Conservation of cofitness between PS417_03560 and PS417_19835 in Pseudomonas simiae WCS417

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03560 GTP-binding protein 1.0 PS417_19835 flagellar biosynthesis protein FliS 0.29 20
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS03610 redox-regulated ATPase YchF 0.93 PFLU_RS21805 flagellar export chaperone FliS low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS03610 redox-regulated ATPase YchF 0.93 PFLU_RS21805 flagellar export chaperone FliS 0.65 97
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_16450 GTP-binding protein 0.61 AO356_03865 flagellar export chaperone FliS low > 104
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.57 Pf1N1B4_3597 Flagellar biosynthesis protein FliS low > 87
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_14740 GTP-binding protein 0.78 AO353_18650 flagellar export chaperone FliS low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.96 Psyr_0941 Conserved hypothetical protein 92 0.66 Psyr_3463 Flagellar protein FliS low > 86
Pseudomonas sp. RS175 0.96 PFR28_03664 Ribosome-binding ATPase YchF 0.61 PFR28_00826 Flagellar secretion chaperone FliS low > 88
Pseudomonas syringae pv. syringae B728a 0.96 Psyr_0941 Conserved hypothetical protein 92 0.66 Psyr_3463 Flagellar protein FliS low > 86
Pseudomonas putida KT2440 0.93 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.74 PP_4375 flagellar chaperone, inhibits premature FliC assembly low > 96
Pseudomonas sp. S08-1 0.92 OH686_07965 GTP-binding and nucleic acid-binding protein YchF 0.54 OH686_02865 flagellar protein FliS low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_1103 GTP-binding protein YchF 0.50 Psest_2504 flagellar biosynthetic protein FliS low > 67
Marinobacter adhaerens HP15 0.75 HP15_704 translation-associated GTPase 0.39 HP15_2368 flagellar protein FliS low > 73
Shewanella sp. ANA-3 0.72 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.39 Shewana3_1337 fliS flagellar protein FliS (RefSeq) 0.62 8
Shewanella oneidensis MR-1 0.72 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) 0.40 SO3233 fliS flagellar protein FliS (NCBI ptt file) low > 76
Escherichia coli ECRC62 0.72 BNILDI_18805 ychF redox-regulated ATPase YchF 0.27 BNILDI_15175 fliS flagellar export chaperone FliS — —
Shewanella amazonensis SB2B 0.71 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.40 Sama_2302 fliS flagellar protein FliS (RefSeq) 0.53 34
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.27 OHPLBJKB_01804 Flagellar secretion chaperone FliS low > 73
Escherichia coli ECRC101 0.71 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.27 OKFHMN_25765 fliS flagellar export chaperone FliS — —
Escherichia coli ECRC102 0.71 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.27 NIAGMN_02285 fliS flagellar export chaperone FliS — —
Escherichia coli ECOR27 0.71 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.27 NOLOHH_16385 fliS flagellar export chaperone FliS — —
Escherichia coli ECOR38 0.71 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.27 HEPCGN_04120 fliS flagellar export chaperone FliS — —
Escherichia coli BW25113 0.71 b1203 ychF translation-associated GTPase (NCBI) 0.26 b1925 fliS flagellar protein FliS (NCBI) — —
Escherichia coli ECRC101 0.71 MCAODC_21850 ychF redox-regulated ATPase YchF 0.27 MCAODC_19625 fliS flagellar export chaperone FliS — —
Escherichia coli ECRC98 0.71 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.27 JDDGAC_00355 fliS flagellar export chaperone FliS — —
Escherichia coli ECRC99 0.71 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.27 KEDOAH_02325 fliS flagellar export chaperone FliS — —
Escherichia fergusonii Becca 0.71 EFB2_02724 Ribosome-binding ATPase YchF 0.27 EFB2_02020 Flagellar secretion chaperone FliS low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS07280 redox-regulated ATPase YchF 0.27 ECOLIN_RS10990 flagellar export chaperone FliS — —
Erwinia tracheiphila SCR3 0.71 LU632_RS13950 ychF redox-regulated ATPase YchF 0.32 LU632_RS13845 fliS flagellar export chaperone FliS — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.34 GFF4027 Flagellar biosynthesis protein FliS 0.66 67
Dickeya dianthicola ME23 0.71 DZA65_RS11435 redox-regulated ATPase YchF 0.29 DZA65_RS13880 flagellar export chaperone FliS low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS11035 redox-regulated ATPase YchF 0.30 DDA3937_RS13350 flagellar export chaperone FliS low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS10975 redox-regulated ATPase YchF 0.29 HGI48_RS13395 flagellar export chaperone FliS low > 71
