Conservation of cofitness between Psest_3794 and Psest_3711 in Pseudomonas stutzeri RCH2

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3794 Transcriptional regulators 1.0 Psest_3711 Glutamate synthase domain 2 0.26 16
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_0234 transcriptional regulator, AsnC family 0.87 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_0234 transcriptional regulator, AsnC family 0.87 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_09160 AsnC family transcriptional regulator 0.86 AO353_12515 glutamate synthase low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_2143 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.85 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.25 77
Pseudomonas sp. RS175 0.92 PFR28_04400 Leucine-responsive regulatory protein 0.87 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Pseudomonas putida KT2440 0.92 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.86 PP_5076 L-glutamate synthase(NADPH) alpha subunit 0.12 66
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_811 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.86 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens SBW25 0.92 PFLU_RS29385 AsnC family transcriptional regulator 0.86 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_12615 AsnC family transcriptional regulator 0.87 AO356_09375 glutamate synthase low > 104
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS29385 AsnC family transcriptional regulator 0.86 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas simiae WCS417 0.92 PS417_27710 AsnC family transcriptional regulator 0.86 PS417_02000 glutamate synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_4390 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.87 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Pseudomonas sp. S08-1 0.91 OH686_13680 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.87 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Xanthomonas campestris pv. campestris strain 8004 0.81 Xcc-8004.4622.1 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.57 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 74
Rhodanobacter denitrificans FW104-10B01 0.77 LRK54_RS00595 winged helix-turn-helix transcriptional regulator 0.55 LRK54_RS10960 glutamate synthase large subunit low > 59
Rhodanobacter denitrificans MT42 0.77 LRK55_RS00365 winged helix-turn-helix transcriptional regulator 0.55 LRK55_RS10665 glutamate synthase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.77 OKGIIK_06660 lrp AsnC family transcriptional regulator 0.38 OKGIIK_15200 Glutamate synthase subunit alpha low > 52
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS14785 AsnC family transcriptional regulator 0.38 BPHYT_RS17855 glutamate synthase 0.23 33
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS08380 AsnC family transcriptional regulator 0.39 HSERO_RS19595 glutamate synthase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_04288 transcriptional regulator, AsnC family 0.39 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Ralstonia solanacearum PSI07 0.69 RPSI07_RS19595 AsnC family transcriptional regulator 0.39 RPSI07_RS10320 glutamate synthase subunit alpha low > 81
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS09565 Lrp/AsnC ligand binding domain-containing protein 0.38 ABZR87_RS02570 glutamate synthase-related protein low > 80
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS04195 Lrp/AsnC ligand binding domain-containing protein 0.38 QEN71_RS28010 glutamate synthase-related protein low > 153
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS04590 AsnC family transcriptional regulator 0.39 RR42_RS18990 glutamate synthase 0.30 45
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS13875 AsnC family transcriptional regulator 0.39 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Ralstonia solanacearum UW163 0.67 UW163_RS15935 AsnC family transcriptional regulator 0.39 UW163_RS06700 glutamate synthase subunit alpha
Ralstonia solanacearum GMI1000 0.65 RS_RS04610 AsnC family transcriptional regulator 0.38 RS_RS14860 glutamate synthase subunit alpha 0.29 52
Castellaniella sp019104865 MT123 0.63 ABCV34_RS10805 winged helix-turn-helix transcriptional regulator 0.38 ABCV34_RS11150 glutamate synthase-related protein low > 48
Variovorax sp. OAS795 0.60 ABID97_RS22380 winged helix-turn-helix transcriptional regulator 0.39 ABID97_RS23225 glutamate synthase-related protein low > 91
Variovorax sp. SCN45 0.60 GFF1774 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.39 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.85 46
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_09530 leucine-responsive transcriptional regulator Lrp 0.62 CSW01_12030 glutamate synthase large subunit
Erwinia tracheiphila SCR3 0.58 LU632_RS09740 lrp leucine-responsive transcriptional regulator Lrp 0.60 LU632_RS21315 gltB glutamate synthase large subunit 0.95 2
Dickeya dianthicola ME23 0.58 DZA65_RS09915 leucine-responsive transcriptional regulator Lrp 0.60 DZA65_RS01635 glutamate synthase large subunit 0.78 5
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2043 transcriptional regulator, AsnC family 0.60 EX28DRAFT_3275 Glutamate synthase domain 2 0.70 25
Escherichia coli ECRC62 0.58 BNILDI_20400 lrp leucine-responsive transcriptional regulator Lrp 0.60 BNILDI_01850 gltB glutamate synthase large subunit
Escherichia coli ECRC99 0.58 KEDOAH_22160 lrp leucine-responsive transcriptional regulator Lrp 0.60 KEDOAH_10265 gltB glutamate synthase large subunit
Enterobacter sp. TBS_079 0.58 MPMX20_01551 Leucine-responsive regulatory protein 0.60 MPMX20_04126 Glutamate synthase [NADPH] large chain 0.73 1
