| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_2442 | | RNA polymerase, sigma 54 subunit, RpoN | 1.0 | HP15_3277 | | diadenosine tetraphosphatase | 0.49 | 6 |
| Pseudomonas putida KT2440 | 0.63 | PP_0952 | | RNA polymerase sigma-54 factor | 0.53 | PP_0399 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_07035 | | RNA polymerase sigma-54 factor | 0.54 | AO356_14325 | | diadenosine tetraphosphatase | — | — |
| Pseudomonas sp. RS175 | 0.62 | PFR28_00173 | | RNA polymerase sigma-54 factor | 0.54 | PFR28_04066 | | 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 | — | — |
| Pseudomonas sp. S08-1 | 0.62 | OH686_08540 | | RNA polymerase sigma-54 factor | 0.55 | OH686_15030 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_5014 | | RNA polymerase sigma-54 factor RpoN | 0.55 | PfGW456L13_1198 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | 0.55 | PFLU_RS27475 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | — | — |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS04400 | | RNA polymerase factor sigma-54 | 0.55 | PFLU_RS27475 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_05180 | | RNA polymerase sigma-54 factor | 0.54 | AO353_07325 | | diadenosine tetraphosphatase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_3267 | | RNA polymerase sigma-54 factor RpoN | 0.55 | Pf6N2E2_4803 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.52 | Psyr_4629 | | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_4147 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.52 | Psyr_4629 | | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | — | — |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_3313 | | RNA polymerase sigma-54 factor | 0.56 | Psest_3670 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.61 | Pf1N1B4_1080 | | RNA polymerase sigma-54 factor RpoN | 0.54 | Pf1N1B4_2526 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) | — | — |
| Pseudomonas simiae WCS417 | 0.61 | PS417_04345 | | RNA polymerase factor sigma-54 | 0.55 | PS417_25820 | | diadenosine tetraphosphatase | — | — |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_00827 | | RNA polymerase sigma-54 factor 2 | 0.41 | MIT1002_00779 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_12815 | | RNA polymerase sigma-54 factor | 0.45 | CSW01_02315 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | low | > 62 |
| Escherichia coli BW25113 | 0.55 | b3202 | rpoN | DNA-directed RNA polymerase subunit N (NCBI) | 0.48 | b0049 | apaH | diadenosinetetraphosphatase (NCBI) | — | — |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01795 | rpoN | RNA polymerase factor sigma-54 | 0.48 | BNILDI_08415 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS18425 | | RNA polymerase factor sigma-54 | 0.48 | ECOLIN_RS00275 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia coli ECRC101 | 0.55 | MCAODC_08460 | rpoN | RNA polymerase factor sigma-54 | 0.48 | MCAODC_01360 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia fergusonii Becca | 0.55 | EFB2_00621 | | RNA polymerase sigma-54 factor | 0.48 | EFB2_03994 | | Bis(5'-nucleosyl)-tetraphosphatase [symmetrical] | — | — |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_16815 | rpoN | RNA polymerase factor sigma-54 | 0.48 | HEPCGN_08835 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia coli BL21 | 0.55 | ECD_03067 | | RNA polymerase, sigma 54 (sigma N) factor | 0.48 | ECD_00053 | | diadenosine tetraphosphatase | low | > 60 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00498 | | RNA polymerase sigma-54 factor | 0.48 | OHPLBJKB_03607 | | 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 | — | — |
| Escherichia coli ECRC101 | 0.55 | OKFHMN_17940 | rpoN | RNA polymerase factor sigma-54 | 0.48 | OKFHMN_10845 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_21565 | rpoN | RNA polymerase factor sigma-54 | 0.48 | JDDGAC_14440 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_10210 | rpoN | RNA polymerase factor sigma-54 | 0.47 | KEDOAH_17310 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_15700 | rpoN | RNA polymerase factor sigma-54 | 0.48 | NIAGMN_08695 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09740 | rpoN | RNA polymerase factor sigma-54 | 0.48 | NOLOHH_03190 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3256 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.49 | EX28DRAFT_3643 | | Bis(5'nucleosyl)-tetraphosphatase, ApaH | — | — |
| Shewanella amazonensis SB2B | 0.54 | Sama_3088 | | RNA polymerase factor sigma-54 (RefSeq) | 0.42 | Sama_2821 | apaH | diadenosine tetraphosphatase (RefSeq) | low | > 62 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS01445 | | RNA polymerase factor sigma-54 | 0.44 | HGI48_RS18210 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | low | > 71 |
| Pantoea sp. MT58 | 0.54 | IAI47_17185 | | RNA polymerase factor sigma-54 | 0.48 | IAI47_16095 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | low | > 76 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_0672 | | RNA polymerase factor sigma-54 (RefSeq) | 0.40 | Shewana3_3211 | apaH | diadenosine tetraphosphatase (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.54 | IAI46_22470 | | RNA polymerase factor sigma-54 | 0.46 | IAI46_03235 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Shewanella oneidensis MR-1 | 0.54 | SO3961 | rpoN | RNA polymerase sigma-54 factor (NCBI ptt file) | 0.41 | SO3641 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) (NCBI ptt file) | 0.47 | 69 |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS01510 | | RNA polymerase factor sigma-54 | 0.44 | DZA65_RS19350 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | low | > 75 |
