| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_00078 | | global transcription factor | 1.0 | ECD_04042 | | HflB protease modulator specific for phage lambda cII repressor | 0.56 | 13 |
| Escherichia coli BW25113 | 1.00 | b0076 | leuO | probable transcriptional activator for leuABCD operon (VIMSS) | 1.00 | b4175 | hflC | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03582 | | HTH-type transcriptional regulator LeuO | 1.00 | OHPLBJKB_03867 | | Modulator of FtsH protease HflC | low | > 73 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_08560 | leuO | transcriptional regulator LeuO | 1.00 | BNILDI_06985 | hflC | protease modulator HflC | low | > 75 |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_10705 | leuO | transcriptional regulator LeuO | 1.00 | OKFHMN_12240 | hflC | protease modulator HflC | low | > 80 |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_14300 | leuO | transcriptional regulator LeuO | 1.00 | JDDGAC_15880 | hflC | protease modulator HflC | low | > 86 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS00410 | | transcriptional regulator LeuO | 1.00 | ECOLIN_RS24245 | | protease modulator HflC | — | — |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_08555 | leuO | transcriptional regulator LeuO | 1.00 | NIAGMN_10090 | hflC | protease modulator HflC | — | — |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_03050 | leuO | transcriptional regulator LeuO | 1.00 | NOLOHH_04505 | hflC | protease modulator HflC | low | > 75 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_01220 | leuO | transcriptional regulator LeuO | 1.00 | MCAODC_02755 | hflC | protease modulator HflC | low | > 87 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_17450 | leuO | transcriptional regulator LeuO | 1.00 | KEDOAH_15915 | hflC | protease modulator HflC | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_03970 | | HTH-type transcriptional regulator LeuO | 1.00 | EFB2_04360 | | Modulator of FtsH protease HflC | low | > 86 |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_08685 | leuO | transcriptional regulator LeuO | 1.00 | HEPCGN_10470 | hflC | protease modulator HflC | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.89 | GFF162 | | Probable transcriptional activator for leuABCD operon | 0.89 | GFF828 | | HflC protein | low | > 78 |
| Enterobacter asburiae PDN3 | 0.83 | EX28DRAFT_3672 | | Transcriptional regulator | 0.85 | EX28DRAFT_3372 | | HflC protein | low | > 76 |
| Klebsiella michiganensis M5al | 0.82 | BWI76_RS04690 | | transcriptional regulator LeuO | 0.87 | BWI76_RS02550 | | protease modulator HflC | low | > 92 |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_00770 | | HTH-type transcriptional regulator LeuO | 0.87 | MPMX20_00456 | | Modulator of FtsH protease HflC | low | > 85 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_03365 | | transcriptional regulator LeuO | 0.79 | IAI46_01640 | | protease modulator HflC | low | > 86 |
| Rahnella sp. WP5 | 0.55 | EX31_RS03675 | | transcriptional regulator LeuO | 0.79 | EX31_RS08805 | | protease modulator HflC | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_12575 | | transcriptional regulator LeuO | 0.52 | CSW01_01850 | | protease modulator HflC | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.23 | Psest_2127 | | Transcriptional regulator | 0.30 | Psest_0686 | | Membrane protease subunits, stomatin/prohibitin homologs | — | — |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS26910 | | LysR family transcriptional regulator | 0.24 | ABID97_RS14265 | | protease modulator HflC | — | — |
| Pseudomonas putida KT2440 | 0.22 | PP_2436 | | Transcriptional regulator, LysR family | 0.30 | PP_4891 | | integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex | low | > 96 |
| Pseudomonas sp. RS175 | 0.22 | PFR28_01264 | | PCP degradation transcriptional activation protein | 0.28 | PFR28_05124 | | Modulator of FtsH protease HflC | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.31 | Psyr_0575 | | protease FtsH subunit HflC | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_01560 | | LysR family transcriptional regulator | 0.31 | AO356_08640 | | membrane protease HflC | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_2187 | | Transcriptional regulator, LysR family | 0.31 | Pf6N2E2_3611 | | HflC protein | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.21 | Pf1N1B4_3992 | | Transcriptional regulator, LysR family | 0.32 | Pf1N1B4_1409 | | HflC protein | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.21 | Psyr_2473 | | transcriptional regulator, LysR family | 0.31 | Psyr_0575 | | protease FtsH subunit HflC | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.21 | PfGW456L13_2596 | | Transcriptional regulator, LysR family | 0.31 | PfGW456L13_151 | | HflC protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.21 | AO353_20375 | | LysR family transcriptional regulator | 0.31 | AO353_13160 | | membrane protease HflC | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.30 | PFLU_RS02585 | | protease modulator HflC | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS18945 | | LysR family transcriptional regulator | 0.30 | PFLU_RS02585 | | protease modulator HflC | low | > 109 |
| Pseudomonas simiae WCS417 | 0.21 | PS417_16995 | | LysR family transcriptional regulator | 0.28 | PS417_02505 | | membane protease HflC | — | — |
