Conservation of cofitness between PGA1_c11960 and PGA1_262p00390 in Phaeobacter inhibens DSM 17395

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c11960 uracil phosphoribosyltransferase Upp 1.0 PGA1_262p00390 aldose 1-epimerase 0.29 7
Dinoroseobacter shibae DFL-12 0.83 Dshi_0831 uracil phosphoribosyltransferase (RefSeq) 0.21 Dshi_2683 Aldose 1-epimerase (RefSeq) low > 64
Agrobacterium fabrum C58 0.73 Atu0135 uracil phosphoribosyltransferase 0.23 Atu2719 aldose epimerase low > 89
Rhizobium sp. OAE497 0.72 ABIE40_RS00825 uracil phosphoribosyltransferase 0.24 ABIE40_RS18585 aldose epimerase family protein low > 107
Sinorhizobium meliloti 1021 0.71 SMc04121 uracil phosphoribosyltransferase 0.25 SMc03798 aldose 1-epimerase low > 103
Acidovorax sp. GW101-3H11 0.67 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.17 Ac3H11_3951 Aldose 1-epimerase (EC 5.1.3.3) low > 79
Variovorax sp. OAS795 0.64 ABID97_RS16850 uracil phosphoribosyltransferase 0.26 ABID97_RS06780 aldose epimerase family protein low > 91
Variovorax sp. SCN45 0.64 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.23 GFF5187 Aldose 1-epimerase (EC 5.1.3.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.17 GFF791 Aldose 1-epimerase (EC 5.1.3.3) low > 90
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02351 uracil phosphoribosyltransferase 0.22 CCNA_01485 aldose 1-epimerase low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02351 uracil phosphoribosyltransferase 0.22 CCNA_01485 aldose 1-epimerase low > 66
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS03500 uracil phosphoribosyltransferase 0.20 HSERO_RS22450 aldose 1-epimerase low > 78
Azospirillum sp. SherDot2 0.59 MPMX19_02205 Uracil phosphoribosyltransferase 0.24 MPMX19_06214 Aldose 1-epimerase low > 112
Azospirillum brasilense Sp245 0.59 AZOBR_RS03150 uracil phosphoribosyltransferase 0.19 AZOBR_RS31270 aldose 1-epimerase low > 97
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS24390 uracil phosphoribosyltransferase 0.20 QEN71_RS25885 aldose epimerase family protein low > 153
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS15395 uracil phosphoribosyltransferase 0.23 ABZR87_RS18210 aldose epimerase family protein low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_001547 uracil phosphoribosyltransferase 0.22 ABIE53_006020 aldose 1-epimerase low > 113
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS06415 uracil phosphoribosyltransferase 0.19 BPHYT_RS32835 aldose 1-epimerase — —
Fusobacterium nucleatum SB010 0.56 HUW76_07615 uracil phosphoribosyltransferase 0.19 HUW76_01285 galactose mutarotase low > 35
Serratia liquefaciens MT49 0.54 IAI46_18880 uracil phosphoribosyltransferase 0.20 IAI46_06420 galactose-1-epimerase low > 86
Pectobacterium carotovorum WPP14 0.53 HER17_RS15460 uracil phosphoribosyltransferase 0.19 HER17_RS14770 galactose-1-epimerase low > 75
Erwinia tracheiphila SCR3 0.53 LU632_RS08280 upp uracil phosphoribosyltransferase 0.23 LU632_RS15915 galM galactose-1-epimerase low > 74
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_11345 uracil phosphoribosyltransferase 0.21 CSW01_07995 galactose-1-epimerase low > 62
Shewanella sp. ANA-3 0.52 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) 0.24 Shewana3_2072 L-arabinose 1-epimerase (mutarotase) (EC 5.1.3.3) (from data) low > 73
Dickeya dianthicola ME23 0.52 DZA65_RS06425 uracil phosphoribosyltransferase 0.19 DZA65_RS06975 galactose-1-epimerase low > 75
Dickeya dadantii 3937 0.52 DDA3937_RS06030 uracil phosphoribosyltransferase 0.18 DDA3937_RS06600 galactose-1-epimerase low > 74
Rahnella sp. WP5 0.52 EX31_RS22700 uracil phosphoribosyltransferase 0.19 EX31_RS23565 galactose-1-epimerase low > 89
Pantoea sp. MT58 0.52 IAI47_05185 uracil phosphoribosyltransferase 0.20 IAI47_13595 galactose-1-epimerase low > 76
Escherichia coli ECRC98 0.52 JDDGAC_25760 upp uracil phosphoribosyltransferase 0.19 JDDGAC_10385 galM galactose-1-epimerase — —
Escherichia coli BW25113 0.52 b2498 upp uracil phosphoribosyltransferase (VIMSS) 0.19 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01228 Uracil phosphoribosyltransferase 0.19 OHPLBJKB_02957 Aldose 1-epimerase low > 73
Klebsiella michiganensis M5al 0.52 BWI76_RS20945 uracil phosphoribosyltransferase 0.19 BWI76_RS08610 galactose-1-epimerase low > 92
Escherichia coli ECRC99 0.52 KEDOAH_06405 upp uracil phosphoribosyltransferase 0.19 KEDOAH_21235 galM galactose-1-epimerase — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) 0.20 EX28DRAFT_2239 galactose mutarotase low > 76
Escherichia fergusonii Becca 0.52 EFB2_01400 Uracil phosphoribosyltransferase 0.19 EFB2_03350 Aldose 1-epimerase low > 86
Escherichia coli Nissle 1917 0.52 ECOLIN_RS14185 uracil phosphoribosyltransferase 0.19 ECOLIN_RS04025 galactose-1-epimerase low > 52
Escherichia coli ECRC101 0.52 MCAODC_12345 upp uracil phosphoribosyltransferase 0.19 MCAODC_25950 galM galactose-1-epimerase — —
