Conservation of cofitness between Psest_2504 and Psest_1740 in Pseudomonas stutzeri RCH2

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2504 flagellar biosynthetic protein FliS 1.0 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family 0.59 17
Pseudomonas sp. S08-1 0.60 OH686_02865 flagellar protein FliS 0.84 OH686_02730 RNA polymerase sigma factor for flagellar operon low > 80
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_2599 Flagellar biosynthesis protein FliS 0.85 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon 0.81 11
Pseudomonas sp. RS175 0.57 PFR28_00826 Flagellar secretion chaperone FliS 0.84 PFR28_00852 RNA polymerase sigma factor FliA 0.81 20
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_03865 flagellar export chaperone FliS 0.85 AO356_03730 flagellar biosynthesis sigma factor 0.86 26
Pseudomonas fluorescens SBW25 0.53 PFLU_RS21805 flagellar export chaperone FliS 0.84 PFLU_RS21660 RNA polymerase sigma factor FliA 0.67 53
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS21805 flagellar export chaperone FliS 0.84 PFLU_RS21660 RNA polymerase sigma factor FliA 0.81 11
Pseudomonas simiae WCS417 0.53 PS417_19835 flagellar biosynthesis protein FliS 0.84 PS417_19695 flagellar biosynthesis sigma factor 0.85 9
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_3463 Flagellar protein FliS 0.83 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.75 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_3463 Flagellar protein FliS 0.83 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.59 7
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_18650 flagellar export chaperone FliS 0.85 AO353_18785 flagellar biosynthesis sigma factor 0.81 9
Pseudomonas putida KT2440 0.49 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.83 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.82 6
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_3597 Flagellar biosynthesis protein FliS 0.85 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon low > 87
Marinobacter adhaerens HP15 0.45 HP15_2368 flagellar protein FliS 0.60 HP15_2302 flagellar biosynthesis sigma factor FliA low > 73
Shewanella loihica PV-4 0.44 Shew_1361 fliS flagellar protein FliS (RefSeq) 0.55 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) 0.97 15
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_10675 flagellar protein FliS 0.53 CSW01_10335 RNA polymerase sigma factor FliA 0.87 47
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS23640 flagellar biosynthesis protein FliS 0.44 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor low > 128
Shewanella sp. ANA-3 0.42 Shewana3_1337 fliS flagellar protein FliS (RefSeq) 0.54 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) 0.88 8
Shewanella oneidensis MR-1 0.41 SO3233 fliS flagellar protein FliS (NCBI ptt file) 0.54 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) 0.59 55
Shewanella amazonensis SB2B 0.41 Sama_2302 fliS flagellar protein FliS (RefSeq) 0.55 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) 0.92 30
Lysobacter sp. OAE881 0.40 ABIE51_RS16735 flagellar export chaperone FliS 0.50 ABIE51_RS16865 RNA polymerase sigma factor FliA low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4027 Flagellar biosynthesis protein FliS 0.44 GFF1690 RNA polymerase sigma factor for flagellar operon low > 78
Ralstonia solanacearum PSI07 0.40 RPSI07_RS01505 flagellar export chaperone FliS 0.44 RPSI07_RS06165 RNA polymerase sigma factor FliA low > 81
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2793.1 Flagellar biosynthesis protein FliS 0.46 Xcc-8004.2832.1 RNA polymerase sigma factor for flagellar operon low > 74
Alteromonas macleodii MIT1002 0.39 MIT1002_01057 Flagellar protein FliS 0.56 MIT1002_01103 Sigma-F factor low > 70
Dickeya dadantii 3937 0.39 DDA3937_RS13350 flagellar export chaperone FliS 0.45 DDA3937_RS13300 RNA polymerase sigma factor FliA 0.77 20
Enterobacter sp. TBS_079 0.39 MPMX20_02856 Flagellar secretion chaperone FliS 0.44 MPMX20_02847 RNA polymerase sigma factor FliA 0.64 20
Rhodanobacter denitrificans MT42 0.39 LRK55_RS13210 flagellar export chaperone FliS 0.52 LRK55_RS13320 RNA polymerase sigma factor FliA low > 63
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0621 flagellar biosynthetic protein FliS 0.44 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family low > 76
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS13470 flagellar export chaperone FliS 0.52 LRK54_RS13580 RNA polymerase sigma factor FliA low > 59
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_02720 fliS flagellar export chaperone FliS 0.52 OKGIIK_02830 fliA RNA polymerase sigma factor FliA low > 52
