| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF1923 | | Nitrogen regulatory protein P-II | 1.0 | GFF3928 | | LSU ribosomal protein L9p | 0.56 | 5 |
| Variovorax sp. SCN45 | 0.94 | GFF5120 | | Nitrogen regulatory protein P-II, GlnK | 0.61 | GFF2813 | | LSU ribosomal protein L9p | low | > 127 |
| Variovorax sp. OAS795 | 0.94 | ABID97_RS03630 | | P-II family nitrogen regulator | 0.62 | ABID97_RS10840 | | 50S ribosomal protein L9 | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.93 | Ac3H11_3402 | | Nitrogen regulatory protein P-II | 0.60 | Ac3H11_1514 | | LSU ribosomal protein L9p | low | > 79 |
| Burkholderia phytofirmans PsJN | 0.88 | BPHYT_RS02545 | | nitrogen regulatory protein P-II 1 | 0.57 | BPHYT_RS08870 | | 50S ribosomal protein L9 | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.88 | QEN71_RS01400 | | P-II family nitrogen regulator | 0.68 | QEN71_RS22490 | | 50S ribosomal protein L9 | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.88 | H281DRAFT_02013 | | nitrogen regulatory protein P-II family | 0.60 | H281DRAFT_00792 | | LSU ribosomal protein L9P | — | — |
| Herbaspirillum seropedicae SmR1 | 0.87 | HSERO_RS00420 | | nitrogen regulatory protein P-II 1 | 0.61 | HSERO_RS10385 | | 50S ribosomal protein L9 | — | — |
| Dechlorosoma suillum PS | 0.87 | Dsui_0764 | | nitrogen regulatory protein PII | 0.59 | Dsui_1992 | | ribosomal protein L9 | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.86 | MPMX26_00149 | | Nitrogen regulatory protein P-II 2 | 0.49 | MPMX26_01155 | | 50S ribosomal protein L9 | — | — |
| Ralstonia solanacearum GMI1000 | 0.85 | RS_RS01685 | | nitrogen regulatory protein P-II 1 | 0.61 | RS_RS06570 | | 50S ribosomal protein L9 | — | — |
| Ralstonia sp. UNC404CL21Col | 0.84 | ABZR87_RS06695 | | P-II family nitrogen regulator | 0.63 | ABZR87_RS11360 | | 50S ribosomal protein L9 | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.84 | RR42_RS01755 | | nitrogen regulatory protein P-II 1 | 0.63 | RR42_RS12590 | | 50S ribosomal protein L9 | low | > 128 |
| Dyella japonica UNC79MFTsu3.2 | 0.84 | ABZR86_RS13505 | | P-II family nitrogen regulator | 0.40 | ABZR86_RS08860 | | 50S ribosomal protein L9 | low | > 74 |
| Ralstonia solanacearum IBSBF1503 | 0.84 | RALBFv3_RS10845 | | nitrogen regulatory protein P-II 1 | 0.65 | RALBFv3_RS15790 | | 50S ribosomal protein L9 | — | — |
| Ralstonia solanacearum UW163 | 0.84 | UW163_RS02735 | | nitrogen regulatory protein P-II 1 | 0.65 | UW163_RS13235 | | 50S ribosomal protein L9 | — | — |
| Ralstonia solanacearum PSI07 | 0.84 | RPSI07_RS22465 | | nitrogen regulatory protein P-II 1 | 0.57 | RPSI07_RS17575 | | 50S ribosomal protein L9 | — | — |
| Rhodanobacter sp. FW510-T8 | 0.83 | OKGIIK_13340 | glnK | P-II family nitrogen regulator | 0.42 | OKGIIK_09590 | rplI | 50S ribosomal protein L9 | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.83 | LRK55_RS10205 | | P-II family nitrogen regulator | 0.41 | LRK55_RS02290 | | 50S ribosomal protein L9 | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.83 | LRK54_RS10565 | | P-II family nitrogen regulator | 0.41 | LRK54_RS02535 | | 50S ribosomal protein L9 | low | > 59 |
| Pseudomonas sp. S08-1 | 0.83 | OH686_13755 | | Nitrogen regulatory protein P-II, GlnK | 0.43 | OH686_15935 | | ribosomal protein L9 | — | — |
| Pseudomonas stutzeri RCH2 | 0.83 | Psest_3773 | | Nitrogen regulatory protein PII | 0.48 | Psest_0697 | | ribosomal protein L9 | — | — |
