| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3339 | | Signal transduction histidine kinase | 1.0 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.38 | 5 |
| Pseudomonas sp. S08-1 | 0.69 | OH686_08685 | | Sensor histidine kinase PrrB (RegB) | 0.88 | OH686_10640 | | nitrogen regulation protein NR(I) | low | > 80 |
| Pseudomonas putida KT2440 | 0.66 | PP_0887 | | Sensor histidine kinase | 0.88 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.65 | PfGW456L13_5049 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.87 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_05340 | | histidine kinase | 0.87 | AO353_12145 | | nitrogen regulation protein NR(I) | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.64 | Pf6N2E2_3303 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.87 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | low | > 103 |
| Pseudomonas simiae WCS417 | 0.64 | PS417_04095 | | histidine kinase | 0.88 | PS417_01635 | | nitrogen regulation protein NR(I) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.64 | Psyr_4231 | | ATP-binding region, ATPase-like:Histidine kinase A, N-terminal | 0.88 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.64 | Psyr_4231 | | ATP-binding region, ATPase-like:Histidine kinase A, N-terminal | 0.88 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.64 | PFLU_RS04135 | | HAMP domain-containing histidine kinase | 0.88 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.64 | PFLU_RS04135 | | HAMP domain-containing histidine kinase | 0.88 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_1116 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.87 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.64 | AO356_07210 | | histidine kinase | 0.87 | AO356_09730 | | nitrogen regulation protein NR(I) | low | > 104 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_00136 | | Sensor histidine kinase RegB | 0.87 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.28 | ABZR86_RS10110 | | ATP-binding protein | 0.42 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | low | > 74 |
| Dechlorosoma suillum PS | 0.26 | Dsui_1181 | | signal transduction histidine kinase | 0.58 | Dsui_1051 | | nitrogen regulation protein NR(I) | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.24 | RR42_RS01090 | | histidine kinase | 0.56 | RR42_RS12980 | | chemotaxis protein CheY | low | > 128 |
| Rhodanobacter denitrificans MT42 | 0.24 | LRK55_RS03805 | | histidine kinase dimerization/phospho-acceptor domain-containing protein | 0.45 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.24 | LRK54_RS04035 | | ATP-binding protein | 0.45 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | low | > 59 |
| Ralstonia solanacearum PSI07 | 0.24 | RPSI07_RS23755 | | sensor histidine kinase | 0.56 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS05140 | | ATP-binding protein | 0.56 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.23 | RS_RS00195 | | sensor histidine kinase | 0.56 | RS_RS06320 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum UW163 | 0.23 | UW163_RS03970 | | sensor histidine kinase | 0.56 | UW163_RS13000 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.23 | RALBFv3_RS09610 | | sensor histidine kinase | 0.56 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | — | — |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_06180 | | Sensor histidine kinase RegB | 0.40 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | — | — |
| Rhodanobacter sp. FW510-T8 | 0.22 | OKGIIK_10895 | | Histidine kinase | 0.43 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | — | — |
| Variovorax sp. OAS795 | 0.21 | ABID97_RS07615 | | ATP-binding protein | 0.54 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | low | > 91 |
| Bosea sp. OAE506 | 0.21 | ABIE41_RS21045 | | ATP-binding protein | 0.38 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | low | > 77 |
| Paraburkholderia sabiae LMG 24235 | 0.21 | QEN71_RS00320 | | ATP-binding protein | 0.54 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | — | — |
| Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS23155 | | histidine kinase | 0.40 | AZOBR_RS14430 | | chemotaxis protein CheY | low | > 97 |
| Paraburkholderia graminis OAS925 | 0.20 | ABIE53_000419 | | two-component system sensor histidine kinase RegB | 0.54 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | low | > 113 |
| Variovorax sp. SCN45 | 0.20 | GFF5673 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.54 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.20 | HSERO_RS12295 | | histidine kinase | 0.58 | HSERO_RS15680 | | chemotaxis protein CheY | low | > 78 |
| Sphingomonas koreensis DSMZ 15582 | 0.20 | Ga0059261_1561 | | Signal transduction histidine kinase | 0.38 | Ga0059261_0137 | | nitrogen regulation protein NR(I) | low | > 68 |
| Burkholderia phytofirmans PsJN | 0.20 | BPHYT_RS01620 | | sensor histidine kinase | 0.54 | BPHYT_RS12935 | | chemotaxis protein CheY | low | > 109 |
| Shewanella loihica PV-4 | 0.19 | Shew_3343 | | integral membrane sensor signal transduction histidine kinase (RefSeq) | 0.66 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 60 |
| Lysobacter sp. OAE881 | 0.19 | ABIE51_RS09790 | | ATP-binding protein | 0.47 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.19 | HP15_3982 | | sensor signal transduction histidine kinase-like protein | 0.74 | HP15_425 | | two-component response regulator NtrC | low | > 73 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.18 | A4249_RS04470 | | ATP-binding protein | 0.32 | A4249_RS09115 | | sigma-54 dependent transcriptional regulator | low | > 48 |
| Shewanella oneidensis MR-1 | 0.18 | SO4173 | | sensor histidine kinase (NCBI ptt file) | 0.68 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | low | > 76 |
| Sinorhizobium meliloti 1021 | 0.18 | SMc02585 | | sensor histidine kinase transmembrane protein | 0.40 | SMc01043 | | nitrogen assimilation regulatory protein | — | — |
| Shewanella amazonensis SB2B | 0.18 | Sama_3187 | | sensor histidine kinase (RefSeq) | 0.67 | Sama_3427 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.18 | Xcc-8004.3040.1 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.47 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | low | > 74 |
| Caulobacter crescentus NA1000 Δfur | 0.17 | CCNA_01846 | | two-component sensor histidine kinase | 0.33 | CCNA_03424 | | AAA-family response regulator tacA | low | > 67 |
| Caulobacter crescentus NA1000 | 0.17 | CCNA_01846 | | two-component sensor histidine kinase | 0.33 | CCNA_03424 | | AAA-family response regulator tacA | low | > 66 |
| Agrobacterium fabrum C58 | 0.17 | Atu0051 | | two component sensor kinase | 0.39 | Atu1446 | | two component response regulator | low | > 89 |
| Shewanella sp. ANA-3 | 0.17 | Shewana3_3708 | | ATPase domain-containing protein (RefSeq) | 0.68 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 73 |
| Rhizobium sp. OAE497 | 0.17 | ABIE40_RS19510 | | ActS/PrrB/RegB family redox-sensitive histidine kinase | 0.39 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | low | > 107 |
| Phaeobacter inhibens DSM 17395 | 0.16 | PGA1_c35370 | | sensor histidine kinase RegB | 0.30 | PGA1_c14810 | | nitrogen assimilation regulatory protein NtrX | — | — |
| Dinoroseobacter shibae DFL-12 | 0.16 | Dshi_3432 | | integral membrane sensor signal transduction histidine kinase (RefSeq) | 0.30 | Dshi_1572 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_002965 | | ActS/PrrB/RegB family redox-sensitive histidine kinase | 0.37 | TX73_013420 | | nitrogen regulation protein NR(I) | low | > 86 |
Not shown: 2 genomes with orthologs for Psest_3339 only; 41 genomes with orthologs for Psest_3932 only