Conservation of cofitness between ECD_01571 and ECD_04041 in Escherichia coli BL21

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01571 pyridine nucleotide transhydrogenase, beta subunit 1.0 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor 0.43 19
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02124 NAD(P) transhydrogenase subunit beta 1.00 OHPLBJKB_03868 Modulator of FtsH protease HflK low > 73
Escherichia fergusonii Becca 1.00 EFB2_02390 NAD(P) transhydrogenase subunit beta 1.00 EFB2_04361 Modulator of FtsH protease HflK low > 86
Escherichia coli BW25113 1.00 b1602 pntB pyridine nucleotide transhydrogenase (NCBI) 1.00 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_17715 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 MCAODC_02760 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECOR27 1.00 NOLOHH_18200 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 NOLOHH_04510 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC99 1.00 KEDOAH_00410 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 KEDOAH_15910 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC98 1.00 JDDGAC_02285 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 JDDGAC_15885 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC101 1.00 OKFHMN_27695 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 OKFHMN_12245 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC102 1.00 NIAGMN_00380 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 NIAGMN_10095 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECOR38 1.00 HEPCGN_06070 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 HEPCGN_10475 hflK FtsH protease activity modulator HflK low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS08950 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 ECOLIN_RS24240 FtsH protease activity modulator HflK — —
Escherichia coli ECRC62 1.00 BNILDI_16990 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 BNILDI_06980 hflK FtsH protease activity modulator HflK — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF1795 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.83 GFF827 HflK protein low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS16200 NAD(P) transhydrogenase subunit beta 0.74 BWI76_RS02545 protease modulator HflK low > 92
Enterobacter sp. TBS_079 0.93 MPMX20_02032 NAD(P) transhydrogenase subunit beta 0.74 MPMX20_00455 Modulator of FtsH protease HflK low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_1543 NAD/NADP transhydrogenase beta subunit 0.81 EX28DRAFT_3371 HflK protein low > 76
Rahnella sp. WP5 0.87 EX31_RS07210 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.64 EX31_RS08810 FtsH protease activity modulator HflK low > 89
Serratia liquefaciens MT49 0.86 IAI46_13270 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.69 IAI46_01635 FtsH protease activity modulator HflK low > 86
Pectobacterium carotovorum WPP14 0.86 HER17_RS10515 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.70 HER17_RS02595 FtsH protease activity modulator HflK low > 75
Dickeya dadantii 3937 0.85 DDA3937_RS10960 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.68 DDA3937_RS18600 FtsH protease activity modulator HflK low > 74
Erwinia tracheiphila SCR3 0.85 LU632_RS11430 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.67 LU632_RS02065 hflK FtsH protease activity modulator HflK low > 74
Pantoea sp. MT58 0.85 IAI47_09570 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.67 IAI47_02600 FtsH protease activity modulator HflK low > 76
Dickeya dianthicola 67-19 0.85 HGI48_RS10910 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.68 HGI48_RS18535 FtsH protease activity modulator HflK 0.67 29
Dickeya dianthicola ME23 0.85 DZA65_RS11370 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.69 DZA65_RS19670 FtsH protease activity modulator HflK low > 75
Shewanella oneidensis MR-1 0.81 SO3741 pntB NAD(P) transhydrogenase, beta subunit (NCBI ptt file) 0.45 SO0605 hflK hflK protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_0853 pntB pyridine nucleotide transhydrogenase (RefSeq) 0.46 Shewana3_0599 HflK protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.79 Sama_2841 pntB pyridine nucleotide transhydrogenase (RefSeq) 0.46 Sama_3023 hflK protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_17045 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.46 CSW01_01845 protease modulator HflK low > 62
Magnetospirillum magneticum AMB-1 0.64 AMB_RS14195 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.24 AMB_RS17650 FtsH protease activity modulator HflK — —
Acidovorax sp. GW101-3H11 0.63 Ac3H11_662 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.27 Ac3H11_1801 HflK protein low > 79
Agrobacterium fabrum C58 0.57 Atu2494 NAD(P)+ transhydrogenase beta chain 0.22 Atu2045 HFLK protein low > 89
Phaeobacter inhibens DSM 17395 0.57 PGA1_c10040 NAD(P) transhydrogenase subunit beta 0.24 PGA1_c23710 putative protein HflK low > 62
Dinoroseobacter shibae DFL-12 0.56 Dshi_1234 NAD(P)(+) transhydrogenase (AB-specific) (RefSeq) 0.23 Dshi_2736 HflK protein (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.50 Rru_A2181 NAD(P) transhydrogenase, beta subunit (NCBI) 0.22 Rru_A2203 HflK (NCBI) — —