| Shewanella loihica PV-4 | 0.54 | Shew_3311 | | RNA polymerase factor sigma-54 (RefSeq) | 0.39 | Shew_0877 | apaH | diadenosine tetraphosphatase (RefSeq) | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.54 | GFF2946 | | RNA polymerase sigma-54 factor RpoN | 0.46 | GFF192 | | 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41)' transl_table=11 | 0.75 | 61 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12400 | | RNA polymerase factor sigma-54 | 0.44 | EX31_RS03790 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | low | > 89 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS01530 | | RNA polymerase factor sigma-54 | 0.45 | DDA3937_RS18275 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | low | > 74 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_04108 | | RNA polymerase sigma-54 factor | 0.48 | MPMX20_00745 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical | — | — |
| Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS20060 | | RNA polymerase factor sigma-54 | 0.44 | HER17_RS02950 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | low | > 75 |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS25265 | | RNA polymerase factor sigma-54 | 0.46 | BWI76_RS04510 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | — | — |
| Erwinia tracheiphila SCR3 | 0.52 | LU632_RS21280 | rpoN | RNA polymerase factor sigma-54 | 0.45 | LU632_RS02740 | apaH | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | — | — |
| Dechlorosoma suillum PS | 0.43 | Dsui_0704 | | RNA polymerase sigma-54 factor | 0.44 | Dsui_0399 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS19815 | | RNA polymerase factor sigma-54 | 0.39 | ABZR86_RS11280 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS07060 | | RNA polymerase factor sigma-54 | 0.38 | ABZR87_RS08640 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.40 | RR42_RS02085 | | RNA polymerase subunit sigma-54 | 0.40 | RR42_RS15845 | | biotin transporter BioY | low | > 128 |
| Rhodanobacter denitrificans FW104-10B01 | 0.40 | LRK54_RS12875 | | RNA polymerase factor sigma-54 | 0.40 | LRK54_RS12295 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS12575 | | RNA polymerase factor sigma-54 | 0.40 | LRK55_RS12030 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 63 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02592 | | RNA polymerase sigma-54 factor | 0.43 | MPMX26_00597 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical | low | > 36 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_01927 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.38 | H281DRAFT_04820 | | Bis(5'nucleosyl)-tetraphosphatase, ApaH | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS02020 | | RNA polymerase sigma-54 factor | 0.37 | RS_RS03425 | | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | — | — |
| Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS22130 | | RNA polymerase factor sigma-54 | 0.36 | RPSI07_RS20620 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | — | — |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS02905 | | RNA polymerase subunit sigma-54 | 0.39 | BPHYT_RS04255 | | diadenosine tetraphosphatase | low | > 109 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS02410 | | RNA polymerase sigma-54 factor | 0.36 | UW163_RS00925 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS11170 | | RNA polymerase sigma-54 factor | 0.36 | RALBFv3_RS12640 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS19855 | | RNA polymerase subunit sigma-54 | 0.43 | HSERO_RS02350 | | diadenosine tetraphosphatase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.39 | QEN71_RS01755 | | RNA polymerase factor sigma-54 | 0.40 | QEN71_RS25765 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 153 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_02265 | | RNA polymerase factor sigma-54 | 0.39 | OKGIIK_11635 | apaH | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.37 | Xcc-8004.1662.1 | | RNA polymerase sigma-54 factor RpoN | 0.37 | Xcc-8004.4275.1 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) | low | > 74 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_727 | | RNA polymerase sigma-54 factor RpoN | 0.39 | Ac3H11_1136 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) | low | > 79 |
| Kangiella aquimarina DSM 16071 | 0.34 | B158DRAFT_2080 | | RNA polymerase, sigma 54 subunit, RpoN/SigL | 0.45 | B158DRAFT_0583 | | Bis(5'nucleosyl)-tetraphosphatase, ApaH | low | > 40 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS04780 | | RNA polymerase factor sigma-54 | 0.43 | ABID97_RS21950 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.34 | GFF3068 | | RNA polymerase sigma-54 factor RpoN | 0.41 | GFF223 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) | low | > 90 |
| Variovorax sp. SCN45 | 0.33 | GFF6290 | | RNA polymerase sigma-54 factor RpoN | 0.44 | GFF1936 | | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.27 | ABCV34_RS12430 | | RNA polymerase factor sigma-54 | 0.38 | ABCV34_RS10715 | | symmetrical bis(5'-nucleosyl)-tetraphosphatase | low | > 48 |
Not shown: 27 genomes with orthologs for HP15_2442 only; 0 genomes with orthologs for HP15_3277 only