| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3338 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 1.0 | Psest_3317 | | Phosphotransferase System HPr (HPr) Family | 0.27 | 19 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_5048 | | Dna binding response regulator PrrA (RegA) | 0.77 | PfGW456L13_5018 | | Phosphocarrier protein, nitrogen regulation associated | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.80 | Psyr_4151 | | Phosphocarrier HPr protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.80 | Psyr_4151 | | Phosphocarrier HPr protein | low | > 86 |
| Pseudomonas sp. RS175 | 0.86 | PFR28_00137 | | Photosynthetic apparatus regulatory protein RegA | 0.71 | PFR28_00169 | | Phosphocarrier protein NPr | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS04140 | | response regulator transcription factor | 0.77 | PFLU_RS04380 | | HPr family phosphocarrier protein | — | — |
| Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS04140 | | response regulator transcription factor | 0.77 | PFLU_RS04380 | | HPr family phosphocarrier protein | — | — |
| Pseudomonas simiae WCS417 | 0.86 | PS417_04100 | | chemotaxis protein CheY | 0.77 | PS417_04325 | | phosphocarrier protein HPr | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.86 | Pf1N1B4_1115 | | Dna binding response regulator PrrA (RegA) | 0.77 | Pf1N1B4_1084 | | Phosphocarrier protein, nitrogen regulation associated | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.86 | AO353_05335 | | chemotaxis protein CheY | 0.77 | AO353_05200 | | phosphocarrier protein HPr | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.85 | AO356_07205 | | chemotaxis protein CheY | 0.69 | AO356_07055 | | phosphocarrier protein HPr | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.85 | Pf6N2E2_3302 | | Dna binding response regulator PrrA (RegA) | 0.69 | Pf6N2E2_3271 | | Phosphocarrier protein, nitrogen regulation associated | — | — |
| Pseudomonas sp. S08-1 | 0.84 | OH686_08680 | | Dna binding response regulator PrrA (RegA) | 0.75 | OH686_08565 | | Phosphocarrier protein, nitrogen regulation associated | low | > 80 |
| Pseudomonas putida KT2440 | 0.84 | PP_0888 | | Photosynthetic apparatus regulatory protein RegA | 0.83 | PP_0948 | | Phosphocarrier protein HPr | low | > 96 |
| Dechlorosoma suillum PS | 0.59 | Dsui_1180 | | response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein | 0.43 | Dsui_0743 | | phosphotransferase system HPr (HPr) family protein | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS10115 | | response regulator transcription factor | 0.38 | ABZR86_RS19790 | | HPr family phosphocarrier protein | — | — |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_10900 | | two-component system response regulator | 0.35 | OKGIIK_02240 | | Phosphocarrier protein HPr | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS04040 | | response regulator transcription factor | 0.38 | LRK54_RS12850 | | HPr family phosphocarrier protein | — | — |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS03810 | | response regulator transcription factor | 0.38 | LRK55_RS12550 | | HPr family phosphocarrier protein | low | > 63 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.50 | H281DRAFT_02208 | | two component transcriptional regulator, Fis family | 0.45 | H281DRAFT_02008 | | phosphocarrier protein | — | — |
| Burkholderia phytofirmans PsJN | 0.50 | BPHYT_RS01625 | | chemotaxis protein CheY | 0.45 | BPHYT_RS02570 | | phosphocarrier protein HPr | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.50 | ABIE53_000420 | | two-component system response regulator RegA | 0.45 | ABIE53_000659 | | phosphocarrier protein HPr | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS00325 | | response regulator transcription factor | 0.45 | QEN71_RS01425 | | HPr family phosphocarrier protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS13000 | | chemotaxis protein CheY | 0.42 | HSERO_RS00445 | | phosphocarrier protein HPr | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS01085 | | chemotaxis protein CheY | 0.47 | RR42_RS01790 | | phosphocarrier protein HPr | — | — |
| Dinoroseobacter shibae DFL-12 | 0.47 | Dshi_3430 | | two component transcriptional regulator, Fis family (RefSeq) | 0.33 | Dshi_0207 | | Phosphotransferase system, phosphocarrier protein HPr (RefSeq) | — | — |
