Conservation of cofitness between EX31_RS19675 and EX31_RS22700 in Rahnella sp. WP5

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS19675 TSUP family transporter 1.0 EX31_RS22700 uracil phosphoribosyltransferase 0.31 17
Serratia liquefaciens MT49 0.79 IAI46_18015 TSUP family transporter 0.96 IAI46_18880 uracil phosphoribosyltransferase low > 86
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0277 Predicted permeases 0.94 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_03262 putative membrane transporter protein YfcA 0.95 MPMX20_03352 Uracil phosphoribosyltransferase low > 85
Pantoea sp. MT58 0.75 IAI47_06160 TSUP family transporter 0.97 IAI47_05185 uracil phosphoribosyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF1948 Putative membrane protein YfcA 0.95 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 78
Klebsiella michiganensis M5al 0.74 BWI76_RS20425 hypothetical protein 0.95 BWI76_RS20945 uracil phosphoribosyltransferase — —
Escherichia coli ECOR38 0.71 HEPCGN_21830 yfcA putative membrane transporter protein YfcA 0.94 HEPCGN_20980 upp uracil phosphoribosyltransferase low > 87
Escherichia fergusonii Becca 0.71 EFB2_01531 putative membrane transporter protein YfcA 0.94 EFB2_01400 Uracil phosphoribosyltransferase low > 86
Escherichia coli BW25113 0.71 b2327 yfcA conserved inner membrane protein (NCBI) 0.94 b2498 upp uracil phosphoribosyltransferase (VIMSS) low > 76
Escherichia coli ECRC99 0.71 KEDOAH_05570 yfcA putative membrane transporter protein YfcA 0.94 KEDOAH_06405 upp uracil phosphoribosyltransferase — —
Escherichia coli ECRC100 0.71 OKFHMN_22625 yfcA putative membrane transporter protein YfcA 0.94 OKFHMN_21815 upp uracil phosphoribosyltransferase low > 80
Escherichia coli BL21 0.71 ECD_02252 TauE/TSUP family inner membrane protein 0.94 ECD_02390 uracil phosphoribosyltransferase low > 61
Escherichia coli ECOR27 0.71 NOLOHH_14260 yfcA putative membrane transporter protein YfcA 0.94 NOLOHH_13465 upp uracil phosphoribosyltransferase low > 75
Escherichia coli Nissle 1917 0.71 ECOLIN_RS13480 sulfite exporter TauE/SafE family protein 0.94 ECOLIN_RS14185 uracil phosphoribosyltransferase — —
Escherichia coli ECRC101 0.71 MCAODC_13665 yfcA putative membrane transporter protein YfcA 0.94 MCAODC_12345 upp uracil phosphoribosyltransferase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01378 putative membrane transporter protein YfcA 0.94 OHPLBJKB_01228 Uracil phosphoribosyltransferase low > 73
Escherichia coli ECRC98 0.71 JDDGAC_26585 yfcA putative membrane transporter protein YfcA 0.94 JDDGAC_25760 upp uracil phosphoribosyltransferase low > 86
Escherichia coli ECRC102 0.71 NIAGMN_20400 yfcA putative membrane transporter protein YfcA 0.94 NIAGMN_19585 upp uracil phosphoribosyltransferase — —
Escherichia coli ECRC62 0.71 BNILDI_13180 yfcA putative membrane transporter protein YfcA 0.94 BNILDI_12275 upp uracil phosphoribosyltransferase low > 75
Pectobacterium carotovorum WPP14 0.71 HER17_RS06945 sulfite exporter TauE/SafE family protein 0.94 HER17_RS15460 uracil phosphoribosyltransferase low > 75
Erwinia tracheiphila SCR3 0.69 LU632_RS07785 sulfite exporter TauE/SafE family protein 0.95 LU632_RS08280 upp uracil phosphoribosyltransferase low > 74
Dickeya dadantii 3937 0.69 DDA3937_RS14570 TSUP family transporter 0.92 DDA3937_RS06030 uracil phosphoribosyltransferase low > 74
Dickeya dianthicola 67-19 0.65 HGI48_RS14520 TSUP family transporter 0.93 HGI48_RS06075 uracil phosphoribosyltransferase low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS15455 TSUP family transporter 0.92 DZA65_RS06425 uracil phosphoribosyltransferase low > 75
Shewanella sp. ANA-3 0.54 Shewana3_2613 hypothetical protein (RefSeq) 0.90 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_1266 hypothetical protein (RefSeq) 0.88 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.53 SO2846 conserved hypothetical protein (NCBI ptt file) 0.89 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) low > 76
Azospirillum sp. SherDot2 0.51 MPMX19_00682 putative membrane transporter protein YfcA 0.45 MPMX19_02205 Uracil phosphoribosyltransferase low > 112
Azospirillum brasilense Sp245 0.50 AZOBR_RS10405 membrane protein 0.46 AZOBR_RS03150 uracil phosphoribosyltransferase low > 97
Shewanella loihica PV-4 0.48 Shew_2464 hypothetical protein (RefSeq) 0.90 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) low > 60
Castellaniella sp019104865 MT123 0.45 ABCV34_RS12215 TSUP family transporter 0.70 ABCV34_RS15380 uracil phosphoribosyltransferase low > 48
Agrobacterium fabrum C58 0.45 Atu1591 hypothetical protein 0.53 Atu0135 uracil phosphoribosyltransferase low > 89
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_12070 hypothetical protein 0.91 CSW01_11345 uracil phosphoribosyltransferase low > 62
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_00376 putative membrane spanning protein 0.52 CCNA_02351 uracil phosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.40 CCNA_00376 putative membrane spanning protein 0.52 CCNA_02351 uracil phosphoribosyltransferase low > 66