Dechlorosoma suillum PS 0.38 Dsui_1780 flagellar biosynthetic protein FliS 0.49 Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family 0.48 41
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS21620 flagellar export chaperone FliS 0.45 RALBFv3_RS17485 RNA polymerase sigma factor FliA low > 76
Ralstonia solanacearum GMI1000 0.38 RS_RS19005 flagellar export chaperone FliS 0.44 RS_RS23830 RNA polymerase sigma factor FliA low > 80
Ralstonia solanacearum UW163 0.38 UW163_RS17570 flagellar export chaperone FliS 0.45 UW163_RS21665 RNA polymerase sigma factor FliA
Pectobacterium carotovorum WPP14 0.38 HER17_RS08300 flagellar export chaperone FliS 0.43 HER17_RS08355 RNA polymerase sigma factor FliA low > 75
Serratia liquefaciens MT49 0.38 IAI46_15800 flagellar export chaperone FliS 0.46 IAI46_15785 RNA polymerase sigma factor FliA low > 86
Dickeya dianthicola ME23 0.37 DZA65_RS13880 flagellar export chaperone FliS 0.46 DZA65_RS13835 RNA polymerase sigma factor FliA 0.91 31
Dickeya dianthicola 67-19 0.37 HGI48_RS13395 flagellar export chaperone FliS 0.46 HGI48_RS13350 RNA polymerase sigma factor FliA low > 71
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS28785 flagellar export chaperone FliS 0.48 QEN71_RS28940 RNA polymerase sigma factor FliA 0.88 114
Paraburkholderia graminis OAS925 0.36 ABIE53_000072 flagellar protein FliS 0.47 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA 0.63 47
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_05788 flagellar protein FliS 0.47 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG low > 103
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS18765 flagellar biosynthesis protein FliS 0.47 BPHYT_RS18925 RNA polymerase sigma70 low > 109
Pantoea sp. MT58 0.35 IAI47_08135 flagellar export chaperone FliS 0.46 IAI47_08160 RNA polymerase sigma factor FliA 0.41 25
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1447 Flagellar biosynthesis protein FliS 0.41 GFF1428 RNA polymerase sigma factor for flagellar operon low > 90
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS20140 flagellar export chaperone FliS 0.50 ABZR86_RS20265 RNA polymerase sigma factor FliA low > 74
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS22165 flagellar export chaperone FliS 0.44 ABZR87_RS18040 RNA polymerase sigma factor FliA 0.36 38
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1401 Flagellar biosynthesis protein FliS 0.44 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon low > 79
Erwinia tracheiphila SCR3 0.34 LU632_RS13845 fliS flagellar export chaperone FliS 0.46 LU632_RS13785 RNA polymerase sigma factor FliA
Rahnella sp. WP5 0.32 EX31_RS09465 flagellar export chaperone FliS 0.44 EX31_RS09450 RNA polymerase sigma factor FliA 0.67 2
Escherichia coli ECOR27 0.32 NOLOHH_16385 fliS flagellar export chaperone FliS 0.45 NOLOHH_16400 fliA RNA polymerase sigma factor FliA
Variovorax sp. SCN45 0.32 GFF5755 Flagellar biosynthesis protein FliS 0.40 GFF5774 RNA polymerase sigma factor for flagellar operon low > 127
Escherichia coli ECRC101 0.32 OKFHMN_25765 fliS flagellar export chaperone FliS 0.45 OKFHMN_25780 fliA RNA polymerase sigma factor FliA
Escherichia coli ECRC102 0.32 NIAGMN_02285 fliS flagellar export chaperone FliS 0.45 NIAGMN_02270 fliA RNA polymerase sigma factor FliA
Escherichia coli ECRC99 0.32 KEDOAH_02325 fliS flagellar export chaperone FliS 0.45 KEDOAH_02310 fliA RNA polymerase sigma factor FliA
Escherichia coli ECRC101 0.32 MCAODC_19625 fliS flagellar export chaperone FliS 0.45 MCAODC_19610 fliA RNA polymerase sigma factor FliA
Escherichia coli ECRC98 0.32 JDDGAC_00355 fliS flagellar export chaperone FliS 0.45 JDDGAC_00370 fliA RNA polymerase sigma factor FliA
Escherichia coli Nissle 1917 0.31 ECOLIN_RS10990 flagellar export chaperone FliS 0.45 ECOLIN_RS10975 RNA polymerase sigma factor FliA
Escherichia coli ECRC62 0.31 BNILDI_15175 fliS flagellar export chaperone FliS 0.45 BNILDI_15190 fliA RNA polymerase sigma factor FliA
Escherichia fergusonii Becca 0.31 EFB2_02020 Flagellar secretion chaperone FliS 0.45 EFB2_02023 RNA polymerase sigma factor FliA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01804 Flagellar secretion chaperone FliS 0.45 OHPLBJKB_01807 RNA polymerase sigma factor FliA low > 73
Escherichia coli ECOR38 0.31 HEPCGN_04120 fliS flagellar export chaperone FliS 0.45 HEPCGN_04135 fliA RNA polymerase sigma factor FliA low > 85
Escherichia coli BW25113 0.31 b1925 fliS flagellar protein FliS (NCBI) 0.45 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) 0.39 26
Castellaniella sp019104865 MT123 0.26 ABCV34_RS05620 flagellar export chaperone FliS 0.40 ABCV34_RS05605 RNA polymerase sigma factor FliA 0.48 2

Not shown: 0 genomes with orthologs for Psest_2504 only; 5 genomes with orthologs for Psest_1740 only