Conservation of cofitness between CSW01_02775 and CSW01_13155 in Vibrio cholerae E7946 ATCC 55056

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02775 glycerol-3-phosphate acyltransferase 1.0 CSW01_13155 ribonuclease R 0.62 19
Serratia liquefaciens MT49 0.65 IAI46_22090 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.60 IAI46_01660 ribonuclease R low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3173 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.61 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 low > 78
Klebsiella pneumoniae MRSN742743 0.64 GJGHJB_00654 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 GJGHJB_04566 rnr ribonuclease R low > 83
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13516_RS03310 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.60 PagCFBP13516_RS02640 rnr ribonuclease R low > 80
Pectobacterium carotovorum WPP14 0.64 HER17_RS04005 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.62 HER17_RS03835 ribonuclease R low > 75
Pantoea sp. MT58 0.63 IAI47_03070 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.60 IAI47_02625 ribonuclease R low > 76
Rahnella sp. WP5 0.63 EX31_RS08175 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 EX31_RS08785 ribonuclease R low > 89
Klebsiella pneumoniae MKP103 0.63 KDGMDA_05300 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 KDGMDA_11075 ribonuclease R low > 94
Enterobacter sp. TBS_079 0.63 MPMX20_03896 putative glycerol-3-phosphate acyltransferase 0.60 MPMX20_00460 Ribonuclease R low > 85
Escherichia coli ECRC100 0.63 OKFHMN_18695 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.62 OKFHMN_12220 rnr ribonuclease R low > 79
Escherichia coli ECRC102 0.63 NIAGMN_16460 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.62 NIAGMN_10070 rnr ribonuclease R low > 80
Escherichia coli ECRC101 0.63 MCAODC_09210 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.62 MCAODC_02735 rnr ribonuclease R low > 87
Escherichia coli ECOR27 0.63 NOLOHH_10485 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 NOLOHH_04485 rnr ribonuclease R low > 75
Escherichia coli ECRC62 0.63 BNILDI_01030 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 BNILDI_07005 rnr ribonuclease R low > 75
Escherichia coli ECRC98 0.63 JDDGAC_22330 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.62 JDDGAC_15860 rnr ribonuclease R low > 87
Escherichia coli ECRC99 0.63 KEDOAH_09450 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.62 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS17665 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 ECOLIN_RS24265 ribonuclease R low > 55
Escherichia coli BW25113 0.63 b3059 ygiH hypothetical protein (NCBI) 0.61 b4179 vacB putative enzyme (VIMSS) low > 76
Escherichia coli BL21 0.63 ECD_02929 putative glycerol-3-phosphate acyltransferase 0.61 ECD_04046 exoribonuclease R, RNase R low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00645 putative glycerol-3-phosphate acyltransferase 0.61 OHPLBJKB_03863 Ribonuclease R low > 74
Escherichia coli ECOR38 0.63 HEPCGN_17550 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 HEPCGN_10450 rnr ribonuclease R low > 88
Escherichia fergusonii Becca 0.63 EFB2_00752 putative glycerol-3-phosphate acyltransferase 0.61 EFB2_04356 Ribonuclease R low > 86
Enterobacter asburiae PDN3 0.63 EX28DRAFT_3087 acyl-phosphate glycerol 3-phosphate acyltransferase 0.60 EX28DRAFT_3376 ribonuclease R 0.83 7
Dickeya dianthicola ME23 0.63 DZA65_RS18270 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 DZA65_RS18405 ribonuclease R low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS17135 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 DDA3937_RS17260 ribonuclease R low > 74
Erwinia tracheiphila SCR3 0.62 LU632_RS20705 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 LU632_RS21750 rnr ribonuclease R low > 73
Dickeya dianthicola 67-19 0.62 HGI48_RS17185 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 HGI48_RS17315 ribonuclease R low > 71
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_14355 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.61 IJEDHG_13230 rnr ribonuclease R low > 61
Klebsiella michiganensis M5al 0.61 BWI76_RS24490 glycerol-3-phosphate acyltransferase 0.61 BWI76_RS02575 exoribonuclease R low > 92
Erwinia amylovora T8 0.61 OLJFJH_07605 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.62 OLJFJH_02470 ribonuclease R low > 58
Shewanella loihica PV-4 0.59 Shew_1001 putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) 0.57 Shew_3289 ribonuclease R (RefSeq) low > 60
Shewanella oneidensis MR-1 0.59 SO1290 conserved hypothetical protein TIGR00023 (NCBI ptt file) 0.55 SO3935 vacB ribonuclease R (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.58 MIT1002_00740 G3P acyltransferase 0.52 MIT1002_03606 Ribonuclease R low > 70
Shewanella sp. ANA-3 0.58 Shewana3_3082 putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) 0.56 Shewana3_0697 RNAse R (RefSeq) low > 73
Shewanella amazonensis SB2B 0.53 Sama_0828 putative glycerol-3-phosphate acyltransferase PlsY (RefSeq) 0.54 Sama_3067 exoribonuclease II (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0827 acyl-phosphate glycerol 3-phosphate acyltransferase 0.47 B158DRAFT_1989 ribonuclease R low > 40
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS03335 glycerol-3-phosphate acyltransferase 0.42 RR42_RS13065 ribonuclease R — —
