Conservation of cofitness between ECD_00216 and ECD_03063 in Escherichia coli BL21

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00216 acyl coenzyme A dehydrogenase 1.0 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03418 Acyl-coenzyme A dehydrogenase 1.00 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 73
Escherichia coli BW25113 1.00 b0221 yafH putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) 0.99 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_07885 fadE acyl-CoA dehydrogenase FadE 0.99 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia coli ECRC62 1.00 BNILDI_00350 fadE acyl-CoA dehydrogenase FadE 0.99 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Escherichia coli ECOR27 1.00 NOLOHH_02155 fadE acyl-CoA dehydrogenase FadE 0.99 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.54 27
Escherichia fergusonii Becca 1.00 EFB2_03796 Acyl-coenzyme A dehydrogenase 1.00 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 86
Escherichia coli ECRC101 1.00 MCAODC_00300 fadE acyl-CoA dehydrogenase FadE 0.99 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia coli ECRC98 1.00 JDDGAC_13405 fadE acyl-CoA dehydrogenase FadE 0.99 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 86
Escherichia coli ECRC99 1.00 KEDOAH_18375 fadE acyl-CoA dehydrogenase FadE 0.99 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Escherichia coli ECRC100 1.00 OKFHMN_09780 fadE acyl-CoA dehydrogenase FadE 0.99 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 80
Escherichia coli ECRC102 1.00 NIAGMN_07640 fadE acyl-CoA dehydrogenase FadE 0.99 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Escherichia coli Nissle 1917 0.99 ECOLIN_RS01745 acyl-CoA dehydrogenase FadE 1.00 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4100 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.97 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS05470 acyl-CoA dehydrogenase 0.84 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 92
Enterobacter sp. TBS_079 0.93 MPMX20_00910 Acyl-coenzyme A dehydrogenase 0.92 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2668 Acyl-CoA dehydrogenases 0.92 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 76
Serratia liquefaciens MT49 0.83 IAI46_04335 acyl-CoA dehydrogenase 0.77 IAI46_22450 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 86
Pantoea sp. MT58 0.81 IAI47_15195 acyl-CoA dehydrogenase 0.82 IAI47_17165 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 76
Pectobacterium carotovorum WPP14 0.79 HER17_RS04640 acyl-CoA dehydrogenase FadE 0.79 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Rahnella sp. WP5 0.79 EX31_RS21025 acyl-CoA dehydrogenase 0.78 EX31_RS12420 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 89
Dickeya dadantii 3937 0.75 DDA3937_RS16595 acyl-CoA dehydrogenase FadE 0.76 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS17755 acyl-CoA dehydrogenase 0.77 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS16665 acyl-CoA dehydrogenase FadE 0.77 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.57 20
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_11370 acyl-CoA dehydrogenase 0.61 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC
Shewanella sp. ANA-3 0.66 Shewana3_2323 fadE acyl-CoA dehydrogenase (RefSeq) 0.52 Shewana3_0676 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Shewanella loihica PV-4 0.66 Shew_2108 fadE acyl-CoA dehydrogenase (RefSeq) 0.59 Shew_3307 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Shewanella oneidensis MR-1 0.66 SO2536 oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) 0.52 SO3957 conserved hypothetical protein (NCBI ptt file)
Shewanella amazonensis SB2B 0.65 Sama_1870 fadE acyl-CoA dehydrogenase (RefSeq) 0.53 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
Alteromonas macleodii MIT1002 0.63 MIT1002_02222 Acyl-coenzyme A dehydrogenase 0.46 MIT1002_00831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1781 Acyl-CoA dehydrogenases 0.53 B158DRAFT_2084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
Dechlorosoma suillum PS 0.53 Dsui_0326 acyl-CoA dehydrogenase 0.37 Dsui_1381 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 51
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS18970 acyl-CoA dehydrogenase 0.44 ABZR86_RS19835 HAD family hydrolase
