Conservation of cofitness between CSW01_01120 and CSW01_15330 in Vibrio cholerae E7946 ATCC 55056

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01120 orotate phosphoribosyltransferase 1.0 CSW01_15330 glycine dehydrogenase (decarboxylating) 0.78 8
Escherichia coli BL21 0.85 ECD_03499 orotate phosphoribosyltransferase 0.59 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex low > 61
Escherichia coli Nissle 1917 0.85 ECOLIN_RS20750 orotate phosphoribosyltransferase 0.59 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00060 Orotate phosphoribosyltransferase 0.59 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) low > 74
Escherichia coli ECRC62 0.85 BNILDI_04035 pyrE Orotate phosphoribosyltransferase 0.59 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase low > 75
Escherichia coli BW25113 0.85 b3642 pyrE orotate phosphoribosyltransferase (NCBI) 0.59 b2903 gcvP glycine dehydrogenase (NCBI) low > 76
Escherichia coli ECOR38 0.84 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase 0.59 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase low > 88
Klebsiella michiganensis M5al 0.84 BWI76_RS27385 orotate phosphoribosyltransferase 0.59 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) low > 92
Escherichia fergusonii Becca 0.84 EFB2_00171 Orotate phosphoribosyltransferase 0.59 EFB2_00999 Glycine dehydrogenase (decarboxylating) low > 86
Shewanella amazonensis SB2B 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) 0.58 Sama_2719 glycine dehydrogenase (RefSeq) 0.50 62
Klebsiella pneumoniae MKP103 0.84 KDGMDA_08050 Orotate phosphoribosyltransferase 0.59 KDGMDA_04370 aminomethyl-transferring glycine dehydrogenase low > 95
Shewanella loihica PV-4 0.84 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) 0.59 Shew_3062 glycine dehydrogenase (RefSeq) low > 60
Escherichia coli ECOR27 0.84 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase 0.59 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase low > 76
Escherichia coli ECRC101 0.84 MCAODC_06110 pyrE Orotate phosphoribosyltransferase 0.59 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase low > 87
Escherichia coli ECRC102 0.84 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase 0.59 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase low > 80
Escherichia coli ECRC100 0.84 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase 0.59 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase low > 79
Escherichia coli ECRC98 0.84 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase 0.59 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase low > 87
Escherichia coli ECRC99 0.84 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase 0.59 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.59 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.49 33
Dickeya dadantii 3937 0.83 DDA3937_RS20535 orotate phosphoribosyltransferase 0.58 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase low > 74
Shewanella sp. ANA-3 0.83 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) 0.58 Shewana3_3499 glycine dehydrogenase (RefSeq) low > 73
Enterobacter asburiae PDN3 0.83 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.59 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) — —
Enterobacter sp. TBS_079 0.83 MPMX20_00093 Orotate phosphoribosyltransferase 0.59 MPMX20_03762 Glycine dehydrogenase (decarboxylating) low > 85
Shewanella oneidensis MR-1 0.83 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) 0.58 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.82 HER17_RS20850 orotate phosphoribosyltransferase 0.58 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase low > 75
Erwinia amylovora T8 0.81 OLJFJH_05770 orotate phosphoribosyltransferase 0.59 OLJFJH_08785 aminomethyl-transferring glycine dehydrogenase 0.48 54
Serratia liquefaciens MT49 0.81 IAI46_24845 orotate phosphoribosyltransferase 0.58 IAI46_20850 aminomethyl-transferring glycine dehydrogenase low > 87
Rahnella sp. WP5 0.81 EX31_RS14500 orotate phosphoribosyltransferase 0.58 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase low > 89
Dickeya dianthicola ME23 0.81 DZA65_RS00735 orotate phosphoribosyltransferase 0.58 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS00680 orotate phosphoribosyltransferase 0.58 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase low > 71
Erwinia tracheiphila HP pepo 2.2 0.80 IJEDHG_07760 pyrE orotate phosphoribosyltransferase 0.58 IJEDHG_03250 gcvP aminomethyl-transferring glycine dehydrogenase low > 61
Pantoea sp. MT58 0.80 IAI47_00600 orotate phosphoribosyltransferase 0.59 IAI47_03775 aminomethyl-transferring glycine dehydrogenase low > 76
Pantoea agglomerans CFBP13505 P0401 0.80 PagCFBP13505_RS18745 orotate phosphoribosyltransferase 0.59 PagCFBP13505_RS15925 aminomethyl-transferring glycine dehydrogenase low > 74
Erwinia tracheiphila SCR3 0.80 LU632_RS22015 pyrE orotate phosphoribosyltransferase 0.58 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase low > 73
Alteromonas macleodii MIT1002 0.77 MIT1002_04070 Orotate phosphoribosyltransferase 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0216 orotate phosphoribosyltransferase 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0216 orotate phosphoribosyltransferase 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit — —
Pseudomonas stutzeri RCH2 0.71 Psest_3810 orotate phosphoribosyltransferase 0.60 Psest_0183 glycine dehydrogenase (decarboxylating) low > 67
Pseudomonas sp. RS175 0.71 PFR28_04417 Orotate phosphoribosyltransferase 0.56 PFR28_03383 Glycine dehydrogenase (decarboxylating) — —
Pseudomonas sp. S08-1 0.70 OH686_13590 Orotate phosphoribosyltransferase 0.60 OH686_11165 glycine dehydrogenase low > 80
