Conservation of cofitness between GFF670 and GFF3185 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 1.0 GFF3185 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) 0.59 12
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.87 OHPLBJKB_00621 2,4-dienoyl-CoA reductase low > 73
Escherichia coli BW25113 0.87 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.87 b3081 fadH 2,4-dienoyl-CoA reductase, NADH and FMN-linked (NCBI) low > 76
Escherichia coli ECOR27 0.87 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.88 NOLOHH_10370 fadH NADPH-dependent 2,4-dienoyl-CoA reductase low > 57
Escherichia coli ECRC62 0.87 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 BNILDI_01145 fadH NADPH-dependent 2,4-dienoyl-CoA reductase
Escherichia coli ECRC101 0.86 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 MCAODC_09090 fadH NADPH-dependent 2,4-dienoyl-CoA reductase
Escherichia coli BL21 0.86 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 0.87 ECD_02950 2,4-dienoyl-CoA reductase, NADH and FMN-linked 0.47 52
Escherichia coli ECRC99 0.86 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 KEDOAH_09570 fadH NADPH-dependent 2,4-dienoyl-CoA reductase
Escherichia coli ECRC101 0.86 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 OKFHMN_18575 fadH NADPH-dependent 2,4-dienoyl-CoA reductase
Escherichia coli ECRC102 0.86 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 NIAGMN_16340 fadH NADPH-dependent 2,4-dienoyl-CoA reductase
Escherichia coli ECOR38 0.86 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 HEPCGN_17420 fadH NADPH-dependent 2,4-dienoyl-CoA reductase 0.53 81
Escherichia fergusonii Becca 0.86 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.87 EFB2_00730 2,4-dienoyl-CoA reductase low > 86
Escherichia coli ECRC98 0.86 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 JDDGAC_22210 fadH NADPH-dependent 2,4-dienoyl-CoA reductase
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 ECOLIN_RS17775 NADPH-dependent 2,4-dienoyl-CoA reductase low > 52
Klebsiella michiganensis M5al 0.85 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.84 BWI76_RS24675 NADPH-dependent 2,4-dienoyl-CoA reductase low > 92
Enterobacter sp. TBS_079 0.85 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.87 MPMX20_03994 2,4-dienoyl-CoA reductase low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.87 EX28DRAFT_3152 NADH:flavin oxidoreductases, Old Yellow Enzyme family low > 76
Serratia liquefaciens MT49 0.75 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.68 IAI46_22180 NADPH-dependent 2,4-dienoyl-CoA reductase low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.69 HER17_RS18675 NADPH-dependent 2,4-dienoyl-CoA reductase low > 75
Rahnella sp. WP5 0.74 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.68 EX31_RS08345 NADPH-dependent 2,4-dienoyl-CoA reductase low > 89
Pantoea sp. MT58 0.72 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.64 IAI47_02955 NADPH-dependent 2,4-dienoyl-CoA reductase low > 76
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.55 CSW01_09945 NADPH-dependent 2,4-dienoyl-CoA reductase low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 MIT1002_02566 2,4-dienoyl-CoA reductase [NADPH] low > 70
Acinetobacter radioresistens SK82 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.63 MPMX26_01687 2,4-dienoyl-CoA reductase low > 36
Shewanella sp. ANA-3 0.57 Shewana3_2520 aminotransferase (RefSeq) 0.57 Shewana3_1965 2,4-dienoyl-CoA reductase (RefSeq)
Shewanella oneidensis MR-1 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.58 SO2419 2,4-dienoyl-CoA reductase, putative (NCBI ptt file)
Shewanella loihica PV-4 0.55 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.58 Shew_1942 NADH:flavin oxidoreductase/NADH oxidase (RefSeq)
Shewanella amazonensis SB2B 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.57 Sama_1724 NADH:flavin oxidoreductase/NADH oxidase (RefSeq)
Phaeobacter inhibens DSM 17395 0.49 PGA1_c09150 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.59 PGA1_c29100 2,4-dienoyl-CoA reductase FadH low > 62
Mycobacterium tuberculosis H37Rv 0.47 Rv1568 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.51 Rv1175c Probable NADPH dependent 2,4-dienoyl-CoA reductase FadH (2,4-dienoyl coenzyme A reductase) (4-enoyl-CoA reductase) low > 58
