Conservation of cofitness between Psest_1004 and Psest_1653 in Pseudomonas stutzeri RCH2

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1004 Aspartate/tyrosine/aromatic aminotransferase 1.0 Psest_1653 transcription-repair coupling factor (mfd) 0.25 17
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_0836 Aminotransferase, class I and II 0.85 Psyr_1896 transcription-repair coupling factor low > 86
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_0836 Aminotransferase, class I and II 0.85 Psyr_1896 transcription-repair coupling factor low > 86
Pseudomonas segetis P6 0.86 MPMX49_01258 Aspartate aminotransferase 0.88 MPMX49_01844 Transcription-repair-coupling factor low > 75
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_14425 aminotransferase 0.86 AO353_00435 transcription-repair coupling factor low > 101
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_2863 Valine--pyruvate aminotransferase (EC 2.6.1.66) 0.85 Pf1N1B4_3916 Transcription-repair coupling factor low > 87
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1529 Valine--pyruvate aminotransferase (EC 2.6.1.66) 0.85 PfGW456L13_4027 Transcription-repair coupling factor low > 87
Pseudomonas simiae WCS417 0.84 PS417_23870 aminotransferase 0.85 PS417_07635 transcription-repair coupling factor low > 88
Pseudomonas fluorescens SBW25 0.84 PFLU_RS25710 pyridoxal phosphate-dependent aminotransferase 0.85 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS25710 pyridoxal phosphate-dependent aminotransferase 0.85 PFLU_RS07710 transcription-repair coupling factor 0.16 42
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_16100 aminotransferase 0.86 AO356_02270 transcription-repair coupling factor low > 104
Pseudomonas lactucae CFBP13502 0.83 GEMAOFIL_04925 Aspartate aminotransferase 0.86 GEMAOFIL_01659 Transcription-repair-coupling factor low > 93
Pseudomonas sp. S08-1 0.83 OH686_17285 Valine--pyruvate aminotransferase 0.88 OH686_21990 transcription-repair coupling factor low > 80
Pseudomonas sp. RS175 0.82 PFR28_03713 Aspartate aminotransferase 0.86 PFR28_01123 Transcription-repair-coupling factor low > 88
Pseudomonas aeruginosa PA14 0.82 IKLFDK_30005 pyridoxal phosphate-dependent aminotransferase 0.88 IKLFDK_15275 transcription-repair coupling factor low > 100
Pseudomonas sp. SVBP6 0.82 COO64_RS15065 pyridoxal phosphate-dependent aminotransferase 0.85 COO64_RS09460 mfd transcription-repair coupling factor low > 93
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5161 Valine--pyruvate aminotransferase (EC 2.6.1.66) ## AvtA 0.86 Pf6N2E2_2278 Transcription-repair coupling factor low > 103
Pseudomonas sp. DMC3 0.81 GFF4035 Aspartate aminotransferase 0.85 GFF1285 Transcription-repair-coupling factor low > 89
Pseudomonas sp. BP01 0.79 JOY50_RS27700 pyridoxal phosphate-dependent aminotransferase 0.83 JOY50_RS25100 mfd transcription-repair coupling factor low > 84
Pseudomonas putida KT2440 0.76 PP_4692 putative aspartate/tyrosine/aromatic aminotransferase 0.83 PP_2148 transcription-repair coupling factor low > 96
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.841.1 Valine--pyruvate aminotransferase (EC 2.6.1.66) 0.53 Xcc-8004.1775.1 Transcription-repair coupling factor low > 74
Dechlorosoma suillum PS 0.53 Dsui_0132 aspartate/tyrosine/aromatic aminotransferase 0.49 Dsui_2385 transcription-repair coupling factor Mfd low > 51
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS15405 aminotransferase 0.50 BPHYT_RS09290 helicase low > 109
Ralstonia solanacearum GMI1000 0.48 RS_RS03575 pyridoxal phosphate-dependent aminotransferase 0.49 RS_RS08275 transcription-repair coupling factor low > 80
Paraburkholderia graminis OAS925 0.48 ABIE53_003249 aspartate/methionine/tyrosine aminotransferase 0.50 ABIE53_002095 transcription-repair coupling factor (superfamily II helicase) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04024 Aspartate/methionine/tyrosine aminotransferase 0.50 H281DRAFT_00880 transcription-repair coupling factor low > 103
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS12800 pyridoxal phosphate-dependent aminotransferase 0.49 RALBFv3_RS01445 transcription-repair coupling factor low > 76
Ralstonia solanacearum PSI07 0.48 RPSI07_RS20420 pyridoxal phosphate-dependent aminotransferase 0.49 RPSI07_RS16040 transcription-repair coupling factor low > 81
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS03275 pyridoxal phosphate-dependent aminotransferase 0.50 QEN71_RS22060 transcription-repair coupling factor low > 153
Ralstonia solanacearum UW163 0.48 UW163_RS00765 pyridoxal phosphate-dependent aminotransferase 0.49 UW163_RS14755 transcription-repair coupling factor — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS08860 pyridoxal phosphate-dependent aminotransferase 0.50 ABZR87_RS13240 transcription-repair coupling factor low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS17885 aminotransferase 0.50 HSERO_RS15180 transcription-repair coupling factor low > 78