Rhizobium sp. OAE497 0.39 ABIE40_RS11125 TSUP family transporter 0.55 ABIE40_RS00825 uracil phosphoribosyltransferase low > 107
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_369 Putative membrane protein YfcA 0.73 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Lysobacter sp. OAE881 0.38 ABIE51_RS11860 TSUP family transporter 0.74 ABIE51_RS15050 uracil phosphoribosyltransferase low > 62
Phaeobacter inhibens DSM 17395 0.37 PGA1_c36170 Predicted permeases 0.53 PGA1_c11960 uracil phosphoribosyltransferase Upp low > 62
Pseudomonas sp. RS175 0.31 PFR28_02189 putative membrane transporter protein YfcA 0.72 PFR28_03641 Uracil phosphoribosyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_4779 Membrane protein, putative 0.73 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_1267 Membrane protein, putative 0.72 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 103
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_25900 hypothetical protein 0.72 AO356_16565 uracil phosphoribosyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_26530 hypothetical protein 0.73 AO353_14855 uracil phosphoribosyltransferase low > 101
Pseudomonas simiae WCS417 0.30 PS417_12880 membrane protein 0.73 PS417_04435 uracil phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS13560 TSUP family transporter 0.73 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS13560 TSUP family transporter 0.73 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas stutzeri RCH2 0.29 Psest_2079 Predicted permeases 0.73 Psest_1120 uracil phosphoribosyltransferase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_2454 Protein of unknown function DUF81 0.73 Psyr_0969 uracil phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_2454 Protein of unknown function DUF81 0.73 Psyr_0969 uracil phosphoribosyltransferase low > 86
Ralstonia solanacearum GMI1000 0.27 RS_RS16720 membrane protein 0.49 RS_RS10980 uracil phosphoribosyltransferase low > 80
Pseudomonas sp. S08-1 0.26 OH686_03525 hypothetical protein 0.72 OH686_17985 uracil phosphoribosyltransferase low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS08365 membrane protein 0.48 RPSI07_RS13695 uracil phosphoribosyltransferase low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF1891 FIG011065: hypothetical protein 0.51 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 90
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS04180 TSUP family transporter 0.47 ABZR87_RS15395 uracil phosphoribosyltransferase low > 80
Acidovorax sp. GW101-3H11 0.25 Ac3H11_3324 FIG011065: hypothetical protein 0.53 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 79
Dechlorosoma suillum PS 0.25 Dsui_3484 putative permease 0.73 Dsui_2333 uracil phosphoribosyltransferase low > 51
Pseudomonas putida KT2440 0.25 PP_0487 conserved membrane protein of unknown function 0.71 PP_0746 Uracil phosphoribosyltransferase low > 96
Fusobacterium nucleatum SB010 0.24 HUW76_01290 TSUP family transporter 0.53 HUW76_07615 uracil phosphoribosyltransferase low > 35
Acinetobacter radioresistens SK82 0.24 MPMX26_02777 putative membrane transporter protein YfcA 0.67 MPMX26_02542 Uracil phosphoribosyltransferase low > 36
Variovorax sp. SCN45 0.24 GFF5022 FIG011065: hypothetical protein 0.49 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.41 67
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS10460 hypothetical protein 0.21 CA265_RS19460 uracil phosphoribosyltransferase low > 88
Ralstonia solanacearum UW163 0.23 UW163_RS04705 membrane protein 0.48 UW163_RS10140 uracil phosphoribosyltransferase — —
Variovorax sp. OAS795 0.23 ABID97_RS04095 TSUP family transporter 0.50 ABID97_RS16850 uracil phosphoribosyltransferase low > 91
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS23970 membrane protein 0.46 HSERO_RS03500 uracil phosphoribosyltransferase low > 78
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS20255 membrane protein 0.53 RR42_RS30815 uracil phosphoribosyltransferase low > 128
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_18905 hypothetical protein 0.25 CA264_14760 uracil phosphoribosyltransferase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.5298.1 FIG011065: hypothetical protein 0.71 Xcc-8004.2160.1 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 74
Paraburkholderia sabiae LMG 24235 0.11 QEN71_RS15530 sulfite exporter TauE/SafE family protein 0.48 QEN71_RS24390 uracil phosphoribosyltransferase low > 153
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS17725 sulfite exporter TauE/SafE family protein 0.48 RALBFv3_RS03530 uracil phosphoribosyltransferase low > 76
Marinobacter adhaerens HP15 0.10 HP15_2204 membrane protein containing DUF81 0.71 HP15_2306 uracil phosphoribosyltransferase low > 73

Not shown: 1 genomes with orthologs for EX31_RS19675 only; 27 genomes with orthologs for EX31_RS22700 only