Conservation of cofitness between ECD_00435 and ECD_00443 in Escherichia coli BL21

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00435 copper transporter 1.0 ECD_00443 DnaK co-chaperone, thioredoxin-like protein 0.73 10
Escherichia coli BW25113 1.00 b0484 copA copper transporter (NCBI) 1.00 b0492 ybbN putative thioredoxin-like protein (VIMSS) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_01015 copA copper-exporting P-type ATPase CopA 1.00 NOLOHH_00975 cnoX chaperedoxin low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03190 Copper-exporting P-type ATPase 1.00 OHPLBJKB_03182 putative protein YbbN low > 73
Escherichia coli ECOR38 0.99 HEPCGN_06710 copA copper-exporting P-type ATPase CopA 1.00 HEPCGN_06615 cnoX chaperedoxin low > 87
Escherichia coli ECRC62 0.99 BNILDI_22435 copA copper-exporting P-type ATPase CopA 0.99 BNILDI_22395 cnoX chaperedoxin low > 75
Escherichia coli ECRC99 0.99 KEDOAH_19895 copA copper-exporting P-type ATPase CopA 1.00 KEDOAH_19985 cnoX chaperedoxin
Escherichia coli ECRC100 0.99 OKFHMN_08075 copA copper-exporting P-type ATPase CopA 1.00 OKFHMN_07985 cnoX chaperedoxin low > 80
Escherichia coli ECRC101 0.99 MCAODC_27295 copA copper-exporting P-type ATPase CopA 1.00 MCAODC_27200 cnoX chaperedoxin low > 87
Escherichia coli ECRC98 0.99 JDDGAC_11720 copA copper-exporting P-type ATPase CopA 1.00 JDDGAC_11630 cnoX chaperedoxin low > 86
Escherichia coli ECRC102 0.99 NIAGMN_06125 copA copper-exporting P-type ATPase CopA 1.00 NIAGMN_06035 cnoX chaperedoxin
Escherichia fergusonii Becca 0.99 EFB2_03575 Copper-exporting P-type ATPase 1.00 EFB2_03563 Chaperedoxin 0.28 44
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02865 copper-exporting P-type ATPase CopA 0.99 ECOLIN_RS02910 chaperedoxin low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF4404 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.95 GFF4410 FIG000875: Thioredoxin domain-containing protein EC-YbbN low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2474 copper-(or silver)-translocating P-type ATPase 0.91 EX28DRAFT_2467 Thioredoxin domain-containing protein low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS06905 Cu+ exporting ATPase 0.81 BWI76_RS06935 co-chaperone YbbN low > 92
Enterobacter sp. TBS_079 0.87 MPMX20_01084 Copper-exporting P-type ATPase 0.88 MPMX20_01090 Chaperedoxin low > 85
Serratia liquefaciens MT49 0.74 IAI46_05310 copper-exporting P-type ATPase CopA 0.75 IAI46_05335 co-chaperone YbbN low > 86
Pectobacterium carotovorum WPP14 0.72 HER17_RS15625 copper-exporting P-type ATPase CopA 0.73 HER17_RS15510 co-chaperone YbbN low > 75
Dickeya dianthicola ME23 0.71 DZA65_RS06225 copper-exporting P-type ATPase CopA 0.73 DZA65_RS06345 co-chaperone YbbN low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS05890 copper-exporting P-type ATPase CopA 0.71 HGI48_RS06000 co-chaperone YbbN low > 71
Dickeya dadantii 3937 0.70 DDA3937_RS05845 copper-exporting P-type ATPase CopA 0.70 DDA3937_RS05950 co-chaperone YbbN low > 74
Rahnella sp. WP5 0.67 EX31_RS22575 copper-exporting P-type ATPase CopA 0.74 EX31_RS22595 co-chaperone YbbN low > 89
Pantoea sp. MT58 0.67 IAI47_14400 copper-exporting P-type ATPase CopA 0.79 IAI47_14380 co-chaperone YbbN low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS15300 copA copper-exporting P-type ATPase CopA 0.77 LU632_RS15275 co-chaperone YbbN low > 74
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_11300 copper-exporting P-type ATPase A 0.43 CSW01_04995 co-chaperone YbbN low > 62
Marinobacter adhaerens HP15 0.46 HP15_3546 copper-translocating P-type ATPase 0.28 HP15_3051 thioredoxin domain-containing protein low > 73
Alteromonas macleodii MIT1002 0.46 MIT1002_00284 Copper-exporting P-type ATPase A 0.42 MIT1002_00529 Thioredoxin low > 70
Shewanella sp. ANA-3 0.45 Shewana3_4145 copper-translocating P-type ATPase (RefSeq) 0.38 Shewana3_2442 thioredoxin domain-containing protein (RefSeq) low > 73
Shewanella loihica PV-4 0.43 Shew_3818 copper-translocating P-type ATPase (RefSeq) 0.37 Shew_2231 thioredoxin domain-containing protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.42 SO1689 cation transport ATPase, E1-E2 family (NCBI ptt file) 0.39 SO2017 hypothetical thioredoxin-like protein (NCBI ptt file) low > 76
Agrobacterium fabrum C58 0.37 Atu1195 heavy-metal transporting P-type ATPase 0.24 Atu3698 thioredoxin low > 89
Dinoroseobacter shibae DFL-12 0.36 Dshi_4065 heavy metal translocating P-type ATPase (RefSeq) 0.19 Dshi_0035 Thioredoxin domain (RefSeq)
Sinorhizobium meliloti 1021 0.34 SM_b21578 copper-transporting P-type ATPase 0.19 SMc03801 thioredoxin protein low > 103