Escherichia coli ECOR38 0.52 HEPCGN_20980 upp uracil phosphoribosyltransferase 0.19 HEPCGN_01545 galM galactose-1-epimerase low > 85
Dickeya dianthicola 67-19 0.52 HGI48_RS06075 uracil phosphoribosyltransferase 0.18 HGI48_RS06620 galactose-1-epimerase low > 71
Escherichia coli ECRC101 0.52 OKFHMN_21815 upp uracil phosphoribosyltransferase 0.19 OKFHMN_06730 galM galactose-1-epimerase — —
Shewanella oneidensis MR-1 0.52 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) 0.23 SO0693 galM aldose 1-epimerase (NCBI ptt file) low > 76
Escherichia coli ECRC102 0.52 NIAGMN_19585 upp uracil phosphoribosyltransferase 0.19 NIAGMN_04780 galM galactose-1-epimerase — —
Escherichia coli ECOR27 0.52 NOLOHH_13465 upp uracil phosphoribosyltransferase 0.19 NOLOHH_23160 galM galactose-1-epimerase low > 57
Escherichia coli ECRC62 0.52 BNILDI_12275 upp uracil phosphoribosyltransferase 0.19 BNILDI_21155 galM galactose-1-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.19 GFF649 Aldose 1-epimerase (EC 5.1.3.3) low > 78
Enterobacter sp. TBS_079 0.51 MPMX20_03352 Uracil phosphoribosyltransferase 0.21 MPMX20_01383 Aldose 1-epimerase low > 85
Shewanella loihica PV-4 0.51 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.24 Shew_3272 Aldose 1-epimerase (EC 5.1.3.3) (from data) low > 60
Shewanella amazonensis SB2B 0.51 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) 0.23 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) low > 62
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS04485 uracil phosphoribosyltransferase 0.23 PFLU_RS11665 galactose mutarotase low > 109
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.23 Pf6N2E2_2135 Aldose 1-epimerase (EC 5.1.3.3) low > 103
Alteromonas macleodii MIT1002 0.51 MIT1002_02893 Uracil phosphoribosyltransferase 0.23 MIT1002_00187 Aldose 1-epimerase precursor low > 70
Pseudomonas fluorescens SBW25 0.51 PFLU_RS04485 uracil phosphoribosyltransferase 0.23 PFLU_RS11665 galactose mutarotase low > 109
Pseudomonas sp. RS175 0.51 PFR28_03641 Uracil phosphoribosyltransferase 0.24 PFR28_01305 Aldose 1-epimerase low > 88
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_16565 uracil phosphoribosyltransferase 0.23 AO356_01315 aldose epimerase low > 104
Pseudomonas simiae WCS417 0.50 PS417_04435 uracil phosphoribosyltransferase 0.23 PS417_11040 aldose epimerase low > 88
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.24 Pf1N1B4_84 Aldose 1-epimerase (EC 5.1.3.3) low > 87
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS09615 uracil phosphoribosyltransferase 0.25 ABZR86_RS01235 aldose epimerase family protein low > 74
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0969 uracil phosphoribosyltransferase 0.23 Psyr_2369 aldose 1-epimerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0969 uracil phosphoribosyltransferase 0.23 Psyr_2369 aldose 1-epimerase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2160.1 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.30 Xcc-8004.3776.1 Aldose 1-epimerase (EC 5.1.3.3) low > 74
Lysobacter sp. OAE881 0.48 ABIE51_RS15050 uracil phosphoribosyltransferase 0.25 ABIE51_RS10905 aldose epimerase family protein low > 62
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_10040 upp uracil phosphoribosyltransferase 0.25 OKGIIK_12490 Aldose 1-epimerase low > 52
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_14760 uracil phosphoribosyltransferase 0.27 CA264_09120 galactose-1-epimerase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_0597 Uracil phosphoribosyltransferase 0.26 Echvi_0502 Galactose mutarotase and related enzymes low > 79
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS06680 uracil phosphoribosyltransferase 0.21 ABI39_RS11660 galactose mutarotase low > 72
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS10070 uracil phosphoribosyltransferase 0.22 HMPREF1058_RS15670 galactose mutarotase low > 67
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS00655 uracil phosphoribosyltransferase 0.25 HMPREF1078_RS08705 aldose epimerase family protein low > 61
Bacteroides ovatus ATCC 8483 0.23 BACOVA_02012 putative uracil phosphoribosyltransferase 0.22 BACOVA_03348 aldose 1-epimerase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.22 BT2791 uracil phosphoribosyltransferase (NCBI ptt file) 0.22 BT3532 aldose 1-epimerase precursor (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.22 HMPREF1181_RS01165 uracil phosphoribosyltransferase 0.21 HMPREF1181_RS04435 galactose mutarotase low > 56
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS19460 uracil phosphoribosyltransferase 0.25 CA265_RS08330 galactose-1-epimerase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS00770 uracil phosphoribosyltransferase 0.24 ABZR88_RS16165 aldose epimerase family protein low > 71

Not shown: 27 genomes with orthologs for PGA1_c11960 only; 0 genomes with orthologs for PGA1_262p00390 only