Acidovorax sp. GW101-3H11 0.42 Ac3H11_2623 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.35 Ac3H11_412 3'-to-5' exoribonuclease RNase R — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF289 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.34 GFF4921 3'-to-5' exoribonuclease RNase R — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS00805 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.41 ABZR87_RS10985 ribonuclease R — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS05150 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.40 RALBFv3_RS15345 ribonuclease R — —
Ralstonia solanacearum UW163 0.40 UW163_RS08475 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.40 UW163_RS12810 ribonuclease R — —
Ralstonia solanacearum GMI1000 0.40 RS_RS12765 glycerol-3-phosphate acyltransferase 0.41 RS_RS06155 ribonuclease R — —
Ralstonia solanacearum PSI07 0.39 RPSI07_RS12150 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.41 RPSI07_RS18030 ribonuclease R — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS02770 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.40 QEN71_RS22925 ribonuclease R — —
Methylophilus sp. DMC18 0.37 GFF2344 Glycerol-3-phosphate acyltransferase 0.43 GFF635 Ribonuclease R — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS03025 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.37 ABCV34_RS06625 ribonuclease R — —
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS04275 glycerol-3-phosphate acyltransferase 0.39 HSERO_RS09290 ribonuclease R — —
Pseudomonas sp. BP01 0.35 JOY50_RS18090 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.46 JOY50_RS17320 rnr ribonuclease R low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4637 acyl-phosphate glycerol-3-phosphate acyltransferase 0.47 Psyr_0579 RNAse R low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4637 acyl-phosphate glycerol-3-phosphate acyltransferase 0.47 Psyr_0579 RNAse R low > 86
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04123 acyl-phosphate glycerol-3-phosphate acyltransferase 0.40 H281DRAFT_00712 RNAse R — —
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS15935 glycerol-3-phosphate acyltransferase 0.40 BPHYT_RS08455 ribonuclease R — —
Pseudomonas segetis P6 0.34 ACVTMO_RS04300 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.47 ACVTMO_RS20555 rnr ribonuclease R low > 75
Paraburkholderia graminis OAS925 0.34 ABIE53_003358 glycerol-3-phosphate acyltransferase PlsY 0.40 ABIE53_001940 ribonuclease R — —
Variovorax sp. SCN45 0.33 GFF3102 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY (EC 2.3.1.n3) 0.34 GFF399 3'-to-5' exoribonuclease RNase R — —
Variovorax sp. OAS795 0.33 ABID97_RS21700 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.35 ABID97_RS17200 ribonuclease R — —
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_07365 glycerol-3-phosphate acyltransferase 0.47 AO353_13200 exoribonuclease R low > 101
Pseudomonas sp. RS175 0.33 PFR28_04074 Glycerol-3-phosphate acyltransferase 0.47 PFR28_05130 Ribonuclease R low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1190 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.47 PfGW456L13_144 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas sp. SVBP6 0.33 COO64_RS22560 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.47 COO64_RS17955 rnr ribonuclease R low > 91
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_14285 glycerol-3-phosphate acyltransferase 0.47 AO356_08610 exoribonuclease R low > 104
Pseudomonas aeruginosa MRSN321 0.32 PFGADD_00591 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.47 PFGADD_05171 rnr ribonuclease R low > 99
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4795 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.47 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R low > 103
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2517 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 0.47 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas aeruginosa PA14 0.32 IKLFDK_22505 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.48 IKLFDK_28865 ribonuclease R low > 98
Pseudomonas aeruginosa PUPa3 0.32 NPBIFN_00595 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.47 NPBIFN_05247 rnr ribonuclease R low > 101
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05292 Glycerol-3-phosphate acyltransferase 0.47 GEMAOFIL_00747 Ribonuclease R low > 96
Pseudomonas simiae WCS417 0.32 PS417_25860 glycerol-3-phosphate acyltransferase 0.46 PS417_02555 exoribonuclease R low > 88
Pseudomonas protegens RBAN4 0.32 FABNJH_28495 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY 0.47 FABNJH_02985 rnr ribonuclease R — —
Pseudomonas sp. DMC3 0.32 GFF47 Glycerol-3-phosphate acyltransferase 0.47 GFF3229 Ribonuclease R low > 89
Pseudomonas orientalis W4I3 0.32 QF045_RS00260 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.47 QF045_RS05605 ribonuclease R low > 93
Marinobacter adhaerens HP15 0.32 HP15_319 predicted membrane protein 0.43 HP15_622 exoribonuclease R low > 73
Pseudomonas fluorescens SBW25 0.31 PFLU_RS27515 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.46 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas putida KT2440 0.31 PP_0391 Glycerol-3-phosphate acyltransferase 0.47 PP_4880 exoribonuclease R low > 96
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS27515 glycerol-3-phosphate 1-O-acyltransferase PlsY 0.46 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas stutzeri RCH2 0.31 Psest_3678 acyl-phosphate glycerol 3-phosphate acyltransferase 0.46 Psest_0691 ribonuclease R low > 67
Pseudomonas sp. S08-1 0.26 OH686_14990 acyl-phosphate glycerol 3-phosphate acyltransferase 0.46 OH686_15910 ribonuclease R low > 80
Dechlorosoma suillum PS 0.26 Dsui_1214 acyl-phosphate glycerol 3-phosphate acyltransferase 0.43 Dsui_3128 ribonuclease R — —

Not shown: 14 genomes with orthologs for CSW01_02775 only; 9 genomes with orthologs for CSW01_13155 only