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_01400 fadE acyl-CoA dehydrogenase 0.39 OKGIIK_02285 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS05405 acyl-CoA dehydrogenase 0.40 LRK54_RS12895 HAD hydrolase family protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1628 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal 0.42 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI low > 86
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1628 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal 0.42 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI low > 86
Rhodanobacter denitrificans MT42 0.50 LRK55_RS05180 acyl-CoA dehydrogenase 0.40 LRK55_RS12595 HAD hydrolase family protein
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1577.1 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.35 Xcc-8004.1666.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_05133 acyl-CoA dehydrogenase 0.41 H281DRAFT_01923 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) low > 103
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS08290 acyl-CoA dehydrogenase 0.39 BPHYT_RS02925 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Pseudomonas putida KT2440 0.49 PP_1893 medium-long chain acyl-CoA dehydrogenase 0.43 PP_0956 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS07825 acyl-CoA dehydrogenase 0.39 ABZR87_RS07080 HAD family hydrolase low > 80
Pseudomonas sp. RS175 0.49 PFR28_03037 Acyl-coenzyme A dehydrogenase 0.43 PFR28_00177 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Ralstonia solanacearum PSI07 0.49 RPSI07_RS21335 acyl-CoA dehydrogenase 0.38 RPSI07_RS22110 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 81
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_01500 acyl-CoA dehydrogenase 0.44 AO353_05160 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Ralstonia solanacearum GMI1000 0.48 RS_RS02685 acyl-CoA dehydrogenase 0.41 RS_RS02040 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 80
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_5924 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.42 Pf6N2E2_3263 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS09195 acyl-CoA dehydrogenase 0.44 PFLU_RS04420 HAD family hydrolase
Pseudomonas fluorescens SBW25 0.48 PFLU_RS09195 acyl-CoA dehydrogenase 0.44 PFLU_RS04420 HAD family hydrolase
Paraburkholderia graminis OAS925 0.48 ABIE53_002416 acyl-CoA dehydrogenase 0.41 ABIE53_000722 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) low > 113
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_2077 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.43 PfGW456L13_5010 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)
Lysobacter sp. OAE881 0.48 ABIE51_RS16325 acyl-CoA dehydrogenase 0.35 ABIE51_RS15935 HAD hydrolase family protein
Pseudomonas simiae WCS417 0.48 PS417_09185 acyl-CoA dehydrogenase 0.44 PS417_04365 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 88
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_20030 acyl-CoA dehydrogenase 0.42 AO356_07015 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS18135 acyl-CoA dehydrogenase 0.39 HSERO_RS19835 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 78
Ralstonia solanacearum UW163 0.47 UW163_RS01725 acyl-CoA dehydrogenase 0.35 UW163_RS02390 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS22955 acyl-CoA dehydrogenase 0.43 QEN71_RS01775 HAD family hydrolase
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS11865 acyl-CoA dehydrogenase 0.35 RALBFv3_RS11190 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 76
Pseudomonas stutzeri RCH2 0.47 Psest_2728 Acyl-CoA dehydrogenases 0.42 Psest_3309 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
Pseudomonas sp. S08-1 0.47 OH686_22645 Acyl-CoA dehydrogenase 0.40 OH686_08520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_480 Butyryl-CoA dehydrogenase (EC 1.3.99.2) 0.44 Pf1N1B4_1076 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)
Castellaniella sp019104865 MT123 0.45 ABCV34_RS04935 acyl-CoA dehydrogenase 0.37 ABCV34_RS14365 HAD hydrolase family protein
Acinetobacter radioresistens SK82 0.43 MPMX26_02120 Acyl-coenzyme A dehydrogenase 0.37 MPMX26_01968 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Marinobacter adhaerens HP15 0.43 HP15_3375 acyl-coenzyme A dehydrogenase 0.45 HP15_2438 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Not shown: 0 genomes with orthologs for ECD_00216 only; 18 genomes with orthologs for ECD_03063 only