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 ABZR86_RS05580 NADPH-dependent 2,4-dienoyl-CoA reductase low > 74
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 LRK54_RS18020 NADPH-dependent 2,4-dienoyl-CoA reductase low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 LRK55_RS17875 NADPH-dependent 2,4-dienoyl-CoA reductase low > 63
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.62 Pf1N1B4_3955 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) low > 87
Pseudomonas sp. RS175 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.63 PFR28_01236 2,4-dienoyl-CoA reductase low > 88
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.61 Psyr_1675 2,4-dienoyl-CoA reductase low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 AO353_20220 2,4-dienoyl-CoA reductase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.61 Psyr_1675 2,4-dienoyl-CoA reductase low > 86
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 AO356_01700 2,4-dienoyl-CoA reductase low > 104
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 OKGIIK_07280 fadH NADPH-dependent 2,4-dienoyl-CoA reductase low > 52
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.62 Pf6N2E2_2209 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) low > 103
Pseudomonas sp. S08-1 0.34 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.62 OH686_04325 2,4-dienoyl-CoA reductase [NADPH] low > 80
Pseudomonas putida KT2440 0.33 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 PP_2008 2,4-dienoyl-CoA reductase low > 96
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.63 HP15_1058 2,4-dienoyl-CoA reductase low > 73
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.62 PfGW456L13_2567 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) low > 87
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.61 PFLU_RS19095 NADPH-dependent 2,4-dienoyl-CoA reductase low > 109
Pseudomonas stutzeri RCH2 0.33 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.60 Psest_2554 NADH:flavin oxidoreductases, Old Yellow Enzyme family low > 67
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.61 PFLU_RS19095 NADPH-dependent 2,4-dienoyl-CoA reductase low > 109
Pseudomonas simiae WCS417 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.61 PS417_17165 2,4-dienoyl-CoA reductase low > 88
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.61 B158DRAFT_1579 2,4-dienoyl-CoA reductase (EC 1.3.1.34)
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.55 Xcc-8004.4097.1 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) low > 74
Lysobacter sp. OAE881 0.31 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.54 ABIE51_RS06045 NADPH-dependent 2,4-dienoyl-CoA reductase low > 62
Magnetospirillum magneticum AMB-1 0.31 AMB_RS13895 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.50 AMB_RS17475 NADPH-dependent 2,4-dienoyl-CoA reductase
Paraburkholderia graminis OAS925 0.30 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.51 ABIE53_002850 2,4-dienoyl-CoA reductase (NADPH2) low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.49 GFF977 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) low > 90
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.52 H281DRAFT_00403 2,4-dienoyl-CoA reductase (EC 1.3.1.34) low > 103
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.55 ABZR87_RS19455 NADPH-dependent 2,4-dienoyl-CoA reductase low > 80
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.51 BPHYT_RS13185 2,4-dienoyl-CoA reductase low > 109
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.18 Ga0059261_2854 NADH:flavin oxidoreductases, Old Yellow Enzyme family low > 68
Acidovorax sp. GW101-3H11 0.28 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.66 Ac3H11_340 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) low > 79
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 QEN71_RS05490 NADPH-dependent 2,4-dienoyl-CoA reductase
Dinoroseobacter shibae DFL-12 0.21 Dshi_1446 aminotransferase class-III (RefSeq) 0.55 Dshi_0125 NADH:flavin oxidoreductase/NADH oxidase (RefSeq) low > 64
Azospirillum sp. SherDot2 0.20 MPMX19_02440 Putrescine--pyruvate aminotransferase 0.58 MPMX19_05811 2,4-dienoyl-CoA reductase low > 112

Not shown: 33 genomes with orthologs for GFF670 only; 0 genomes with orthologs for GFF3185 only