Conservation of cofitness between Psest_1295 and Psest_2589 in Pseudomonas stutzeri RCH2

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1295 Aspartate/tyrosine/aromatic aminotransferase 1.0 Psest_2589 3-isopropylmalate dehydrogenase 0.72 12
Pseudomonas sp. S08-1 0.82 OH686_04585 Biosynthetic Aromatic amino acid aminotransferase alpha or Aromatic-amino-acid aminotransferase 0.91 OH686_04470 3-isopropylmalate dehydrogenase low > 80
Pseudomonas sp. RS175 0.77 PFR28_02838 Aromatic-amino-acid aminotransferase 0.87 PFR28_02821 3-isopropylmalate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_50 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.88 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.73 20
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_3960 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.89 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.78 22
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_21330 aromatic amino acid aminotransferase 0.88 AO356_21415 3-isopropylmalate dehydrogenase 0.73 31
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_27 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.88 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.73 17
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_20540 aromatic amino acid aminotransferase 0.88 AO353_20635 3-isopropylmalate dehydrogenase 0.86 3
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.87 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_1973 Aspartate transaminase 0.88 Psyr_1985 3-isopropylmalate dehydrogenase 0.32 57
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_1973 Aspartate transaminase 0.88 Psyr_1985 3-isopropylmalate dehydrogenase 0.46 44
Pseudomonas fluorescens SBW25 0.75 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.87 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.74 PS417_18690 aromatic amino acid aminotransferase 0.87 PS417_18585 3-isopropylmalate dehydrogenase 0.54 30
Ralstonia solanacearum PSI07 0.74 RPSI07_RS19245 aspartate/tyrosine/aromatic aminotransferase 0.62 RPSI07_RS14705 3-isopropylmalate dehydrogenase low > 81
Ralstonia solanacearum GMI1000 0.74 RS_RS05000 aspartate/tyrosine/aromatic aminotransferase 0.62 RS_RS09990 3-isopropylmalate dehydrogenase — —
Pseudomonas putida KT2440 0.73 PP_1972 aromatic-amino-acid aminotransferase 0.87 PP_1988 3-isopropylmalate dehydrogenase low > 96
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS14220 aspartate/tyrosine/aromatic aminotransferase 0.62 RALBFv3_RS02610 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum UW163 0.73 UW163_RS11685 aspartate/tyrosine/aromatic aminotransferase 0.62 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS09935 amino acid aminotransferase 0.63 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.71 20
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS05990 aromatic amino acid aminotransferase 0.62 RR42_RS14385 3-isopropylmalate dehydrogenase 0.64 20
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS06900 aspartate aminotransferase 0.62 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.92 3
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_04974 aromatic-amino-acid transaminase 0.62 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.47 24
Paraburkholderia graminis OAS925 0.71 ABIE53_001644 aromatic-amino-acid transaminase 0.62 ABIE53_004804 3-isopropylmalate dehydrogenase 0.57 14
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS23875 amino acid aminotransferase 0.62 QEN71_RS17620 3-isopropylmalate dehydrogenase low > 153
Dechlorosoma suillum PS 0.66 Dsui_2433 aspartate/tyrosine/aromatic aminotransferase 0.67 Dsui_3198 3-isopropylmalate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF4777 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) 0.63 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Variovorax sp. OAS795 0.65 ABID97_RS13990 amino acid aminotransferase 0.63 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Variovorax sp. SCN45 0.65 GFF944 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.63 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.50 93
Acidovorax sp. GW101-3H11 0.64 Ac3H11_4115 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.63 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Castellaniella sp019104865 MT123 0.62 ABCV34_RS05115 amino acid aminotransferase 0.62 ABCV34_RS04280 3-isopropylmalate dehydrogenase — —
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS16490 amino acid aminotransferase 0.42 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.70 25
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.130.1 hypothetical protein 0.83 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.65 16
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS15835 aspartate aminotransferase 0.63 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.44 8