Pantoea sp. MT58 0.71 IAI47_11310 redox-regulated ATPase YchF 0.29 IAI47_08135 flagellar export chaperone FliS 0.29 63
Pectobacterium carotovorum WPP14 0.70 HER17_RS10445 redox-regulated ATPase YchF 0.34 HER17_RS08300 flagellar export chaperone FliS low > 75
Lysobacter sp. OAE881 0.69 ABIE51_RS05745 redox-regulated ATPase YchF 0.29 ABIE51_RS16735 flagellar export chaperone FliS low > 62
Enterobacter sp. TBS_079 0.69 MPMX20_02645 Ribosome-binding ATPase YchF 0.29 MPMX20_02856 Flagellar secretion chaperone FliS 0.61 2
Alteromonas macleodii MIT1002 0.69 MIT1002_01504 Ribosome-binding ATPase YchF 0.30 MIT1002_01057 Flagellar protein FliS low > 70
Rahnella sp. WP5 0.69 EX31_RS07380 redox-regulated ATPase YchF 0.32 EX31_RS09465 flagellar export chaperone FliS low > 89
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_10875 redox-regulated ATPase YchF 0.40 CSW01_10675 flagellar protein FliS low > 62
Shewanella loihica PV-4 0.69 Shew_2919 translation-associated GTPase (RefSeq) 0.43 Shew_1361 fliS flagellar protein FliS (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS22010 redox-regulated ATPase YchF 0.37 ABZR86_RS20140 flagellar export chaperone FliS low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_0821 GTP-binding protein YchF 0.28 EX28DRAFT_0621 flagellar biosynthetic protein FliS — —
Serratia liquefaciens MT49 0.68 IAI46_10240 redox-regulated ATPase YchF 0.34 IAI46_15800 flagellar export chaperone FliS — —
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.4168.1 GTP-binding and nucleic acid-binding protein YchF 0.32 Xcc-8004.2793.1 Flagellar biosynthesis protein FliS low > 74
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS17445 GTP-binding protein YchF 0.30 BPHYT_RS18765 flagellar biosynthesis protein FliS low > 109
Rhodanobacter sp. FW510-T8 0.67 OKGIIK_10565 Ribosome-binding ATPase YchF 0.42 OKGIIK_02720 fliS flagellar export chaperone FliS low > 52
Paraburkholderia graminis OAS925 0.67 ABIE53_003650 GTP-binding protein YchF 0.31 ABIE53_000072 flagellar protein FliS 0.46 36
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_05705 hypothetical protein 0.30 H281DRAFT_05788 flagellar protein FliS 0.32 87
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS03675 redox-regulated ATPase YchF 0.41 LRK54_RS13470 flagellar export chaperone FliS low > 59
Rhodanobacter denitrificans MT42 0.66 LRK55_RS03425 redox-regulated ATPase YchF 0.42 LRK55_RS13210 flagellar export chaperone FliS low > 63
Castellaniella sp019104865 MT123 0.66 ABCV34_RS09215 redox-regulated ATPase YchF 0.26 ABCV34_RS05620 flagellar export chaperone FliS — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF630 GTP-binding and nucleic acid-binding protein YchF 0.28 GFF1447 Flagellar biosynthesis protein FliS low > 90
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS27600 redox-regulated ATPase YchF 0.32 QEN71_RS28785 flagellar export chaperone FliS 0.83 34
Ralstonia solanacearum GMI1000 0.65 RS_RS14520 redox-regulated ATPase YchF 0.31 RS_RS19005 flagellar export chaperone FliS low > 80
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS02220 redox-regulated ATPase YchF 0.30 ABZR87_RS22165 flagellar export chaperone FliS low > 80
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS18365 GTP-binding protein 0.32 RR42_RS23640 flagellar biosynthesis protein FliS low > 128
Variovorax sp. SCN45 0.64 GFF2141 GTP-binding and nucleic acid-binding protein YchF 0.29 GFF5755 Flagellar biosynthesis protein FliS low > 127
Ralstonia solanacearum PSI07 0.64 RPSI07_RS10660 redox-regulated ATPase YchF 0.32 RPSI07_RS01505 flagellar export chaperone FliS low > 81
Ralstonia solanacearum UW163 0.64 UW163_RS07055 redox-regulated ATPase YchF 0.31 UW163_RS17570 flagellar export chaperone FliS — —
Acidovorax sp. GW101-3H11 0.64 Ac3H11_4001 GTP-binding and nucleic acid-binding protein YchF 0.29 Ac3H11_1401 Flagellar biosynthesis protein FliS — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS06570 redox-regulated ATPase YchF 0.31 RALBFv3_RS21620 flagellar export chaperone FliS low > 76
Dechlorosoma suillum PS 0.63 Dsui_1039 GTP-binding protein YchF 0.34 Dsui_1780 flagellar biosynthetic protein FliS — —
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS20405 GTP-binding protein YchF 0.30 HSERO_RS10340 flagellar biosynthesis protein FliS low > 78

Not shown: 37 genomes with orthologs for PS417_03560 only; 1 genomes with orthologs for PS417_19835 only