Conservation of cofitness between CSW01_02485 and CSW01_16995 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02485 YqgE/AlgH family protein 1.0 CSW01_16995 MFS transporter 0.39 16
Dickeya dadantii 3937 0.57 DDA3937_RS18565 YqgE/AlgH family protein 0.18 DDA3937_RS09140 OFA family MFS transporter low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS18500 YqgE/AlgH family protein 0.17 HGI48_RS09180 OFA family MFS transporter low > 71
Dickeya dianthicola ME23 0.56 DZA65_RS19635 YqgE/AlgH family protein 0.17 DZA65_RS09480 OFA family MFS transporter low > 75
Pectobacterium carotovorum WPP14 0.55 HER17_RS02630 YqgE/AlgH family protein 0.20 HER17_RS11560 OFA family MFS transporter low > 75
Rahnella sp. WP5 0.55 EX31_RS02670 YqgE/AlgH family protein 0.19 EX31_RS20650 OFA family MFS transporter low > 89
Serratia liquefaciens MT49 0.55 IAI46_21395 YqgE/AlgH family protein 0.22 IAI46_18210 OFA family MFS transporter 0.38 40
Pantoea sp. MT58 0.54 IAI47_03610 YqgE/AlgH family protein 0.19 IAI47_05625 MFS transporter low > 76
Klebsiella michiganensis M5al 0.53 BWI76_RS24080 DUF179 domain-containing protein 0.18 BWI76_RS26905 oxalate/formate antiport family MFS transporter low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF3050 UPF0301 protein YqgE 0.19 GFF2468 Putative transmembrane transport protein low > 78
Dechlorosoma suillum PS 0.52 Dsui_0593 putative transcriptional regulator 0.07 Dsui_1896 arabinose efflux permease family protein low > 51
Escherichia coli ECRC101 0.51 MCAODC_09790 yqgE YqgE/AlgH family protein 0.19 MCAODC_06565 yhjX Uncharacterized MFS-type transporter YhjX low > 87
Escherichia coli ECRC100 0.51 OKFHMN_19270 yqgE YqgE/AlgH family protein 0.19 OKFHMN_16050 yhjX Uncharacterized MFS-type transporter YhjX low > 80
Escherichia coli ECRC98 0.51 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.19 JDDGAC_19680 yhjX Uncharacterized MFS-type transporter YhjX low > 86
Escherichia coli ECRC102 0.51 NIAGMN_17035 yqgE YqgE/AlgH family protein 0.19 NIAGMN_13810 yhjX Uncharacterized MFS-type transporter YhjX — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00770 hypothetical protein 0.18 OHPLBJKB_00159 putative MFS-type transporter YhjX low > 73
Escherichia coli ECOR27 0.51 NOLOHH_11140 yqgE YqgE/AlgH family protein 0.18 NOLOHH_07995 yhjX Uncharacterized MFS-type transporter YhjX low > 75
Escherichia coli ECRC62 0.51 BNILDI_09720 yqgE YqgE/AlgH family protein 0.18 BNILDI_03550 yhjX Uncharacterized MFS-type transporter YhjX low > 75
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS12610 DUF179 domain-containing protein 0.10 RALBFv3_RS18765 MFS transporter low > 76
Escherichia fergusonii Becca 0.51 EFB2_00954 hypothetical protein 0.19 EFB2_00260 putative MFS-type transporter YhjX low > 86
Ralstonia solanacearum UW163 0.51 UW163_RS00955 DUF179 domain-containing protein 0.10 UW163_RS20365 MFS transporter — —
Escherichia coli BW25113 0.51 b2948 yqgE orf, hypothetical protein (VIMSS) 0.18 b3547 yhjX predicted transporter (NCBI) low > 76
Escherichia coli BL21 0.51 ECD_02778 uncharacterized protein 0.19 ECD_03397 pyruvate-inducible inner membrane protein, putative transporter low > 61
Escherichia coli ECOR38 0.51 HEPCGN_18575 yqgE YqgE/AlgH family protein 0.19 HEPCGN_14940 yhjX Uncharacterized MFS-type transporter YhjX low > 87
Escherichia coli Nissle 1917 0.51 ECOLIN_RS16400 YqgE/AlgH family protein 0.19 ECOLIN_RS20300 MFS transporter low > 55
Escherichia coli ECRC99 0.51 KEDOAH_08870 algH YqgE/AlgH family protein 0.19 KEDOAH_12100 yhjX Uncharacterized MFS-type transporter YhjX — —
Ralstonia solanacearum GMI1000 0.51 RS_RS03395 YqgE/AlgH family protein 0.11 RS_RS22185 MFS transporter — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS20650 YqgE/AlgH family protein 0.11 RPSI07_RS04830 MFS transporter low > 81
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS02315 transcriptional regulator 0.10 HSERO_RS07415 MFS transporter low > 78
Enterobacter asburiae PDN3 0.49 EX28DRAFT_2986 Putative transcriptional regulator 0.19 EX28DRAFT_3807 oxalate/formate antiporter family transporter low > 76
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS15875 hypothetical protein 0.13 RR42_RS31335 spermidine/putrescine ABC transporter substrate-binding protein low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF648 UPF0301 protein YqgE 0.09 GFF2749 Probable oxalate/formate antiporter low > 90
Variovorax sp. SCN45 0.49 GFF2157 UPF0301 protein YqgE 0.11 GFF5629 Uncharacterized MFS-type transporter low > 127
Enterobacter sp. TBS_079 0.49 MPMX20_03806 hypothetical protein 0.19 MPMX20_00187 putative MFS-type transporter YhjX low > 85
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS08610 YqgE/AlgH family protein 0.11 ABZR87_RS19700 OFA family MFS transporter low > 80
