Conservation of cofitness between CSW01_02560 and CSW01_12885 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02560 chromosome initiation inhibitor 1.0 CSW01_12885 fructose 1,6-bisphosphatase 0.65 18
Klebsiella michiganensis M5al 0.46 BWI76_RS23930 transcriptional regulator ArgP 0.76 BWI76_RS02815 fructose-bisphosphatase class I low > 92
Rahnella sp. WP5 0.46 EX31_RS21460 LysR family transcriptional regulator ArgP 0.75 EX31_RS08670 class 1 fructose-bisphosphatase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3015 Chromosome initiation inhibitor 0.76 GFF880 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 0.34 45
Dickeya dianthicola ME23 0.46 DZA65_RS19550 LysR family transcriptional regulator ArgP 0.76 DZA65_RS19645 class 1 fructose-bisphosphatase low > 75
Dickeya dianthicola 67-19 0.46 HGI48_RS18415 LysR family transcriptional regulator ArgP 0.76 HGI48_RS18510 class 1 fructose-bisphosphatase low > 71
Erwinia tracheiphila SCR3 0.45 LU632_RS05845 LysR family transcriptional regulator ArgP 0.75 LU632_RS02130 fbp class 1 fructose-bisphosphatase
Serratia liquefaciens MT49 0.45 IAI46_20910 LysR family transcriptional regulator ArgP 0.76 IAI46_01795 class 1 fructose-bisphosphatase low > 86
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2967 transcriptional regulator, ArgP family 0.76 EX28DRAFT_3419 Fructose-1,6-bisphosphatase low > 76
Enterobacter sp. TBS_079 0.45 MPMX20_03773 HTH-type transcriptional regulator ArgP 0.76 MPMX20_00514 Fructose-1,6-bisphosphatase class 1 low > 85
Pantoea sp. MT58 0.45 IAI47_03715 LysR family transcriptional regulator ArgP 0.74 IAI47_02750 class 1 fructose-bisphosphatase low > 76
Dickeya dadantii 3937 0.45 DDA3937_RS18490 LysR family transcriptional regulator ArgP 0.75 DDA3937_RS18575 class 1 fructose-bisphosphatase low > 74
Escherichia coli ECOR27 0.44 NOLOHH_11355 argP DNA-binding transcriptional regulator ArgP 0.76 NOLOHH_04205 fbp class 1 fructose-bisphosphatase low > 75
Escherichia fergusonii Becca 0.44 EFB2_00987 HTH-type transcriptional regulator ArgP 0.76 EFB2_04301 Fructose-1,6-bisphosphatase class 1 low > 86
Escherichia coli ECRC100 0.44 OKFHMN_19450 argP DNA-binding transcriptional regulator ArgP 0.76 OKFHMN_11945 fbp class 1 fructose-bisphosphatase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00800 HTH-type transcriptional regulator ArgP 0.76 OHPLBJKB_03803 Fructose-1,6-bisphosphatase class 1 low > 73
Escherichia coli ECRC99 0.44 KEDOAH_08690 argP DNA-binding transcriptional regulator ArgP 0.76 KEDOAH_16210 fbp class 1 fructose-bisphosphatase
Escherichia coli BL21 0.44 ECD_02747 transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 0.76 ECD_04100 fructose-1,6-bisphosphatase I low > 61
Escherichia coli BW25113 0.44 b2916 argP chromosome replication initiation inhibitor protein (NCBI) 0.76 b4232 fbp fructose-1,6-bisphosphatase (NCBI) low > 76
Escherichia coli ECRC98 0.44 JDDGAC_23090 argP DNA-binding transcriptional regulator ArgP 0.76 JDDGAC_15585 fbp class 1 fructose-bisphosphatase low > 86
Escherichia coli ECRC101 0.44 MCAODC_09970 argP DNA-binding transcriptional regulator ArgP 0.76 MCAODC_02450 fbp class 1 fructose-bisphosphatase low > 87
Escherichia coli ECRC102 0.44 NIAGMN_17215 argP DNA-binding transcriptional regulator ArgP 0.76 NIAGMN_09795 fbp class 1 fructose-bisphosphatase
Escherichia coli ECRC62 0.44 BNILDI_09890 argP DNA-binding transcriptional regulator ArgP 0.76 BNILDI_07310 fbp class 1 fructose-bisphosphatase low > 75
Escherichia coli Nissle 1917 0.44 ECOLIN_RS16225 DNA-binding transcriptional regulator ArgP 0.76 ECOLIN_RS24555 class 1 fructose-bisphosphatase
Escherichia coli ECOR38 0.44 HEPCGN_18750 argP DNA-binding transcriptional regulator ArgP 0.76 HEPCGN_10145 fbp class 1 fructose-bisphosphatase low > 87
Pectobacterium carotovorum WPP14 0.44 HER17_RS02715 LysR family transcriptional regulator ArgP 0.76 HER17_RS02620 class 1 fructose-bisphosphatase low > 75
Shewanella loihica PV-4 0.42 Shew_1844 chromosome replication initiation inhibitor protein (RefSeq) 0.35 Shew_0773 fructose-1,6-bisphosphatase (RefSeq)
Shewanella amazonensis SB2B 0.40 Sama_2987 chromosome replication initiation inhibitor protein (RefSeq) 0.37 Sama_0599 fructose-1,6-bisphosphatase (RefSeq)
Shewanella oneidensis MR-1 0.37 SO2866 iciA chromosome initiation inhibitor (NCBI ptt file) 0.35 SO3991 fbp fructose-1,6-bisphosphatase (NCBI ptt file)
Shewanella sp. ANA-3 0.37 Shewana3_1652 chromosome replication initiation inhibitor protein (RefSeq) 0.35 Shewana3_0648 fructose-1,6-bisphosphatase (RefSeq) low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU0594 iciA chromosome initiation inhibitor (TIGR) 0.48 DVU1841 fbp fructose-1,6-bisphosphatase (TIGR) low > 55
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.38 Psyr_0370 D-fructose 1,6-bisphosphatase