| Marinobacter adhaerens HP15 | 0.83 | HP15_275 | | nitrogen regulatory protein PII | 0.50 | HP15_628 | | 50S ribosomal protein L9 | — | — |
| Pseudomonas sp. RS175 | 0.82 | PFR28_04383 | | Nitrogen regulatory protein P-II 2 | 0.44 | PFR28_05135 | | 50S ribosomal protein L9 | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.82 | AO356_12700 | | transcriptional regulator | 0.43 | AO356_08585 | | 50S ribosomal protein L9 | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.82 | Pf6N2E2_4411 | | Nitrogen regulatory protein P-II, glnK | 0.43 | Pf6N2E2_3602 | | LSU ribosomal protein L9p | — | — |
| Pseudomonas fluorescens SBW25 | 0.82 | PFLU_RS29305 | | P-II family nitrogen regulator | 0.40 | PFLU_RS02650 | | 50S ribosomal protein L9 | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.82 | Pf1N1B4_2166 | | Nitrogen regulatory protein P-II, glnK | 0.43 | Pf1N1B4_1398 | | LSU ribosomal protein L9p | — | — |
| Pseudomonas putida KT2440 | 0.82 | PP_5234 | | activator of NRII(GlnL/NtrB) phosphatase | 0.44 | PP_4874 | | 50S ribosomal protein L9 | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.82 | AO353_09075 | | transcriptional regulator | 0.42 | AO353_13225 | | 50S ribosomal protein L9 | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.82 | PfGW456L13_837 | | Nitrogen regulatory protein P-II, glnK | 0.45 | PfGW456L13_139 | | LSU ribosomal protein L9p | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.82 | Psyr_0190 | | nitrogen regulatory protein P-II | 0.44 | Psyr_0584 | | LSU ribosomal protein L9P | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.82 | Psyr_0190 | | nitrogen regulatory protein P-II | 0.44 | Psyr_0584 | | LSU ribosomal protein L9P | — | — |
| Pseudomonas simiae WCS417 | 0.82 | PS417_27620 | | nitrogen regulatory protein P-II 1 | 0.40 | PS417_02580 | | 50S ribosomal protein L9 | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.82 | PFLU_RS29305 | | P-II family nitrogen regulator | 0.40 | PFLU_RS02650 | | 50S ribosomal protein L9 | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.82 | Xcc-8004.248.1 | | Nitrogen regulatory protein P-II | 0.41 | Xcc-8004.3313.1 | | LSU ribosomal protein L9p | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.80 | MIT1002_00416 | | Nitrogen regulatory protein P-II 2 | 0.45 | MIT1002_03816 | | 50S ribosomal protein L9 | low | > 70 |
| Shewanella amazonensis SB2B | 0.80 | Sama_0650 | | nitrogen regulatory protein P-II (RefSeq) | 0.41 | Sama_3061 | rplI | 50S ribosomal protein L9 (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.79 | Shew_0846 | | nitrogen regulatory protein P-II (RefSeq) | 0.45 | Shew_3281 | rplI | 50S ribosomal protein L9 (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.77 | SO3819 | | nitrogen regulatory protein P-II (NCBI ptt file) | 0.42 | SO3927 | rplI | ribosomal protein L9 (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.77 | Shewana3_3532 | | nitrogen regulatory protein P-II (RefSeq) | 0.38 | Shewana3_0704 | rplI | 50S ribosomal protein L9 (RefSeq) | — | — |
| Lysobacter sp. OAE881 | 0.76 | ABIE51_RS00145 | | P-II family nitrogen regulator | 0.42 | ABIE51_RS09230 | | 50S ribosomal protein L9 | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.74 | HER17_RS15790 | | P-II family nitrogen regulator | 0.45 | HER17_RS03905 | | 50S ribosomal protein L9 | — | — |