Bosea sp. OAE506 0.34 ABIE41_RS14220 heavy metal translocating P-type ATPase 0.21 ABIE41_RS08290 thioredoxin low > 77
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_0422 copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase 0.21 Ga0059261_2170 Thioredoxin domain-containing protein low > 68
Phaeobacter inhibens DSM 17395 0.33 PGA1_c02520 copper-transporting P-type ATPase ActP 0.18 PGA1_c33230 thioredoxin-like protein low > 62
Pseudomonas sp. S08-1 0.33 OH686_07395 copper-translocating P-type ATPase 0.29 OH686_15675 thioredoxin low > 80
Azospirillum sp. SherDot2 0.32 MPMX19_06430 Copper-exporting P-type ATPase 0.23 MPMX19_01906 Chaperedoxin low > 112
Acidovorax sp. GW101-3H11 0.32 Ac3H11_4218 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.20 Ac3H11_677 FIG000875: Thioredoxin domain-containing protein EC-YbbN low > 79
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_06155 copper-transporting ATPase 0.31 AO353_06735 thioredoxin 0.38 45
Pseudomonas stutzeri RCH2 0.31 Psest_0738 copper-(or silver)-translocating P-type ATPase 0.30 Psest_3559 thioredoxin low > 67
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3487 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.29 Pf6N2E2_4915 FIG000875: Thioredoxin domain-containing protein EC-YbbN low > 103
Pseudomonas putida KT2440 0.31 PP_0586 cadmium translocating P-type ATPase 0.30 PP_0510 Thioredoxin low > 96
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_24 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.30 PfGW456L13_1308 FIG000875: Thioredoxin domain-containing protein EC-YbbN low > 87
Pseudomonas sp. RS175 0.31 PFR28_05244 Copper-exporting P-type ATPase 0.30 PFR28_03953 Chaperedoxin low > 88
Shewanella amazonensis SB2B 0.31 Sama_1786 copper-translocating P-type ATPase (RefSeq) 0.31 Sama_1314 putative thioredoxin-like protein (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_08065 copper-transporting ATPase 0.28 AO356_14910 thioredoxin low > 104
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS17330 heavy metal translocating P-type ATPase 0.22 QEN71_RS02720 thioredoxin low > 153
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_1262 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.30 Pf1N1B4_2645 FIG000875: Thioredoxin domain-containing protein EC-YbbN low > 87
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS04235 heavy metal translocating P-type ATPase 0.19 ABZR87_RS09195 thioredoxin low > 80
Lysobacter sp. OAE881 0.30 ABIE51_RS09555 heavy metal translocating P-type ATPase 0.20 ABIE51_RS06710 thioredoxin low > 62
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0654 Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.30 Psyr_4466 Thioredoxin low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0654 Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.30 Psyr_4466 Thioredoxin low > 86
Pseudomonas simiae WCS417 0.30 PS417_03160 metal ABC transporter ATPase 0.30 PS417_25285 thioredoxin low > 88
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS34125 heavy metal translocating P-type ATPase 0.21 BPHYT_RS15985 thioredoxin low > 109
Ralstonia solanacearum GMI1000 0.29 RS_RS16775 copper-translocating P-type ATPase 0.19 RS_RS03915 thioredoxin low > 80
Pseudomonas fluorescens SBW25 0.29 PFLU_RS03240 copper-translocating P-type ATPase 0.31 PFLU_RS26920 thioredoxin low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS03240 copper-translocating P-type ATPase 0.31 PFLU_RS26920 thioredoxin low > 109
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_03512 Cu+-exporting ATPase 0.22 H281DRAFT_04133 thioredoxin low > 103
Ralstonia solanacearum PSI07 0.29 RPSI07_RS08310 copper-translocating P-type ATPase 0.20 RPSI07_RS20095 thioredoxin low > 81
Magnetospirillum magneticum AMB-1 0.29 AMB_RS09145 copper-translocating P-type ATPase 0.21 AMB_RS00045 thioredoxin
Paraburkholderia graminis OAS925 0.28 ABIE53_004745 Cu+-exporting ATPase 0.21 ABIE53_003370 putative thioredoxin low > 113
Rhodospirillum rubrum S1H 0.27 Rru_A1894 heavy metal translocating P-type ATPase (NCBI) 0.19 Rru_A3711 Thioredoxin-related (NCBI) low > 58
Variovorax sp. OAS795 0.25 ABID97_RS02825 heavy metal translocating P-type ATPase 0.18 ABID97_RS01710 tetratricopeptide repeat protein low > 91
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_01473 E1-E2 cation pump ATPase fixI 0.19 CCNA_00109 thioredoxin low > 67
Caulobacter crescentus NA1000 0.18 CCNA_01473 E1-E2 cation pump ATPase fixI 0.19 CCNA_00109 thioredoxin low > 66
Azospirillum brasilense Sp245 0.17 AZOBR_RS01150 ATPase P 0.21 AZOBR_RS00145 thioredoxin

Not shown: 20 genomes with orthologs for ECD_00435 only; 13 genomes with orthologs for ECD_00443 only