Paraburkholderia graminis OAS925 0.48 ABIE53_001128 putative transcriptional regulator 0.13 ABIE53_005078 OFA family oxalate/formate antiporter-like MFS transporter low > 113
Acidovorax sp. GW101-3H11 0.48 Ac3H11_3981 UPF0301 protein YqgE 0.09 Ac3H11_2770 Major facilitator superfamily MFS_1 low > 79
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04814 putative transcriptional regulator 0.15 H281DRAFT_03003 Cyanate permease low > 103
Marinobacter adhaerens HP15 0.48 HP15_3510 transcriptional regulator 0.08 HP15_28 major facilitator superfamily MFS_1 low > 73
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS04220 hypothetical protein 0.14 BPHYT_RS29930 MFS transporter low > 109
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS10380 YqgE/AlgH family protein 0.07 ABZR86_RS15325 MFS transporter — —
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS25795 YqgE/AlgH family protein 0.14 QEN71_RS20385 OFA family MFS transporter 0.63 106
Castellaniella sp019104865 MT123 0.46 ABCV34_RS10730 YqgE/AlgH family protein 0.13 ABCV34_RS00230 OFA family MFS transporter low > 48
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_11085 algH YqgE/AlgH family protein 0.07 OKGIIK_15055 MFS transporter low > 52
Pseudomonas sp. S08-1 0.43 OH686_10925 UPF0301 protein YqgE 0.08 OH686_04930 Uncharacterized MFS-type transporter low > 80
Lysobacter sp. OAE881 0.43 ABIE51_RS16025 YqgE/AlgH family protein 0.08 ABIE51_RS11165 MFS transporter low > 62
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1720.1 UPF0301 protein YqgE 0.12 Xcc-8004.2193.1 MFS permease low > 74
Azospirillum sp. SherDot2 0.42 MPMX19_01077 hypothetical protein 0.15 MPMX19_01625 Oxalate:formate antiporter low > 112
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_08120 hypothetical protein 0.11 AO353_12065 MFS transporter low > 101
Pseudomonas sp. DMC3 0.41 GFF201 hypothetical protein 0.11 GFF4100 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_2350 UPF0301 protein YqgE 0.11 Pf1N1B4_1628 MFS permease low > 87
Azospirillum brasilense Sp245 0.41 AZOBR_RS10525 hypothetical protein 0.16 AZOBR_RS07885 spermidine/putrescine ABC transporter substrate-binding protein low > 97
Pseudomonas sp. RS175 0.41 PFR28_04234 hypothetical protein 0.11 PFR28_04928 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_1019 UPF0301 protein YqgE 0.11 PfGW456L13_363 MFS permease low > 87
Magnetospirillum magneticum AMB-1 0.41 AMB_RS04505 YqgE/AlgH family protein 0.07 AMB_RS14535 MFS transporter low > 64
Bosea sp. OAE506 0.41 ABIE41_RS23005 YqgE/AlgH family protein 0.09 ABIE41_RS12045 MFS transporter low > 77
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_13465 hypothetical protein 0.11 AO356_09820 MFS transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_4609 UPF0301 protein YqgE 0.11 Pf6N2E2_3843 MFS permease low > 103
Pseudomonas putida KT2440 0.40 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.10 PP_0288 putative Oxalate/formate antiporter low > 96
Xanthobacter sp. DMC5 0.40 GFF1690 hypothetical protein 0.16 GFF3236 Oxalate:formate antiporter — —
Pseudomonas simiae WCS417 0.40 PS417_26685 hypothetical protein 0.11 PS417_01555 MFS transporter low > 88
Pseudomonas sp. BP01 0.40 JOY50_RS09715 YqgE/AlgH family protein 0.10 JOY50_RS25495 OFA family MFS transporter low > 84
Rhodopseudomonas palustris CGA009 0.40 TX73_004710 YqgE/AlgH family protein 0.15 TX73_010020 oxalate/formate MFS antiporter low > 86
Pseudomonas sp. SVBP6 0.39 COO64_RS13590 YqgE/AlgH family protein 0.11 COO64_RS00235 OFA family MFS transporter low > 93
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0485 Protein of unknown function DUF179 0.10 Psyr_4899 Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0485 Protein of unknown function DUF179 0.10 Psyr_4899 Major facilitator superfamily low > 86
Pseudomonas fluorescens SBW25 0.39 PFLU_RS28330 YqgE/AlgH family protein 0.11 PFLU_RS01600 OFA family MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS28330 YqgE/AlgH family protein 0.11 PFLU_RS01600 OFA family MFS transporter 0.19 13
Sinorhizobium meliloti 1021 0.38 SMc00019 hypothetical protein 0.12 SM_b20272 transporter protein low > 103
Rhizobium sp. OAE497 0.38 ABIE40_RS04185 YqgE/AlgH family protein 0.11 ABIE40_RS03715 MFS transporter low > 107
Acinetobacter radioresistens SK82 0.37 MPMX26_00238 hypothetical protein 0.07 MPMX26_02115 L-lactate transporter low > 36
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_4015 Putative transcriptional regulator 0.08 Ga0059261_4201 Arabinose efflux permease low > 68

Not shown: 33 genomes with orthologs for CSW01_02485 only; 2 genomes with orthologs for CSW01_16995 only