Conservation of cofitness between Dsui_0707 and Dsui_2149 in Dechlorosoma suillum PS

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_0707 protein RecA 1.0 Dsui_2149 DNA helicase, Rad3 0.78 11
Rhodanobacter denitrificans FW104-10B01 0.81 LRK54_RS14980 recombinase RecA 0.42 LRK54_RS12765 ATP-dependent DNA helicase low > 59
Rhodanobacter denitrificans MT42 0.81 LRK55_RS14695 recombinase RecA 0.42 LRK55_RS12465 ATP-dependent DNA helicase low > 63
Rhodanobacter sp. FW510-T8 0.81 OKGIIK_03740 recA recombinase RecA 0.42 OKGIIK_02195 dinG helicase low > 52
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS02335 recombinase RecA 0.55 QEN71_RS06060 ATP-dependent DNA helicase — —
Paraburkholderia graminis OAS925 0.79 ABIE53_003448 recombination protein RecA 0.55 ABIE53_002724 ATP-dependent DNA helicase DinG low > 113
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS16360 recombinase RecA 0.56 BPHYT_RS12495 helicase — —
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_04208 RecA protein 0.56 H281DRAFT_00533 ATP-dependent DNA helicase DinG low > 103
Kangiella aquimarina DSM 16071 0.78 B158DRAFT_1531 protein RecA 0.42 B158DRAFT_2492 Rad3-related DNA helicases low > 40
Dyella japonica UNC79MFTsu3.2 0.78 ABZR86_RS00660 recombinase RecA 0.42 ABZR86_RS19750 ATP-dependent DNA helicase low > 74
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS03080 recombinase RecA 0.58 RR42_RS07580 helicase low > 128
Castellaniella sp019104865 MT123 0.77 ABCV34_RS04460 recombinase RecA 0.46 ABCV34_RS01875 ATP-dependent DNA helicase low > 48
Alteromonas macleodii MIT1002 0.77 MIT1002_00955 Recombinase A 0.39 MIT1002_02593 putative ATP-dependent helicase DinG low > 70
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS07965 recombinase RecA 0.56 ABZR87_RS13325 ATP-dependent DNA helicase low > 80
Ralstonia solanacearum UW163 0.75 UW163_RS01625 recombinase RecA 0.56 UW163_RS14840 ATP-dependent DNA helicase — —
Ralstonia solanacearum PSI07 0.75 RPSI07_RS21260 recombinase RecA 0.56 RPSI07_RS15960 ATP-dependent DNA helicase — —
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS12010 recombinase RecA 0.56 RALBFv3_RS01530 ATP-dependent DNA helicase low > 76
Ralstonia solanacearum GMI1000 0.75 RS_RS02760 DNA recombination/repair protein RecA 0.56 RS_RS08195 ATP-dependent DNA helicase — —
Variovorax sp. SCN45 0.75 GFF5390 RecA protein 0.36 GFF986 DinG family ATP-dependent helicase YoaA low > 127
Variovorax sp. OAS795 0.75 ABID97_RS02275 recombinase RecA 0.36 ABID97_RS14180 ATP-dependent DNA helicase low > 91
Pseudomonas stutzeri RCH2 0.75 Psest_2872 protein RecA 0.15 Psest_2857 Rad3-related DNA helicases low > 67
Acidovorax sp. GW101-3H11 0.75 Ac3H11_1255 RecA protein 0.36 Ac3H11_2460 DinG family ATP-dependent helicase YoaA — —
Pseudomonas fluorescens SBW25 0.74 PFLU_RS05885 recombinase RecA 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS05885 recombinase RecA 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas simiae WCS417 0.74 PS417_05815 recombinase RecA 0.15 PS417_06510 ATP-dependent DNA helicase DinG low > 88
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.3111.1 RecA protein 0.37 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA — —
Lysobacter sp. OAE881 0.74 ABIE51_RS07800 recombinase RecA 0.36 ABIE51_RS05195 ATP-dependent DNA helicase low > 62
Shewanella oneidensis MR-1 0.74 SO3430 recA recA protein (NCBI ptt file) 0.34 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) low > 76
Herbaspirillum seropedicae SmR1 0.74 HSERO_RS03270 protein RecA 0.58 HSERO_RS14855 helicase low > 78
Pseudomonas sp. S08-1 0.73 OH686_18205 protein RecA 0.16 OH686_04830 ATP-dependent helicase DinG/Rad3 low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF2500 RecA protein 0.32 GFF4872 DinG family ATP-dependent helicase YoaA low > 90
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3143 RecA protein 0.15 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 — —
Erwinia tracheiphila SCR3 0.73 LU632_RS15735 recA recombinase RecA 0.39 LU632_RS13150 ATP-dependent DNA helicase low > 74