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.38 Psyr_0370 D-fructose 1,6-bisphosphatase
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.37 PFLU_RS01745 class 1 fructose-bisphosphatase
Pseudomonas fluorescens SBW25 0.32 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.37 PFLU_RS01745 class 1 fructose-bisphosphatase
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_04995 LysR family transcriptional regulator 0.38 AO356_09670 fructose 1,6-bisphosphatase
Pseudomonas simiae WCS417 0.32 PS417_22165 LysR family transcriptional regulator 0.38 PS417_01690 fructose 1,6-bisphosphatase
Pseudomonas stutzeri RCH2 0.32 Psest_1166 transcriptional regulator, ArgP family 0.39 Psest_3956 Fructose-1,6-bisphosphatase
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_03915 LysR family transcriptional regulator 0.38 AO353_12205 fructose 1,6-bisphosphatase
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1782 Chromosome initiation inhibitor 0.39 PfGW456L13_335 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_708 Chromosome initiation inhibitor 0.39 Pf1N1B4_1596 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
Pseudomonas sp. RS175 0.31 PFR28_00608 HTH-type transcriptional regulator ArgP 0.38 PFR28_04956 Fructose-1,6-bisphosphatase class 1
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS18360 transcriptional regulator ArgP 0.40 RALBFv3_RS03275 class 1 fructose-bisphosphatase
Ralstonia solanacearum UW163 0.31 UW163_RS20770 transcriptional regulator ArgP 0.40 UW163_RS10450 class 1 fructose-bisphosphatase
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_2849 Chromosome initiation inhibitor 0.38 Pf6N2E2_3813 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
Pseudomonas putida KT2440 0.30 PP_0917 Chromosome initiation inhibitor 0.39 PP_5040 fructose-1,6-bisphosphatase, class 1
Pseudomonas sp. S08-1 0.30 OH686_07195 Transcriptional regulator ArgP, LysR family 0.39 OH686_10290 Fructose-1,6-bisphosphatase, type I
Ralstonia solanacearum PSI07 0.30 RPSI07_RS03900 transcriptional regulator ArgP 0.40 RPSI07_RS14035 class 1 fructose-bisphosphatase
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS14025 LysR family transcriptional regulator ArgP 0.41 ABZR87_RS15125 class 1 fructose-bisphosphatase
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS23610 LysR family transcriptional regulator ArgP 0.41 QEN71_RS03770 class 1 fructose-bisphosphatase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF5065 Chromosome initiation inhibitor 0.40 GFF274 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_2123 chromosome replication initiation inhibitor protein (RefSeq) 0.49 DvMF_0404 fructose-1,6-bisphosphatase (RefSeq)
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_04882 transcriptional regulator, LysR family 0.42 H281DRAFT_03991 D-fructose 1,6-bisphosphatase
Alteromonas macleodii MIT1002 0.29 MIT1002_00129 OriC replication inhibitor 0.35 MIT1002_00169 Fructose-1,6-bisphosphatase class 1
Paraburkholderia graminis OAS925 0.29 ABIE53_001719 LysR family transcriptional regulator (chromosome initiation inhibitor) 0.42 ABIE53_003219 fructose-1,6-bisphosphatase I
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS07440 LysR family transcriptional regulator 0.42 BPHYT_RS15225 fructose-1,6-bisphosphatase class 1
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS31465 LysR family transcriptional regulator 0.40 RR42_RS05195 fructose 1,6-bisphosphatase
Azospirillum sp. SherDot2 0.28 MPMX19_01759 putative HTH-type transcriptional regulator 0.37 MPMX19_02944 Fructose-1,6-bisphosphatase class 1 low > 112
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS10990 LysR family transcriptional regulator ArgP 0.36 ABZR86_RS15255 class 1 fructose-bisphosphatase low > 74
Rhodospirillum rubrum S1H 0.27 Rru_A0658 Transcriptional Regulator, LysR family (NCBI) 0.37 Rru_A2403 Inositol phosphatase/fructose-1,6-bisphosphatase (NCBI) low > 58
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_01770 Transcriptional regulator ArgP 0.36 OKGIIK_15125 fbp class 1 fructose-bisphosphatase low > 52
Acidovorax sp. GW101-3H11 0.27 Ac3H11_3378 chromosome replication initiation inhibitor protein 0.41 Ac3H11_2634 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.1463.1 Transcriptional regulator lysR family 0.38 Xcc-8004.127.1 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) low > 74
Variovorax sp. OAS795 0.26 ABID97_RS23875 LysR family transcriptional regulator ArgP 0.43 ABID97_RS12875 class 1 fructose-bisphosphatase low > 91
Variovorax sp. SCN45 0.23 GFF2318 Transcriptional regulator ArgP, LysR family 0.39 GFF3119 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)

Not shown: 6 genomes with orthologs for CSW01_02560 only; 19 genomes with orthologs for CSW01_12885 only