| Rahnella sp. WP5 | 0.74 | EX31_RS22315 | | P-II family nitrogen regulator | 0.45 | EX31_RS08745 | | 50S ribosomal protein L9 | low | > 89 |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS05695 | | P-II family nitrogen regulator | 0.49 | DDA3937_RS17215 | | 50S ribosomal protein L9 | — | — |
| Escherichia coli ECOR27 | 0.73 | NOLOHH_01200 | glnK | P-II family nitrogen regulator | 0.48 | NOLOHH_04360 | rplI | 50S ribosomal protein L9 | — | — |
| Escherichia coli BW25113 | 0.73 | b0450 | glnK | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | 0.48 | b4203 | rplI | 50S ribosomal protein L9 (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.73 | MCAODC_27490 | glnK | P-II family nitrogen regulator | 0.48 | MCAODC_02615 | rplI | 50S ribosomal protein L9 | — | — |
| Escherichia fergusonii Becca | 0.73 | EFB2_03607 | | Nitrogen regulatory protein P-II 2 | 0.48 | EFB2_04332 | | 50S ribosomal protein L9 | low | > 86 |
| Escherichia coli ECRC102 | 0.73 | NIAGMN_06320 | glnK | P-II family nitrogen regulator | 0.48 | NIAGMN_09950 | rplI | 50S ribosomal protein L9 | — | — |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS02695 | | P-II family nitrogen regulator | 0.48 | ECOLIN_RS24390 | | 50S ribosomal protein L9 | — | — |
| Escherichia coli ECOR38 | 0.73 | HEPCGN_06880 | glnK | P-II family nitrogen regulator | 0.48 | HEPCGN_10330 | rplI | 50S ribosomal protein L9 | — | — |
| Escherichia coli ECRC62 | 0.73 | BNILDI_22615 | glnK | P-II family nitrogen regulator | 0.48 | BNILDI_07125 | rplI | 50S ribosomal protein L9 | — | — |
| Escherichia coli BL21 | 0.73 | ECD_00402 | | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB | 0.48 | ECD_04070 | | 50S ribosomal subunit protein L9 | low | > 61 |
| Escherichia coli ECRC100 | 0.73 | OKFHMN_08265 | glnK | P-II family nitrogen regulator | 0.48 | OKFHMN_12100 | rplI | 50S ribosomal protein L9 | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_03223 | | Nitrogen regulatory protein P-II 2 | 0.48 | OHPLBJKB_03839 | | 50S ribosomal protein L9 | — | — |
| Escherichia coli ECRC98 | 0.73 | JDDGAC_11920 | glnK | P-II family nitrogen regulator | 0.48 | JDDGAC_15740 | rplI | 50S ribosomal protein L9 | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4367 | | Nitrogen regulatory protein P-II, glnK | 0.47 | GFF857 | | LSU ribosomal protein L9p | — | — |
| Escherichia coli ECRC99 | 0.73 | KEDOAH_19700 | glnK | P-II family nitrogen regulator | 0.48 | KEDOAH_16055 | rplI | 50S ribosomal protein L9 | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.70 | DvMF_0865 | | nitrogen regulatory protein P-II (RefSeq) | 0.28 | DvMF_1352 | rplI | 50S ribosomal protein L9 (RefSeq) | — | — |
| Mycobacterium tuberculosis H37Rv | 0.69 | Rv2919c | | Probable nitrogen regulatory protein P-II GlnB | 0.28 | Rv0056 | | 50S ribosomal protein L9 RplI | low | > 58 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.68 | DVU1232 | glnB-1 | nitrogen regulatory protein P-II (TIGR) | 0.30 | DVU0958 | rplI | ribosomal protein L9 (TIGR) | — | — |
| Bifidobacterium breve UCC2003 | 0.62 | BBR_RS11520 | | P-II family nitrogen regulator | 0.27 | BBR_RS11595 | | 50S ribosomal protein L9 | low | > 34 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1453 | | Nitrogen regulatory protein PII | 0.27 | Echvi_2386 | | ribosomal protein L9 | — | — |
Not shown: 15 genomes with orthologs for GFF1923 only; 23 genomes with orthologs for GFF3928 only