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_16805 recombinase RecA 0.15 AO353_17020 ATP-dependent DNA helicase DinG low > 101
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4668 RecA protein 0.15 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 low > 87
Shewanella sp. ANA-3 0.73 Shewana3_1126 recA recombinase A (RefSeq) 0.33 Shewana3_1859 helicase c2 (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4693 RecA protein 0.40 GFF2823 DinG family ATP-dependent helicase YoaA — —
Pectobacterium carotovorum WPP14 0.73 HER17_RS05045 recombinase RecA 0.40 HER17_RS11290 ATP-dependent DNA helicase low > 75
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_02875 DNA recombination/repair protein RecA 0.40 CSW01_09930 ATP-dependent DNA helicase low > 62
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_05670 recombinase RecA 0.15 AO356_05425 ATP-dependent DNA helicase DinG low > 104
Escherichia coli BW25113 0.73 b2699 recA recombinase A (NCBI) 0.40 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01035 Protein RecA 0.41 OHPLBJKB_01925 putative ATP-dependent helicase DinG low > 73
Escherichia coli ECOR27 0.73 NOLOHH_12545 recA recombinase RecA 0.41 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA — —
Pseudomonas sp. RS175 0.73 PFR28_00472 Protein RecA 0.15 PFR28_00520 ATP-dependent DNA helicase DinG low > 88
Escherichia coli ECRC101 0.73 MCAODC_11230 recA recombinase RecA 0.41 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC99 0.73 KEDOAH_07430 recA recombinase RecA 0.41 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC102 0.73 NIAGMN_18475 recA recombinase RecA 0.41 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC98 0.73 JDDGAC_24370 recA recombinase RecA 0.41 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA — —
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2993 RecA protein 0.15 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 — —
Klebsiella michiganensis M5al 0.73 BWI76_RS22180 recombinase RecA 0.40 BWI76_RS17815 ATP-dependent helicase — —
Dickeya dadantii 3937 0.73 DDA3937_RS16245 recombinase RecA 0.40 DDA3937_RS11240 ATP-dependent DNA helicase low > 74
Escherichia fergusonii Becca 0.73 EFB2_01225 Protein RecA 0.41 EFB2_02192 putative ATP-dependent DNA helicase YoaA low > 86
Escherichia coli ECOR38 0.73 HEPCGN_19900 recA recombinase RecA 0.41 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA low > 85
Escherichia coli BL21 0.73 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor 0.41 ECD_01778 putative ATP-dependent helicase, DinG family — —
Escherichia coli ECRC62 0.73 BNILDI_11105 recA recombinase RecA 0.41 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS15060 recombinase RecA 0.41 ECOLIN_RS10055 ATP-dependent DNA helicase — —
Escherichia coli ECRC101 0.73 OKFHMN_20705 recA recombinase RecA 0.41 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA — —
Pantoea sp. MT58 0.72 IAI47_04300 recombinase RecA 0.40 IAI47_08820 ATP-dependent DNA helicase low > 76
Rahnella sp. WP5 0.72 EX31_RS07800 recombinase RecA 0.39 EX31_RS10615 ATP-dependent DNA helicase low > 89
Dickeya dianthicola ME23 0.72 DZA65_RS17450 recombinase RecA 0.40 DZA65_RS11620 ATP-dependent DNA helicase — —
Dickeya dianthicola 67-19 0.72 HGI48_RS16355 recombinase RecA 0.40 HGI48_RS11275 ATP-dependent DNA helicase low > 71
Enterobacter sp. TBS_079 0.72 MPMX20_03580 Protein RecA 0.40 MPMX20_02714 putative ATP-dependent DNA helicase YoaA low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2785 protein RecA 0.40 EX28DRAFT_0750 Rad3-related DNA helicases — —
Serratia liquefaciens MT49 0.72 IAI46_03840 recombinase RecA 0.39 IAI46_14550 ATP-dependent DNA helicase low > 86
Shewanella amazonensis SB2B 0.71 Sama_1046 recA recombinase A (RefSeq) 0.34 Sama_1940 ATP-dependent helicase DinG (RefSeq) low > 62
Shewanella loihica PV-4 0.71 Shew_1215 recA recombinase A (RefSeq) 0.34 Shew_2196 helicase c2 (RefSeq) low > 60

Not shown: 35 genomes with orthologs for Dsui_0707 only; 3 genomes with orthologs for Dsui_2149 only