Rhodopseudomonas palustris CGA009 0.50 TX73_021670 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.25 TX73_018080 FtsH protease activity modulator HflK — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS10180 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.29 ABCV34_RS02660 FtsH protease activity modulator HflK — —
Azospirillum sp. SherDot2 0.49 MPMX19_01276 NAD(P) transhydrogenase subunit beta 0.22 MPMX19_01251 Modulator of FtsH protease HflK — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_10870 NAD synthetase 0.35 AO356_08645 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_11080 NAD synthetase 0.35 AO353_13155 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_5018 NAD(P) transhydrogenase, beta subunit 0.34 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_5018 NAD(P) transhydrogenase, beta subunit 0.34 Psyr_0574 protease FtsH subunit HflK low > 86
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS01355 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.29 ABZR87_RS10950 FtsH protease activity modulator HflK low > 80
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4040 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.34 Pf6N2E2_3612 HflK protein low > 103
Pseudomonas sp. RS175 0.48 PFR28_04723 NAD(P) transhydrogenase subunit beta 0.35 PFR28_05123 Modulator of FtsH protease HflK low > 88
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS00545 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.36 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas fluorescens SBW25 0.48 PFLU_RS00545 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.36 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1820 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.36 Pf1N1B4_1410 HflK protein — —
Pseudomonas stutzeri RCH2 0.48 Psest_4205 NAD/NADP transhydrogenase beta subunit 0.34 Psest_0685 HflK protein — —
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_558 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.34 PfGW456L13_152 HflK protein low > 87
Pseudomonas simiae WCS417 0.48 PS417_00560 NAD synthetase 0.35 PS417_02500 membrane protein — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS11515 NAD synthetase 0.30 RPSI07_RS18065 FtsH protease activity modulator HflK low > 81
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS05785 NAD(P) transhydrogenase subunit beta 0.30 RALBFv3_RS15310 FtsH protease activity modulator HflK low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS07840 NAD(P) transhydrogenase subunit beta 0.30 UW163_RS12775 FtsH protease activity modulator HflK — —
Pseudomonas putida KT2440 0.47 PP_0155 pyridine nucleotide transhydrogenase, beta subunit 0.33 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS26720 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.25 QEN71_RS06010 FtsH protease activity modulator HflK low > 153
Ralstonia solanacearum GMI1000 0.46 RS_RS13675 NAD(P) transhydrogenase subunit beta 0.28 RS_RS06120 FtsH protease activity modulator HflK low > 80
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS25230 NAD synthetase 0.28 RR42_RS13105 membrane protein — —
Variovorax sp. OAS795 0.46 ABID97_RS04440 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.28 ABID97_RS14260 FtsH protease activity modulator HflK low > 91
Sinorhizobium meliloti 1021 0.46 SMc03938 NAD(P) transhydrogenase subunit beta 0.23 SMc01441 membrane bound protease low > 103
Bosea sp. OAE506 0.45 ABIE41_RS09270 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.23 ABIE41_RS12850 FtsH protease activity modulator HflK low > 77
Pseudomonas sp. S08-1 0.45 OH686_11935 NAD(P) transhydrogenase subunit beta 0.32 OH686_09460 HflK protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF2606 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.28 GFF4856 HflK protein low > 90
Shewanella loihica PV-4 0.43 Shew_0662 NAD(P) transhydrogenase, beta subunit (RefSeq) 0.45 Shew_0568 HflK protein (RefSeq) low > 60
Rhizobium sp. OAE497 0.42 ABIE40_RS16590 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.22 ABIE40_RS11535 FtsH protease activity modulator HflK low > 107
Alteromonas macleodii MIT1002 0.41 MIT1002_03907 NAD(P) transhydrogenase subunit beta 0.45 MIT1002_03786 Modulator of FtsH protease HflK 0.88 9
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS03825 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.28 LRK54_RS00620 FtsH protease activity modulator HflK low > 59
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_10675 pntB NAD(P) transhydrogenase subunit beta 0.28 OKGIIK_06640 hflK FtsH protease activity modulator HflK low > 52
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS22120 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.25 ABZR86_RS08355 FtsH protease activity modulator HflK low > 74
Rhodanobacter denitrificans MT42 0.35 LRK55_RS03575 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.28 LRK55_RS00390 FtsH protease activity modulator HflK low > 63
Dechlorosoma suillum PS 0.32 Dsui_2937 NAD/NADP transhydrogenase beta subunit 0.32 Dsui_3135 HflK protein — —

Not shown: 14 genomes with orthologs for ECD_01571 only; 4 genomes with orthologs for ECD_04041 only