| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3338 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 1.0 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | 0.35 | 4 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_5048 | | Dna binding response regulator PrrA (RegA) | 0.86 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.88 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.88 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS04140 | | response regulator transcription factor | 0.86 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | 0.75 | 4 |
| Pseudomonas simiae WCS417 | 0.86 | PS417_04100 | | chemotaxis protein CheY | 0.86 | PS417_01640 | | histidine kinase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS04140 | | response regulator transcription factor | 0.86 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas sp. RS175 | 0.86 | PFR28_00137 | | Photosynthetic apparatus regulatory protein RegA | 0.86 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.86 | Pf1N1B4_1115 | | Dna binding response regulator PrrA (RegA) | 0.86 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.86 | AO353_05335 | | chemotaxis protein CheY | 0.86 | AO353_12150 | | histidine kinase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.85 | Pf6N2E2_3302 | | Dna binding response regulator PrrA (RegA) | 0.87 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.85 | AO356_07205 | | chemotaxis protein CheY | 0.87 | AO356_09725 | | histidine kinase | — | — |
| Pseudomonas sp. S08-1 | 0.84 | OH686_08680 | | Dna binding response regulator PrrA (RegA) | 0.87 | OH686_10635 | | Nitrogen regulation protein NtrB | low | > 80 |
| Pseudomonas putida KT2440 | 0.84 | PP_0888 | | Photosynthetic apparatus regulatory protein RegA | 0.86 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | low | > 96 |
| Dechlorosoma suillum PS | 0.59 | Dsui_1180 | | response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein | 0.41 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS10115 | | response regulator transcription factor | 0.31 | ABZR86_RS15510 | | ATP-binding protein | — | — |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_10900 | | two-component system response regulator | 0.29 | OKGIIK_14470 | | PAS domain-containing sensor histidine kinase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS04040 | | response regulator transcription factor | 0.27 | LRK54_RS07985 | | ATP-binding protein | — | — |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS03810 | | response regulator transcription factor | 0.26 | LRK55_RS07735 | | ATP-binding protein | low | > 63 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.50 | H281DRAFT_02208 | | two component transcriptional regulator, Fis family | 0.37 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | — | — |
| Burkholderia phytofirmans PsJN | 0.50 | BPHYT_RS01625 | | chemotaxis protein CheY | 0.36 | BPHYT_RS12940 | | signal transduction histidine kinase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.50 | ABIE53_000420 | | two-component system response regulator RegA | 0.37 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS00325 | | response regulator transcription factor | 0.36 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS13000 | | chemotaxis protein CheY | 0.40 | HSERO_RS15685 | | histidine kinase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS01085 | | chemotaxis protein CheY | 0.37 | RR42_RS12985 | | histidine kinase | low | > 128 |
| Dinoroseobacter shibae DFL-12 | 0.47 | Dshi_3430 | | two component transcriptional regulator, Fis family (RefSeq) | 0.23 | Dshi_1575 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS05135 | | response regulator transcription factor | 0.35 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS00200 | | DNA-binding response regulator | 0.37 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.45 | B158DRAFT_1932 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.29 | B158DRAFT_0715 | | Signal transduction histidine kinase, nitrogen specific | low | > 40 |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS09615 | | DNA-binding response regulator | 0.37 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS03965 | | DNA-binding response regulator | 0.37 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | — | — |
| Marinobacter adhaerens HP15 | 0.45 | HP15_3981 | | two component transcriptional regulator, Fis family | 0.56 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS23750 | | DNA-binding response regulator | 0.36 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | low | > 81 |
| Rhizobium sp. OAE497 | 0.45 | ABIE40_RS19505 | | ActR/PrrA/RegA family redox response regulator transcription factor | 0.24 | ABIE40_RS09085 | | nitrogen regulation protein NR(II) | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.45 | SMc02584 | | transcriptional regulator | 0.23 | SMc01042 | | nitrogen regulation protein | — | — |
| Agrobacterium fabrum C58 | 0.44 | Atu0050 | | two component response regulator | 0.25 | Atu1445 | | two component sensor kinase | low | > 89 |
| Shewanella amazonensis SB2B | 0.43 | Sama_3186 | | response regulator receiver protein (RefSeq) | 0.40 | Sama_3426 | | nitrogen regulation protein (RefSeq) | low | > 62 |
| Phaeobacter inhibens DSM 17395 | 0.43 | PGA1_c35390 | | photosynthetic apparatus regulatory protein RegA | 0.21 | PGA1_c14780 | | nitrogen regulation protein NtrB | — | — |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_002960 | | ActR/PrrA/RegA family redox response regulator transcription factor | 0.25 | TX73_013415 | | nitrogen regulation protein NR(II) | low | > 86 |
| Bosea sp. OAE506 | 0.42 | ABIE41_RS21050 | | response regulator transcription factor | 0.22 | ABIE41_RS16790 | | ATP-binding protein | low | > 77 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_3147 | | Dna binding response regulator PrrA (RegA) | 0.35 | Ac3H11_4431 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | — | — |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_3707 | | response regulator receiver protein (RefSeq) | 0.39 | Shewana3_0259 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 73 |
| Variovorax sp. OAS795 | 0.41 | ABID97_RS07610 | | response regulator transcription factor | 0.34 | ABID97_RS09940 | | nitrogen regulation protein NR(II) | low | > 91 |
| Variovorax sp. SCN45 | 0.41 | GFF5672 | | Dna binding response regulator PrrA (RegA) | 0.34 | GFF3067 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.69 | 113 |
| Shewanella oneidensis MR-1 | 0.41 | SO4172 | | DNA-binding response regulator (NCBI ptt file) | 0.39 | SO4471 | ntrB | nitrogen regulation protein (NCBI ptt file) | low | > 76 |
| Sphingomonas koreensis DSMZ 15582 | 0.40 | Ga0059261_1560 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.20 | Ga0059261_0139 | | Signal transduction histidine kinase, nitrogen specific | low | > 68 |
| Lysobacter sp. OAE881 | 0.40 | ABIE51_RS09795 | | response regulator transcription factor | 0.27 | ABIE51_RS01365 | | ATP-binding protein | — | — |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS23150 | | chemotaxis protein CheY | 0.20 | AZOBR_RS14425 | | ATPase | low | > 97 |
| Shewanella loihica PV-4 | 0.40 | Shew_3342 | | two component Fis family transcriptional regulator (RefSeq) | 0.39 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 60 |
Not shown: 5 genomes with orthologs for Psest_3338 only; 32 genomes with orthologs for Psest_3931 only