Conservation of cofitness between PS417_03300 and PS417_07695 in Pseudomonas simiae WCS417

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03300 alanine acetyltransferase 1.0 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.23 8
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS03395 ribosomal-protein-alanine N-acetyltransferase 0.97 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS03395 ribosomal-protein-alanine N-acetyltransferase 0.97 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 109
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14585 ribosomal-protein-alanine acetyltransferase 0.92 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 101
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1551 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.92 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.46 3
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_2891 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.92 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_5188 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.89 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 103
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_16260 ribosomal-protein-alanine acetyltransferase 0.89 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 104
Pseudomonas sp. RS175 0.92 PFR28_03681 [Ribosomal protein S18]-alanine N-acetyltransferase 0.90 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 88
Pseudomonas putida KT2440 0.83 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.82 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.29 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.89 Psyr_1907 GTP cyclohydrolase I — —
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.89 Psyr_1907 GTP cyclohydrolase I low > 86
Pseudomonas stutzeri RCH2 0.80 Psest_1058 ribosomal-protein-alanine acetyltransferase 0.80 Psest_2714 7-cyano-7-deazaguanine reductase 0.21 12
Pseudomonas sp. S08-1 0.74 OH686_08035 ribosomal-protein-alanine acetyltransferase 0.78 OH686_22700 queuine synthase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.4455.1 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.45 Xcc-8004.4789.1 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 74
Lysobacter sp. OAE881 0.43 ABIE51_RS04455 ribosomal protein S18-alanine N-acetyltransferase 0.44 ABIE51_RS00515 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 62
Dechlorosoma suillum PS 0.42 Dsui_2404 ribosomal-protein-alanine acetyltransferase 0.54 Dsui_0505 7-cyano-7-deazaguanine reductase low > 51
Marinobacter adhaerens HP15 0.40 HP15_540 ribosomal-protein-alanine acetyltransferase 0.43 HP15_1463 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 73
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS10720 alanine acetyltransferase 0.50 HSERO_RS19515 7-cyano-7-deazaguanine reductase low > 78
Paraburkholderia graminis OAS925 0.38 ABIE53_002532 ribosomal-protein-alanine N-acetyltransferase 0.48 ABIE53_000759 7-cyano-7-deazaguanine reductase low > 113
Serratia liquefaciens MT49 0.38 IAI46_02870 ribosomal protein S18-alanine N-acetyltransferase 0.49 IAI46_21580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 86
Pectobacterium carotovorum WPP14 0.38 HER17_RS18090 ribosomal protein S18-alanine N-acetyltransferase 0.48 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS03330 ribosomal protein S18-alanine N-acetyltransferase 0.49 HGI48_RS04615 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS03375 ribosomal protein S18-alanine N-acetyltransferase 0.49 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Acidovorax sp. GW101-3H11 0.37 Ac3H11_667 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.49 Ac3H11_1595 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 79
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_03460 ribosomal-protein-alanine N-acetyltransferase 0.53 CSW01_04620 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 62
Rahnella sp. WP5 0.36 EX31_RS04110 ribosomal protein S18-alanine N-acetyltransferase 0.52 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 89
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS12055 acyltransferase 0.51 RR42_RS02310 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 128
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS06290 ribosomal protein S18-alanine N-acetyltransferase 0.48 QEN71_RS01975 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 153
Dickeya dadantii 3937 0.35 DDA3937_RS03180 ribosomal protein S18-alanine N-acetyltransferase 0.49 DDA3937_RS04655 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Pantoea sp. MT58 0.35 IAI47_16365 ribosomal protein S18-alanine N-acetyltransferase 0.48 IAI47_04050 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 76
Shewanella amazonensis SB2B 0.35 Sama_2596 ribosomal-protein-alanine acetyltransferase (RefSeq) 0.47 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF2766 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 0.49 GFF722 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 90