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS15580 aminotransferase 0.49 RR42_RS07845 transcription-repair coupling factor low > 128
Castellaniella sp019104865 MT123 0.45 ABCV34_RS15420 pyridoxal phosphate-dependent aminotransferase 0.47 ABCV34_RS08660 transcription-repair coupling factor low > 48
Alteromonas macleodii MIT1002 0.41 MIT1002_02344 Putative N-acetyl-LL-diaminopimelate aminotransferase 0.56 MIT1002_01646 Transcription-repair-coupling factor low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF5171 Aspartate aminotransferase (EC 2.6.1.1) 0.49 GFF4934 Transcription-repair coupling factor low > 90
Acidovorax sp. GW101-3H11 0.40 Ac3H11_3135 Aspartate aminotransferase (EC 2.6.1.1) 0.49 Ac3H11_328 Transcription-repair coupling factor low > 79
Bifidobacterium breve UCC2003 0.39 BBR_RS17965 aminotransferase class V-fold PLP-dependent enzyme 0.26 BBR_RS14115 transcription-repair coupling factor low > 34
Variovorax sp. OAS795 0.39 ABID97_RS17960 pyridoxal phosphate-dependent aminotransferase 0.49 ABID97_RS17285 transcription-repair coupling factor low > 91
Variovorax sp. SCN45 0.38 GFF573 Valine--pyruvate aminotransferase (EC 2.6.1.66) 0.49 GFF412 Transcription-repair coupling factor low > 127
Xanthobacter sp. DMC5 0.35 GFF231 Aspartate/prephenate aminotransferase 0.34 GFF946 Transcription-repair-coupling factor — —
Azospirillum sp. SherDot2 0.35 MPMX19_01971 putative N-acetyl-LL-diaminopimelate aminotransferase 0.33 MPMX19_00876 Transcription-repair-coupling factor low > 112
Phaeobacter inhibens DSM 17395 0.35 PGA1_c20300 aminotransferase 0.34 PGA1_c14920 transcription-repair-coupling factor Mfd low > 62
Bosea sp. OAE506 0.35 ABIE41_RS16175 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.32 ABIE41_RS15825 transcription-repair coupling factor low > 77
Dinoroseobacter shibae DFL-12 0.35 Dshi_1168 aminotransferase class I and II (RefSeq) 0.33 Dshi_1561 transcription-repair coupling factor (RefSeq) low > 64
Agrobacterium fabrum C58 0.35 Atu1334 aspartate transaminase 0.34 Atu1778 transcription-repair coupling factor low > 89
Rhodospirillum rubrum S1H 0.34 Rru_A2423 Aminotransferase, class I and II (NCBI) 0.33 Rru_A1726 Transcription-repair coupling factor (NCBI) 0.67 4
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2628 Aspartate/tyrosine/aromatic aminotransferase 0.56 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS06765 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.34 A4249_RS04775 transcription-repair coupling factor low > 48
Rhodopseudomonas palustris CGA009 0.33 TX73_012650 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.33 TX73_013805 transcription-repair coupling factor low > 86
Sinorhizobium meliloti 1021 0.33 SMc01340 aminotransferase 0.34 SMc04450 transcription-repair coupling factor low > 103
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_02539 aspartate aminotransferase 0.35 CCNA_01920 transcription-repair coupling factor Mfd low > 67
Caulobacter crescentus NA1000 0.32 CCNA_02539 aspartate aminotransferase 0.35 CCNA_01920 transcription-repair coupling factor Mfd low > 66
Rhizobium sp. OAE497 0.32 ABIE40_RS07510 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.33 ABIE40_RS09310 transcription-repair coupling factor low > 107
Magnetospirillum magneticum AMB-1 0.32 AMB_RS07030 1-aminocyclopropane-1-carboxylate deaminase 0.34 AMB_RS12390 transcription-repair coupling factor low > 64
Sphingobium sp. HT1-2 0.31 GFF1585 Valine--pyruvate aminotransferase (EC 2.6.1.66) 0.34 GFF3606 Transcription-repair coupling factor low > 95
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_06525 aspB aminotransferase 0.55 OKGIIK_09105 mfd transcription-repair coupling factor low > 53
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS08550 pyridoxal phosphate-dependent aminotransferase 0.56 ABZR86_RS21210 transcription-repair coupling factor low > 74
Rhodanobacter sp000427505 FW510-R12 0.18 LRK53_RS09430 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.55 LRK53_RS08005 transcription-repair coupling factor low > 59
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS00725 pyridoxal phosphate-dependent aminotransferase 0.56 LRK54_RS02040 transcription-repair coupling factor low > 59
Rhodanobacter denitrificans MT42 0.18 LRK55_RS00500 pyridoxal phosphate-dependent aminotransferase 0.56 LRK55_RS01815 transcription-repair coupling factor low > 63
Lysobacter sp. OAE881 0.18 ABIE51_RS06000 pyridoxal phosphate-dependent aminotransferase 0.54 ABIE51_RS14320 transcription-repair coupling factor low > 62

Not shown: 8 genomes with orthologs for Psest_1004 only; 43 genomes with orthologs for Psest_1653 only