Conservation of cofitness between GFF4856 and GFF2032 in Hydrogenophaga sp. GW460-11-11-14-LB1

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4856 HflK protein 1.0 GFF2032 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) 0.76 13
Variovorax sp. SCN45 0.66 GFF1002 HflK protein 0.23 GFF5033 ABC-type spermidine/putrescine transport system, permease component II low > 127
Acidovorax sp. GW101-3H11 0.65 Ac3H11_1801 HflK protein 0.21 Ac3H11_1612 ABC transporter, permease protein low > 79
Variovorax sp. OAS795 0.64 ABID97_RS14260 FtsH protease activity modulator HflK 0.22 ABID97_RS04045 ABC transporter permease low > 91
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS14765 membrane protein 0.18 HSERO_RS05400 polyamine ABC transporter permease low > 78
Ralstonia solanacearum PSI07 0.47 RPSI07_RS18065 FtsH protease activity modulator HflK 0.15 RPSI07_RS16225 ABC transporter permease low > 81
Ralstonia solanacearum UW163 0.47 UW163_RS12775 FtsH protease activity modulator HflK 0.15 UW163_RS14560 ABC transporter permease — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS15310 FtsH protease activity modulator HflK 0.15 RALBFv3_RS01250 ABC transporter permease — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS10950 FtsH protease activity modulator HflK 0.20 ABZR87_RS22470 ABC transporter permease low > 80
Ralstonia solanacearum GMI1000 0.44 RS_RS06120 FtsH protease activity modulator HflK 0.15 RS_RS08745 ABC transporter permease low > 80
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS06010 FtsH protease activity modulator HflK 0.45 QEN71_RS12960 ABC transporter permease subunit — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS02660 FtsH protease activity modulator HflK 0.41 ABCV34_RS02375 ABC transporter permease subunit — —
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_00523 protease FtsH subunit HflK 0.43 H281DRAFT_05183 putrescine transport system permease protein low > 103
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS12545 membrane protein 0.49 BPHYT_RS23135 putrescine/spermidine ABC transporter permease — —
Paraburkholderia graminis OAS925 0.39 ABIE53_002735 membrane protease subunit HflK 0.43 ABIE53_002367 putrescine transport system permease protein low > 113
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS02580 FtsH protease activity modulator HflK 0.40 PFLU_RS28755 ABC transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS02580 FtsH protease activity modulator HflK 0.40 PFLU_RS28755 ABC transporter permease subunit low > 109
Pseudomonas putida KT2440 0.30 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.40 PP_5177 spermidine/putrescine ABC transporter - permease subunit low > 96
Pseudomonas sp. RS175 0.30 PFR28_05123 Modulator of FtsH protease HflK 0.41 PFR28_04291 Inner membrane ABC transporter permease protein YdcV low > 88
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0574 protease FtsH subunit HflK 0.39 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0574 protease FtsH subunit HflK 0.39 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_01845 protease modulator HflK 0.25 CSW01_07150 spermidine/putrescine ABC transporter permease PotC low > 62
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_13155 hypothetical protein 0.41 AO353_29320 putrescine ABC transporter, permease component (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_08645 hypothetical protein 0.39 AO356_13175 spermidine/putrescine ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_1410 HflK protein 0.41 Pf1N1B4_4350 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) — —
Pseudomonas simiae WCS417 0.29 PS417_02500 membrane protein 0.40 PS417_27105 spermidine/putrescine ABC transporter permease — —
Pseudomonas stutzeri RCH2 0.29 Psest_0685 HflK protein 0.41 Psest_4280 ABC-type spermidine/putrescine transport system, permease component II — —
Shewanella sp. ANA-3 0.28 Shewana3_0599 HflK protein (RefSeq) 0.43 Shewana3_3094 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3612 HflK protein 0.39 Pf6N2E2_4517 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 103
Pseudomonas sp. S08-1 0.28 OH686_09460 HflK protein 0.41 OH686_11445 Putrescine transport system permease protein PotI low > 80
Shewanella oneidensis MR-1 0.28 SO0605 hflK hflK protein (NCBI ptt file) 0.44 SO1273 polyamine ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_152 HflK protein 0.39 PfGW456L13_932 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 87
Shewanella loihica PV-4 0.27 Shew_0568 HflK protein (RefSeq) 0.41 Shew_0976 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60
Rhodospirillum rubrum S1H 0.26 Rru_A2203 HflK (NCBI) 0.46 Rru_A1015 Binding-protein-dependent transport systems inner membrane component (NCBI) — —
Dickeya dianthicola ME23 0.26 DZA65_RS19670 FtsH protease activity modulator HflK 0.41 DZA65_RS09805 putrescine ABC transporter permease PotI low > 75
