Conservation of cofitness between DZA65_RS19385 and DZA65_RS17345 in Dickeya dianthicola ME23

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.0 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase 0.85 10
Dickeya dianthicola 67-19 1.00 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.99 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase 0.62 68
Dickeya dadantii 3937 0.95 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.98 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase low > 74
Pectobacterium carotovorum WPP14 0.93 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.88 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.97 6
Rahnella sp. WP5 0.91 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.79 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.96 14
Klebsiella michiganensis M5al 0.89 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.74 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.45 79
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.76 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) — —
Escherichia coli BW25113 0.88 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.75 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.82 62
Serratia liquefaciens MT49 0.88 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.80 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.64 59
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.75 OHPLBJKB_01109 P-protein low > 73
Escherichia coli BL21 0.88 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.75 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.67 23
Escherichia coli ECRC62 0.88 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.75 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.77 69
Escherichia coli ECRC100 0.88 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.75 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.82 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.72 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Escherichia coli ECRC101 0.88 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.75 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.82 29
Escherichia coli ECRC99 0.88 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.75 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECOR27 0.88 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.75 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase low > 75
Escherichia coli ECRC102 0.88 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.75 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECOR38 0.88 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.75 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.82 63
Escherichia coli ECRC98 0.88 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.75 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.88 16
Escherichia fergusonii Becca 0.88 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.75 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli Nissle 1917 0.88 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.75 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase 0.70 46
Enterobacter sp. TBS_079 0.85 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.76 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.77 58
Pantoea sp. MT58 0.84 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.74 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.86 43
Erwinia tracheiphila SCR3 0.84 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.72 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase low > 74
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.56 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_0615 carbamoyl-phosphate synthase, small subunit 0.34 B158DRAFT_1385 Prephenate dehydratase — —
Alteromonas macleodii MIT1002 0.72 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.56 MIT1002_01316 P-protein 0.93 48
Pseudomonas stutzeri RCH2 0.71 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.20 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_05635 carbamoyl phosphate synthase small subunit 0.21 AO353_02070 prephenate dehydratase — —
Pseudomonas sp. S08-1 0.71 OH686_17075 Carbamoyl-phosphate synthase small chain 0.21 OH686_20870 Chorismate mutase I / Prephenate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.21 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.21 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_07485 carbamoyl phosphate synthase small subunit 0.21 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.21 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.21 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.21 Psyr_3645 prephenate dehydratase — —
Pseudomonas putida KT2440 0.70 PP_4724 Carbamoyl-phosphate synthase small chain 0.21 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas simiae WCS417 0.70 PS417_24045 carbamoyl phosphate synthase small subunit 0.21 PS417_08125 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas sp. RS175 0.70 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.21 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens SBW25 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.21 PFLU_RS08095 prephenate dehydratase — —
Marinobacter adhaerens HP15 0.70 HP15_3078 carbamoyl-phosphate synthase small chain 0.21 HP15_1362 chorismate mutase / prephenate dehydratase — —
Dechlorosoma suillum PS 0.68 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.18 Dsui_1940 chorismate mutase, clade 2 — —
Acinetobacter radioresistens SK82 0.68 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.21 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase low > 36
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.21 HSERO_RS18430 chorismate mutase — —
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.22 RR42_RS04460 chorismate mutase — —
Rhodanobacter denitrificans MT42 0.65 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.20 LRK55_RS00135 prephenate dehydratase — —
Lysobacter sp. OAE881 0.65 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.19 ABIE51_RS12145 prephenate dehydratase 0.58 21
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.19 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.20 LRK54_RS00395 prephenate dehydratase — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.19 ABZR87_RS09450 prephenate dehydratase — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.19 ABZR86_RS02225 prephenate dehydratase — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.20 RPSI07_RS19710 prephenate dehydratase — —
Acidovorax sp. GW101-3H11 0.64 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.20 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Ralstonia solanacearum UW163 0.64 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.20 UW163_RS16050 chorismate mutase — —
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.23 QEN71_RS04070 prephenate dehydratase — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.20 RALBFv3_RS13760 chorismate mutase — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.19 OKGIIK_06915 pheA prephenate dehydratase low > 52
Ralstonia solanacearum GMI1000 0.63 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.19 RS_RS04495 prephenate dehydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.18 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Variovorax sp. SCN45 0.63 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.18 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Variovorax sp. OAS795 0.63 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.18 ABID97_RS09515 prephenate dehydratase — —
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit 0.22 H281DRAFT_03925 chorismate mutase — —
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.22 BPHYT_RS14910 chorismate mutase 0.58 49
Paraburkholderia graminis OAS925 0.62 ABIE53_003005 carbamoyl-phosphate synthase small subunit 0.22 ABIE53_003157 chorismate mutase/prephenate dehydratase — —
Castellaniella sp019104865 MT123 0.59 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.19 ABCV34_RS07110 prephenate dehydratase — —
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU3113 carA carbamoyl-phosphate synthase, small subunit (TIGR) 0.21 DVU0462 chorismate mutase/prephenate dehydratase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2370 carbamoyl phosphate synthase small subunit (RefSeq) 0.20 DvMF_1749 prephenate dehydratase (RefSeq) 0.69 27

Not shown: 35 genomes with orthologs for DZA65_RS19385 only; 0 genomes with orthologs for DZA65_RS17345 only