganensis M5al | 0.35 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | 0.17 | BWI76_RS00890 | | vitamin B12/cobalamin outer membrane transporter | 0.50 | 90 |
Rhodospirillum rubrum S1H | 0.35 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.11 | Rru_A0488 | | TonB-dependent receptor (NCBI) | low | > 58 |
Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | 0.11 | AZOBR_RS19160 | | outer membrane cobalamin receptor protein BtuB | low | > 97 |
Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_13560 | | methylenetetrahydrofolate reductase | 0.16 | CSW01_00790 | | vitamin B12 transporter BtuB | low | > 62 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.34 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.13 | A4249_RS12105 | | TonB-dependent receptor | 0.99 | 4 |
Shewanella sp. ANA-3 | 0.33 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.09 | Shewana3_1513 | | TonB-dependent receptor (RefSeq) | low | > 73 |
Alteromonas macleodii MIT1002 | 0.33 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | 0.09 | MIT1002_00716 | | Outer membrane cobalamin translocator | 0.88 | 9 |
Caulobacter crescentus NA1000 | 0.32 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.13 | CCNA_01826 | | vitamin B12 receptor | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.13 | CCNA_01826 | | vitamin B12 receptor | low | > 67 |
Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.07 | Dshi_0570 | | TonB-dependent receptor (RefSeq) | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.21 | Echvi_3637 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.08 | Echvi_3755 | | Outer membrane cobalamin receptor protein | low | > 79 |
Not shown: 31 genomes with orthologs for GFF2055 only; 2 genomes with orthologs for GFF450 only