Escherichia coli Nissle 1917 0.35 ECOLIN_RS25100 ribosomal protein S18-alanine N-acetyltransferase 0.50 ECOLIN_RS15580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 52
Escherichia coli ECRC99 0.35 KEDOAH_16855 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 KEDOAH_07940 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli ECRC98 0.35 JDDGAC_14885 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli BL21 0.35 ECD_04248 ribosomal-protein-S18-alanine N-acetyltransferase 0.49 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) low > 60
Escherichia coli ECRC101 0.35 OKFHMN_11290 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli BW25113 0.35 b4373 rimI ribosomal-protein-alanine N-acetyltransferase (NCBI) 0.49 b2794 yqcD hypothetical protein (NCBI) low > 76
Escherichia coli ECRC102 0.35 NIAGMN_09140 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03689 Ribosomal-protein-alanine acetyltransferase 0.49 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 73
Escherichia coli ECRC101 0.35 MCAODC_01805 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia fergusonii Becca 0.35 EFB2_04074 [Ribosomal protein S18]-alanine N-acetyltransferase 0.50 EFB2_01123 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 86
Escherichia coli ECRC62 0.35 BNILDI_07990 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Acinetobacter radioresistens SK82 0.34 MPMX26_02428 [Ribosomal protein S18]-alanine N-acetyltransferase 0.41 MPMX26_02105 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 36
Escherichia coli ECOR38 0.34 HEPCGN_09295 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 85
Escherichia coli ECOR27 0.34 NOLOHH_03610 rimI ribosomal protein S18-alanine N-acetyltransferase 0.50 NOLOHH_12070 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 57
Ralstonia solanacearum UW163 0.33 UW163_RS13520 ribosomal-protein-alanine N-acetyltransferase 0.53 UW163_RS02195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS00190 ribosomal-protein-alanine N-acetyltransferase 0.53 RALBFv3_RS11390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS17290 ribosomal-protein-alanine N-acetyltransferase 0.54 RPSI07_RS21815 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Shewanella sp. ANA-3 0.33 Shewana3_0987 SSU ribosomal protein S18P alanine acetyltransferase (RefSeq) 0.50 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) — —
Enterobacter asburiae PDN3 0.33 EX28DRAFT_3581 ribosomal-protein-alanine acetyltransferase 0.50 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase low > 76
Klebsiella michiganensis M5al 0.33 BWI76_RS04090 ribosomal-protein-alanine N-acetyltransferase RimI 0.51 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 92
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS12265 alanine acetyltransferase 0.49 BPHYT_RS03135 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 109
Variovorax sp. SCN45 0.32 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) 0.47 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) 0.55 33
Variovorax sp. OAS795 0.32 ABID97_RS01660 ribosomal protein S18-alanine N-acetyltransferase 0.46 ABID97_RS07920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 91
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00584 [SSU ribosomal protein S18P]-alanine acetyltransferase 0.49 H281DRAFT_01889 7-cyano-7-deazaguanine reductase 0.43 8
Enterobacter sp. TBS_079 0.32 MPMX20_00671 [Ribosomal protein S18]-alanine N-acetyltransferase 0.50 MPMX20_03664 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 85
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS10505 ribosomal protein S18-alanine N-acetyltransferase 0.53 ABZR86_RS16195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Shewanella oneidensis MR-1 0.31 SO1160 rimI ribosomal-protein-alanine acetyltransferase (NCBI ptt file) 0.49 SO1608 conserved hypothetical protein (NCBI ptt file) low > 76
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS04340 ribosomal protein S18-alanine N-acetyltransferase 0.53 LRK54_RS10510 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 59
Rhodanobacter denitrificans MT42 0.31 LRK55_RS04115 ribosomal protein S18-alanine N-acetyltransferase 0.53 LRK55_RS10150 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 63
Erwinia tracheiphila SCR3 0.31 LU632_RS03760 rimI ribosomal protein S18-alanine N-acetyltransferase 0.48 LU632_RS06280 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Ralstonia solanacearum GMI1000 0.30 RS_RS06860 ribosomal-protein-alanine N-acetyltransferase 0.54 RS_RS02220 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_2236 [SSU ribosomal protein S18P]-alanine acetyltransferase (EC 2.3.1.128) 0.48 B158DRAFT_2159 7-cyano-7-deazaguanine reductase low > 40
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_11225 rimI ribosomal protein S18-alanine N-acetyltransferase 0.54 OKGIIK_13395 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 52
Shewanella loihica PV-4 0.28 Shew_2943 ribosomal-protein-alanine acetyltransferase (RefSeq) 0.50 Shew_2654 queF 7-cyano-7-deazaguanine reductase (RefSeq) — —

Not shown: 10 genomes with orthologs for PS417_03300 only; 4 genomes with orthologs for PS417_07695 only