Escherichia coli ECOR38 0.58 HEPCGN_22935 lrp leucine-responsive transcriptional regulator Lrp 0.60 HEPCGN_16760 gltB3 Glutamate synthase domain 3 low > 85
Dickeya dadantii 3937 0.58 DDA3937_RS09590 leucine-responsive transcriptional regulator Lrp 0.60 DDA3937_RS01665 glutamate synthase large subunit 0.77 23
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF4893 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.60 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_02779 Leucine-responsive regulatory protein 0.60 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 73
Pectobacterium carotovorum WPP14 0.58 HER17_RS12360 leucine-responsive transcriptional regulator Lrp 0.60 HER17_RS19910 glutamate synthase large subunit low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS09605 leucine-responsive transcriptional regulator Lrp 0.60 HGI48_RS01560 glutamate synthase large subunit low > 71
Klebsiella michiganensis M5al 0.58 BWI76_RS09655 leucine-responsive regulatory protein 0.60 BWI76_RS25315 glutamate synthase large subunit 0.56 6
Escherichia coli ECRC101 0.58 MCAODC_24965 lrp leucine-responsive transcriptional regulator Lrp 0.60 MCAODC_08405 gltB glutamate synthase large subunit
Escherichia coli ECRC101 0.58 OKFHMN_05575 lrp leucine-responsive transcriptional regulator Lrp 0.60 OKFHMN_17885 gltB glutamate synthase large subunit
Escherichia coli BL21 0.58 ECD_00893 leucine-responsive global transcriptional regulator 0.60 ECD_03077 glutamate synthase, large subunit low > 60
Escherichia coli Nissle 1917 0.58 ECOLIN_RS04730 leucine-responsive transcriptional regulator Lrp 0.60 ECOLIN_RS18475 glutamate synthase large subunit low > 52
Escherichia coli ECOR27 0.58 NOLOHH_22145 lrp leucine-responsive transcriptional regulator Lrp 0.60 NOLOHH_09685 gltB glutamate synthase large subunit low > 57
Escherichia coli ECRC98 0.58 JDDGAC_09385 lrp leucine-responsive transcriptional regulator Lrp 0.60 JDDGAC_21510 gltB glutamate synthase large subunit
Escherichia coli BW25113 0.58 b0889 lrp DNA-binding transcriptional dual regulator, leucine-binding (NCBI) 0.60 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.58 EFB2_03172 Leucine-responsive regulatory protein 0.60 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli ECRC102 0.58 NIAGMN_03295 lrp leucine-responsive transcriptional regulator Lrp 0.60 NIAGMN_15645 gltB glutamate synthase large subunit
Serratia liquefaciens MT49 0.58 IAI46_08555 leucine-responsive transcriptional regulator Lrp 0.61 IAI46_22345 glutamate synthase large subunit 0.45 28
Rahnella sp. WP5 0.58 EX31_RS18530 leucine-responsive transcriptional regulator Lrp 0.60 EX31_RS12515 glutamate synthase large subunit 0.93 34
Shewanella loihica PV-4 0.57 Shew_2025 leucine-responsive transcriptional regulator (RefSeq) 0.58 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) low > 60
Shewanella amazonensis SB2B 0.56 Sama_1771 leucine-responsive transcriptional regulator (RefSeq) 0.59 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) low > 62
Shewanella sp. ANA-3 0.55 Shewana3_2049 leucine-responsive transcriptional regulator (RefSeq) 0.58 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO2305 lrp leucine-responsive regulatory protein (NCBI ptt file) 0.58 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.54 MIT1002_02181 Leucine-responsive regulatory protein 0.60 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor low > 70
Sinorhizobium meliloti 1021 0.51 SMc00681 leucine-responsive regulatory protein 0.40 SMc04028 glutamate synthase low > 103
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00847 leucine-responsive regulatory protein 0.37 CCNA_03722 glutamate synthase (NADPH) large chain GltB low > 67
Caulobacter crescentus NA1000 0.50 CCNA_00847 leucine-responsive regulatory protein 0.37 CCNA_03722 glutamate synthase (NADPH) large chain GltB low > 66
Bosea sp. OAE506 0.50 ABIE41_RS07920 Lrp/AsnC ligand binding domain-containing protein 0.41 ABIE41_RS08565 glutamate synthase large subunit low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS13055 Lrp/AsnC ligand binding domain-containing protein 0.36 A4249_RS16105 glutamate synthase large subunit low > 48
Acidovorax sp. GW101-3H11 0.49 Ac3H11_2849 PutR, transcriptional activator of PutA and PutP 0.39 Ac3H11_4710 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2725 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.39 GFF1327 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 90
Azospirillum sp. SherDot2 0.47 MPMX19_03947 Leucine-responsive regulatory protein 0.40 MPMX19_02657 Glutamate synthase [NADPH] large chain 0.53 88
Acinetobacter radioresistens SK82 0.45 MPMX26_01467 Leucine-responsive regulatory protein 0.69 MPMX26_02808 Glutamate synthase [NADPH] large chain low > 36
Marinobacter adhaerens HP15 0.42 HP15_2690 transcriptional regulator, AsnC family 0.74 HP15_482 glutamate synthase subunit alpha
Rhizobium sp. OAE497 0.40 ABIE40_RS23450 Lrp/AsnC family transcriptional regulator 0.40 ABIE40_RS16275 glutamate synthase large subunit
Agrobacterium fabrum C58 0.40 Atu4159 AsnC family transcriptional regulator 0.40 Atu3784 glutamate synthase large subunit low > 89
Phaeobacter inhibens DSM 17395 0.36 PGA1_c11760 putative proline dehydrogenase transcriptional activator 0.40 PGA1_c36100 glutamate synthase [NADPH] large chain low > 62
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS01345 Lrp/AsnC ligand binding domain-containing protein 0.42 HMPREF1181_RS16055 glutamate synthase large subunit low > 56

Not shown: 5 genomes with orthologs for Psest_3794 only; 18 genomes with orthologs for Psest_3711 only