Shewanella amazonensis SB2B 0.26 Sama_3023 hflK protein (RefSeq) 0.43 Sama_2639 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.26 AMB_RS17650 FtsH protease activity modulator HflK 0.47 AMB_RS13195 putrescine ABC transporter permease PotI — —
Dickeya dianthicola 67-19 0.25 HGI48_RS18535 FtsH protease activity modulator HflK 0.41 HGI48_RS09495 putrescine ABC transporter permease PotI low > 71
Dickeya dadantii 3937 0.25 DDA3937_RS18600 FtsH protease activity modulator HflK 0.42 DDA3937_RS09475 putrescine ABC transporter permease PotI low > 74
Rahnella sp. WP5 0.25 EX31_RS08810 FtsH protease activity modulator HflK 0.42 EX31_RS09615 putrescine ABC transporter permease PotI low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF827 HflK protein 0.42 GFF761 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 78
Rhodopseudomonas palustris CGA009 0.24 TX73_018080 FtsH protease activity modulator HflK 0.40 TX73_021555 ABC transporter permease subunit low > 86
Pantoea sp. MT58 0.24 IAI47_02600 FtsH protease activity modulator HflK 0.43 IAI47_13030 putrescine ABC transporter permease PotI low > 76
Marinobacter adhaerens HP15 0.24 HP15_2497 HflK 0.43 HP15_937 spermidine/putrescine ABC transporter, permease protein low > 73
Pectobacterium carotovorum WPP14 0.24 HER17_RS02595 FtsH protease activity modulator HflK 0.41 HER17_RS12485 putrescine ABC transporter permease PotI low > 75
Serratia liquefaciens MT49 0.24 IAI46_01635 FtsH protease activity modulator HflK 0.43 IAI46_08385 putrescine ABC transporter permease PotI low > 86
Klebsiella michiganensis M5al 0.24 BWI76_RS02545 protease modulator HflK 0.39 BWI76_RS09475 putrescine ABC transporter permease PotI low > 92
Escherichia fergusonii Becca 0.24 EFB2_04361 Modulator of FtsH protease HflK 0.40 EFB2_03204 Inner membrane ABC transporter permease protein YdcV low > 86
Enterobacter sp. TBS_079 0.24 MPMX20_00455 Modulator of FtsH protease HflK 0.41 MPMX20_01498 Inner membrane ABC transporter permease protein YdcV low > 85
Escherichia coli Nissle 1917 0.24 ECOLIN_RS24240 FtsH protease activity modulator HflK 0.40 ECOLIN_RS04565 putrescine ABC transporter permease PotI — —
Escherichia coli ECOR38 0.24 HEPCGN_10475 hflK FtsH protease activity modulator HflK 0.39 HEPCGN_02085 potI putrescine ABC transporter permease PotI low > 85
Enterobacter asburiae PDN3 0.24 EX28DRAFT_3371 HflK protein 0.41 EX28DRAFT_2096 ABC-type spermidine/putrescine transport system, permease component II low > 76
Escherichia coli ECRC99 0.24 KEDOAH_15910 hflK FtsH protease activity modulator HflK 0.40 KEDOAH_21965 potI putrescine ABC transporter permease PotI — —
Escherichia coli ECRC98 0.23 JDDGAC_15885 hflK FtsH protease activity modulator HflK 0.40 JDDGAC_09580 potI putrescine ABC transporter permease PotI — —
Escherichia coli BL21 0.23 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor 0.39 ECD_00862 putrescine ABC transporter permease low > 60
Escherichia coli ECRC101 0.23 MCAODC_02760 hflK FtsH protease activity modulator HflK 0.40 MCAODC_25160 potI putrescine ABC transporter permease PotI — —
Escherichia coli ECRC101 0.23 OKFHMN_12245 hflK FtsH protease activity modulator HflK 0.40 OKFHMN_05945 potI putrescine ABC transporter permease PotI — —
Escherichia coli ECOR27 0.23 NOLOHH_04510 hflK FtsH protease activity modulator HflK 0.40 NOLOHH_22315 potI putrescine ABC transporter permease PotI low > 57
Escherichia coli ECRC102 0.23 NIAGMN_10095 hflK FtsH protease activity modulator HflK 0.40 NIAGMN_03990 potI putrescine ABC transporter permease PotI — —
Escherichia coli BW25113 0.23 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.40 b0857 potI putrescine transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC62 0.23 BNILDI_06980 hflK FtsH protease activity modulator HflK 0.40 BNILDI_20570 potH putrescine ABC transporter permease PotH — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03868 Modulator of FtsH protease HflK 0.39 OHPLBJKB_02811 Inner membrane ABC transporter permease protein YdcV low > 73
Phaeobacter inhibens DSM 17395 0.23 PGA1_c23710 putative protein HflK 0.40 PGA1_c34450 putrescine transport system permease protein PotI low > 62
Bosea sp. OAE506 0.23 ABIE41_RS12850 FtsH protease activity modulator HflK 0.35 ABIE41_RS21635 ABC transporter permease subunit low > 77
Dinoroseobacter shibae DFL-12 0.23 Dshi_2736 HflK protein (RefSeq) 0.18 Dshi_1598 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.31 38
Rhizobium sp. OAE497 0.21 ABIE40_RS11535 FtsH protease activity modulator HflK 0.40 ABIE40_RS03280 ABC transporter permease subunit low > 107
Sinorhizobium meliloti 1021 0.20 SMc01441 membrane bound protease 0.41 SMc00773 putrescine ABC transporter permease low > 103
Agrobacterium fabrum C58 0.19 Atu2045 HFLK protein 0.39 Atu0612 ABC transporter, membrane spanning protein low > 89

Not shown: 7 genomes with orthologs for GFF4856 only; 12 genomes with orthologs for GFF2032 only