| Caulobacter crescentus NA1000 | 0.46 | CCNA_01845 | | two-component response regulator protein | 0.40 | CCNA_00241 | | phosphocarrier protein HPr | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.46 | CCNA_01845 | | two-component response regulator protein | 0.40 | CCNA_00241 | | phosphocarrier protein HPr | — | — |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS05135 | | response regulator transcription factor | 0.51 | ABZR87_RS06720 | | HPr family phosphocarrier protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS00200 | | DNA-binding response regulator | 0.49 | RS_RS01710 | | HPr family phosphocarrier protein | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS03965 | | DNA-binding response regulator | 0.50 | UW163_RS02710 | | HPr family phosphocarrier protein | — | — |
| Marinobacter adhaerens HP15 | 0.45 | HP15_3981 | | two component transcriptional regulator, Fis family | 0.51 | HP15_2446 | | phosphotransferase system, phosphocarrier protein Hpr | — | — |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS23750 | | DNA-binding response regulator | 0.49 | RPSI07_RS22440 | | HPr family phosphocarrier protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS09615 | | DNA-binding response regulator | 0.50 | RALBFv3_RS10870 | | HPr family phosphocarrier protein | — | — |
| Rhizobium sp. OAE497 | 0.45 | ABIE40_RS19505 | | ActR/PrrA/RegA family redox response regulator transcription factor | 0.41 | ABIE40_RS19390 | | HPr family phosphocarrier protein | — | — |
| Sinorhizobium meliloti 1021 | 0.45 | SMc02584 | | transcriptional regulator | 0.41 | SMc02754 | | phosphocarrier HPr | — | — |
| Agrobacterium fabrum C58 | 0.44 | Atu0050 | | two component response regulator | 0.34 | Atu0030 | | phosphocarrier protein HPr | low | > 89 |
| Shewanella amazonensis SB2B | 0.43 | Sama_3186 | | response regulator receiver protein (RefSeq) | 0.34 | Sama_3092 | | phosphocarrier protein NPR (RefSeq) | low | > 62 |
| Phaeobacter inhibens DSM 17395 | 0.43 | PGA1_c35390 | | photosynthetic apparatus regulatory protein RegA | 0.35 | PGA1_c01200 | | putative phosphocarrier, HPr family | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.3041.1 | | Dna binding response regulator PrrA (RegA) | 0.38 | Xcc-8004.1656.1 | | Phosphocarrier protein, nitrogen regulation associated | — | — |
| Bosea sp. OAE506 | 0.42 | ABIE41_RS21050 | | response regulator transcription factor | 0.40 | ABIE41_RS02695 | | HPr family phosphocarrier protein | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.42 | A4249_RS04475 | | response regulator transcription factor | 0.34 | A4249_RS12145 | | HPr family phosphocarrier protein | — | — |
| Azospirillum sp. SherDot2 | 0.42 | MPMX19_06181 | | Photosynthetic apparatus regulatory protein RegA | 0.42 | MPMX19_02624 | | Phosphocarrier protein NPr | — | — |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_3147 | | Dna binding response regulator PrrA (RegA) | 0.49 | Ac3H11_2116 | | Phosphocarrier protein of PTS system | — | — |
| Variovorax sp. OAS795 | 0.41 | ABID97_RS07610 | | response regulator transcription factor | 0.52 | ABID97_RS00570 | | HPr family phosphocarrier protein | low | > 91 |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_3707 | | response regulator receiver protein (RefSeq) | 0.36 | Shewana3_0668 | | HPr family phosphocarrier protein (RefSeq) | low | > 73 |
| Variovorax sp. SCN45 | 0.41 | GFF5672 | | Dna binding response regulator PrrA (RegA) | 0.52 | GFF3652 | | Phosphotransferase system, phosphocarrier protein HPr | — | — |
| Shewanella oneidensis MR-1 | 0.41 | SO4172 | | DNA-binding response regulator (NCBI ptt file) | 0.36 | SO3965 | ptsO | phosphocarrier protein NPR (NCBI ptt file) | low | > 76 |
| Lysobacter sp. OAE881 | 0.40 | ABIE51_RS09795 | | response regulator transcription factor | 0.36 | ABIE51_RS15995 | | HPr family phosphocarrier protein | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.40 | Ga0059261_1560 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.36 | Ga0059261_0919 | | Phosphotransferase System HPr (HPr) Family | — | — |
| Shewanella loihica PV-4 | 0.40 | Shew_3342 | | two component Fis family transcriptional regulator (RefSeq) | 0.35 | Shew_3315 | | phosphotransferase system, phosphocarrier protein HPr (RefSeq) | — | — |
Not shown: 3 genomes with orthologs for Psest_3338 only; 33 genomes with orthologs for Psest_3317 only