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.44 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.63 3
Rhodanobacter denitrificans MT42 0.57 LRK55_RS10325 amino acid aminotransferase 0.44 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.53 48
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_13195 Aminotransferase 0.44 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Escherichia coli BL21 0.52 ECD_03926 tyrosine aminotransferase, tyrosine-repressible, PLP-dependent 0.51 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03989 Aromatic-amino-acid aminotransferase 0.51 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Escherichia coli ECRC62 0.52 BNILDI_06355 tyrB aromatic amino acid transaminase 0.51 BNILDI_08545 leuA 2-isopropylmalate synthase — —
Escherichia coli BW25113 0.52 b4054 tyrB tyrosine aminotransferase, tyrosine-repressible, PLP-dependent (NCBI) 0.51 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.51 49
Escherichia coli ECOR27 0.52 NOLOHH_05170 tyrB aromatic amino acid transaminase 0.51 NOLOHH_03065 leuA 2-isopropylmalate synthase low > 57
Shewanella sp. ANA-3 0.52 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.51 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) low > 73
Escherichia coli ECRC98 0.52 JDDGAC_16555 tyrB aromatic amino acid transaminase 0.52 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC101 0.52 OKFHMN_12920 tyrB aromatic amino acid transaminase 0.52 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECOR38 0.52 HEPCGN_11535 tyrB aromatic amino acid transaminase 0.52 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase low > 85
Escherichia coli ECRC102 0.52 NIAGMN_10765 tyrB aromatic amino acid transaminase 0.52 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC99 0.52 KEDOAH_15230 tyrB aromatic amino acid transaminase 0.52 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC101 0.52 MCAODC_03430 tyrB aromatic amino acid transaminase 0.52 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase — —
Enterobacter asburiae PDN3 0.51 EX28DRAFT_4250 Aspartate/tyrosine/aromatic aminotransferase 0.53 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.70 20
Escherichia coli Nissle 1917 0.51 ECOLIN_RS23420 aromatic amino acid transaminase 0.52 ECOLIN_RS00395 3-isopropylmalate dehydrogenase low > 52
Shewanella amazonensis SB2B 0.51 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.51 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) low > 62
Escherichia fergusonii Becca 0.51 EFB2_04546 Aromatic-amino-acid aminotransferase 0.52 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Enterobacter sp. TBS_079 0.51 MPMX20_00272 Aromatic-amino-acid aminotransferase 0.53 MPMX20_00768 3-isopropylmalate dehydrogenase 0.23 54
Acinetobacter radioresistens SK82 0.51 MPMX26_01473 Aromatic-amino-acid aminotransferase 0.70 MPMX26_00348 3-isopropylmalate dehydrogenase low > 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF1423 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) 0.52 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Shewanella oneidensis MR-1 0.51 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.51 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.51 LU632_RS23705 aspartate/tyrosine/aromatic aminotransferase 0.48 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase low > 74
Serratia liquefaciens MT49 0.50 IAI46_22930 aspartate/tyrosine/aromatic aminotransferase 0.52 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Pectobacterium carotovorum WPP14 0.50 HER17_RS03625 aspartate/tyrosine/aromatic aminotransferase 0.51 HER17_RS03080 3-isopropylmalate dehydrogenase low > 75
Shewanella loihica PV-4 0.50 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.51 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) low > 60
Klebsiella michiganensis M5al 0.50 BWI76_RS01925 aromatic amino acid aminotransferase 0.53 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.31 60
Dickeya dadantii 3937 0.50 DDA3937_RS17545 aspartate/tyrosine/aromatic aminotransferase 0.51 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Pantoea sp. MT58 0.50 IAI47_17835 aspartate/tyrosine/aromatic aminotransferase 0.49 IAI47_16005 3-isopropylmalate dehydrogenase — —
Dickeya dianthicola 67-19 0.50 HGI48_RS17595 aspartate/tyrosine/aromatic aminotransferase 0.51 HGI48_RS18060 3-isopropylmalate dehydrogenase low > 71
Dickeya dianthicola ME23 0.49 DZA65_RS18680 aspartate/tyrosine/aromatic aminotransferase 0.51 DZA65_RS19205 3-isopropylmalate dehydrogenase low > 75
Rahnella sp. WP5 0.49 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.51 EX31_RS03685 3-isopropylmalate dehydrogenase low > 89
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_06530 aromatic amino acid aminotransferase 0.51 CSW01_12600 3-isopropylmalate dehydrogenase low > 62

Not shown: 0 genomes with orthologs for Psest_1295 only; 36 genomes with orthologs for Psest_2589 only