| Shewanella oneidensis MR-1 | 0.20 | SO1607 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.49 | SO0606 | hflC | hflC protein (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.20 | MIT1002_01758 | | HTH-type transcriptional regulator LeuO | 0.49 | MIT1002_03785 | | Modulator of FtsH protease HflC | low | > 70 |
| Marinobacter adhaerens HP15 | 0.20 | HP15_1665 | | transcriptional regulator, LysR family | 0.32 | HP15_2496 | | HflC | low | > 73 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.20 | GFF4425 | | Transcriptional regulator, LysR family | 0.20 | GFF4855 | | HflC protein | low | > 90 |
| Ralstonia solanacearum GMI1000 | 0.20 | RS_RS10140 | | LysR family transcriptional regulator | 0.30 | RS_RS06125 | | protease modulator HflC | — | — |
| Ralstonia solanacearum PSI07 | 0.20 | RPSI07_RS14540 | | LysR family transcriptional regulator | 0.30 | RPSI07_RS18060 | | protease modulator HflC | low | > 81 |
| Pseudomonas sp. S08-1 | 0.20 | OH686_00880 | | Transcriptional regulator, LysR family | 0.29 | OH686_09455 | | HflC protein | low | > 80 |
| Variovorax sp. SCN45 | 0.20 | GFF4989 | | Transcriptional regulator, LysR family | 0.23 | GFF1003 | | HflC protein | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.20 | ABZR87_RS14695 | | LysR family transcriptional regulator | 0.28 | ABZR87_RS10955 | | protease modulator HflC | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS30005 | | LysR family transcriptional regulator | 0.29 | RR42_RS13100 | | membrane protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.20 | HSERO_RS24025 | | LysR family transcriptional regulator | 0.28 | HSERO_RS14760 | | membrane protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.19 | RALBFv3_RS02770 | | LysR family transcriptional regulator | 0.30 | RALBFv3_RS15315 | | protease modulator HflC | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.19 | QEN71_RS33090 | | LysR family transcriptional regulator | 0.22 | QEN71_RS06015 | | protease modulator HflC | low | > 153 |
| Ralstonia solanacearum UW163 | 0.19 | UW163_RS10955 | | LysR family transcriptional regulator | 0.30 | UW163_RS12780 | | protease modulator HflC | — | — |
| Agrobacterium fabrum C58 | 0.19 | Atu5084 | | LysR family transcriptional regulator | 0.26 | Atu2044 | | HFLC protein | low | > 89 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.19 | H281DRAFT_03847 | | transcriptional regulator, LysR family | 0.22 | H281DRAFT_00524 | | protease FtsH subunit HflC | — | — |
| Rhizobium sp. OAE497 | 0.19 | ABIE40_RS05450 | | LysR family transcriptional regulator | 0.21 | ABIE40_RS11530 | | protease modulator HflC | low | > 107 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_4841 | | FIG000557: hypothetical protein co-occurring with RecR | 0.25 | Ac3H11_1802 | | HflC protein | low | > 79 |
| Sinorhizobium meliloti 1021 | 0.19 | SMa0307 | | LysR family transcriptional regulator | 0.23 | SMc01440 | | hydrolase serine protease transmembrane protein | low | > 103 |
| Shewanella loihica PV-4 | 0.19 | Shew_2857 | | LysR family transcriptional regulator (RefSeq) | 0.47 | Shew_0569 | | HflC protein (RefSeq) | low | > 60 |
| Azospirillum sp. SherDot2 | 0.18 | MPMX19_03531 | | PCP degradation transcriptional activation protein | 0.29 | MPMX19_01250 | | Modulator of FtsH protease HflC | — | — |
| Bosea sp. OAE506 | 0.18 | ABIE41_RS06780 | | LysR family transcriptional regulator | 0.26 | ABIE41_RS12855 | | protease modulator HflC | low | > 77 |
| Paraburkholderia graminis OAS925 | 0.18 | ABIE53_004542 | | DNA-binding transcriptional LysR family regulator | 0.24 | ABIE53_002734 | | membrane protease subunit HflC | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.18 | BPHYT_RS30310 | | LysR family transcriptional regulator | 0.20 | BPHYT_RS12540 | | membrane protein | — | — |
| Shewanella amazonensis SB2B | 0.17 | Sama_2520 | | putative transcriptional regulator (RefSeq) | 0.48 | Sama_3022 | | hflC protein (RefSeq) | low | > 62 |
| Azospirillum brasilense Sp245 | 0.17 | AZOBR_RS27530 | | LysR family transcriptional regulator | 0.26 | AZOBR_RS06525 | | membrane protein | 0.40 | 44 |
| Pantoea sp. MT58 | 0.17 | IAI47_19555 | | LysR family transcriptional regulator | 0.82 | IAI47_02605 | | protease modulator HflC | low | > 76 |
| Dickeya dadantii 3937 | 0.15 | DDA3937_RS21355 | | LysR family transcriptional regulator | 0.74 | DDA3937_RS18595 | | protease modulator HflC | — | — |
| Kangiella aquimarina DSM 16071 | 0.14 | B158DRAFT_1234 | | Transcriptional regulator | 0.35 | B158DRAFT_1955 | | HflC protein | low | > 40 |
| Castellaniella sp019104865 MT123 | 0.14 | ABCV34_RS11570 | | LysR family transcriptional regulator | 0.27 | ABCV34_RS02665 | | protease modulator HflC | — | — |
| Pectobacterium carotovorum WPP14 | 0.13 | HER17_RS04190 | | LysR family transcriptional regulator | 0.79 | HER17_RS02600 | | protease modulator HflC | low | > 75 |
| Rhodopseudomonas palustris CGA009 | 0.12 | TX73_009285 | | LysR family transcriptional regulator | 0.28 | TX73_018075 | | protease modulator HflC | low | > 86 |
| Dyella japonica UNC79MFTsu3.2 | 0.11 | ABZR86_RS07360 | | LysR family transcriptional regulator | 0.30 | ABZR86_RS08350 | | protease modulator HflC | low | > 74 |
| Dinoroseobacter shibae DFL-12 | 0.09 | Dshi_2347 | | transcriptional regulator, LysR family (RefSeq) | 0.28 | Dshi_2735 | | HflC protein (RefSeq) | low | > 64 |
Not shown: 3 genomes with orthologs for ECD_00078 only; 17 genomes with orthologs for ECD_04042 only