Pseudomonas aeruginosa PUPa3 0.69 DQ20_RS49580 pyrE;go_function=orotate orotate phosphoribosyltransferase 0.57 DQ20_RS50180 gcvP;go_function=glycine aminomethyl-transferring glycine dehydrogenase low > 101
Pseudomonas aeruginosa MRSN321 0.69 DY961_RS12545 pyrE;go_function=orotate orotate phosphoribosyltransferase 0.57 DY961_RS11935 gcvP;go_function=glycine aminomethyl-transferring glycine dehydrogenase low > 100
Pseudomonas aeruginosa PA14 0.69 IKLFDK_26800 Orotate phosphoribosyltransferase 0.57 IKLFDK_27405 aminomethyl-transferring glycine dehydrogenase low > 98
Pseudomonas sp. SVBP6 0.69 COO64_RS01495 pyrE orotate phosphoribosyltransferase 0.58 COO64_RS00950 gcvP aminomethyl-transferring glycine dehydrogenase low > 93
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.56 Pf6N2E2_5558 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) — —
Pseudomonas segetis P6 0.68 MPMX49_00027 Orotate phosphoribosyltransferase 0.59 MPMX49_04479 Glycine dehydrogenase (decarboxylating) — —
Pseudomonas putida KT2440 0.68 PP_5291 Orotate phosphoribosyltransferase 0.58 PP_5192 glycine dehydrogenase — —
Pseudomonas sp. BP01 0.68 JOY50_RS09035 pyrE orotate phosphoribosyltransferase 0.59 JOY50_RS22405 gcvP aminomethyl-transferring glycine dehydrogenase low > 84
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_09245 orotate phosphoribosyltransferase 0.58 AO353_08720 glycine dehydrogenase — —
Pseudomonas sp. DMC3 0.67 GFF411 Orotate phosphoribosyltransferase 0.58 GFF308 Glycine dehydrogenase (decarboxylating) low > 89
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0786 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.59 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) — —
Pseudomonas orientalis W4I3 0.67 QF045_RS02150 orotate phosphoribosyltransferase 0.57 QF045_RS24485 aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas lactucae CFBP13502 0.67 GEMAOFIL_00027 Orotate phosphoribosyltransferase 0.57 GEMAOFIL_04608 Glycine dehydrogenase (decarboxylating) — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS29475 orotate phosphoribosyltransferase 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_12520 orotate phosphoribosyltransferase 0.56 AO356_18170 glycine dehydrogenase low > 104
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.58 PfGW456L13_904 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) — —
Pseudomonas simiae WCS417 0.67 PS417_27795 orotate phosphoribosyltransferase 0.57 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS29475 orotate phosphoribosyltransferase 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.59 Pf1N1B4_2236 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) — —
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS15640 orotate phosphoribosyltransferase 0.57 ABZR86_RS08305 aminomethyl-transferring glycine dehydrogenase low > 74
Dechlorosoma suillum PS 0.57 Dsui_0873 orotate phosphoribosyltransferase 0.60 Dsui_2737 glycine dehydrogenase, decarboxylating — —
Rhodanobacter sp000427505 FW510-R12 0.57 LRK53_RS17885 orotate phosphoribosyltransferase 0.54 LRK53_RS09610 aminomethyl-transferring glycine dehydrogenase low > 59
Castellaniella sp019104865 MT123 0.56 ABCV34_RS10890 orotate phosphoribosyltransferase 0.54 ABCV34_RS08835 aminomethyl-transferring glycine dehydrogenase — —
Rhodanobacter denitrificans MT42 0.56 LRK55_RS08720 orotate phosphoribosyltransferase 0.56 LRK55_RS00260 aminomethyl-transferring glycine dehydrogenase low > 63
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS09190 orotate phosphoribosyltransferase 0.56 LRK54_RS00520 aminomethyl-transferring glycine dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_15685 pyrE orotate phosphoribosyltransferase 0.55 OKGIIK_06740 gcvP2 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain — —
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01225 orotate phosphoribosyltransferase 0.56 RR42_RS20070 glycine dehydrogenase — —
Acidovorax sp. GW101-3H11 0.52 Ac3H11_3341 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.54 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 79
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS05590 orotate phosphoribosyltransferase 0.56 ABZR87_RS03935 aminomethyl-transferring glycine dehydrogenase low > 80
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS10075 orotate phosphoribosyltransferase 0.57 RALBFv3_RS08660 glycine dehydrogenase (aminomethyl-transferring) — —
Ralstonia solanacearum UW163 0.51 UW163_RS03505 orotate phosphoribosyltransferase 0.57 UW163_RS04950 glycine dehydrogenase (aminomethyl-transferring) — —
Ralstonia solanacearum GMI1000 0.50 RS_RS00685 orotate phosphoribosyltransferase 0.56 RS_RS16510 glycine dehydrogenase — —
Variovorax sp. OAS795 0.50 ABID97_RS03910 orotate phosphoribosyltransferase 0.56 ABID97_RS19655 aminomethyl-transferring glycine dehydrogenase low > 91
Variovorax sp. SCN45 0.50 GFF5065 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.56 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 127
Ralstonia solanacearum PSI07 0.50 RPSI07_RS23295 orotate phosphoribosyltransferase 0.57 RPSI07_RS08575 glycine dehydrogenase (aminomethyl-transferring) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF1882 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.54 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 90
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.55 Xcc-8004.3878.1 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 74
Lysobacter sp. OAE881 0.44 ABIE51_RS00065 orotate phosphoribosyltransferase 0.55 ABIE51_RS14345 aminomethyl-transferring glycine dehydrogenase 0.71 10

Not shown: 6 genomes with orthologs for CSW01_01120 only; 24 genomes with orthologs for CSW01_15330 only