Conservation of cofitness between CSW01_06735 and CSW01_12680 in Vibrio cholerae E7946 ATCC 55056

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06735 methylisocitrate lyase 1.0 CSW01_12680 cytosol aminopeptidase 0.85 20
Marinobacter adhaerens HP15 0.68 HP15_1932 methylisocitrate lyase 2 0.46 HP15_1315 leucyl aminopeptidase — —
Alteromonas macleodii MIT1002 0.67 MIT1002_03129 Methylisocitrate lyase 0.79 MIT1002_03197 Cytosol aminopeptidase low > 70
Shewanella loihica PV-4 0.67 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) 0.81 Shew_0939 leucyl aminopeptidase (RefSeq) low > 60
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS44335 prpB;go_function=methylisocitrate methylisocitrate lyase 0.52 DQ20_RS49000 leucyl aminopeptidase low > 101
Pseudomonas aeruginosa PA14 0.65 IKLFDK_03445 methylisocitrate lyase 0.51 IKLFDK_19730 leucyl aminopeptidase low > 98
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS08515 prpB;go_function=methylisocitrate methylisocitrate lyase 0.52 DY961_RS13735 leucyl aminopeptidase low > 100
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1343 methylisocitrate lyase 0.60 B158DRAFT_1167 Leucyl aminopeptidase 0.39 38
Pseudomonas sp. RS175 0.64 PFR28_02928 2-methylisocitrate lyase 0.53 PFR28_03528 Cytosol aminopeptidase 0.27 79
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_00900 2-methylisocitrate lyase 0.54 AO353_04535 aminopeptidase low > 101
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_20865 2-methylisocitrate lyase 0.54 AO356_17470 aminopeptidase low > 104
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) 0.54 Pf1N1B4_898 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.54 Pf6N2E2_5420 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 103
Pseudomonas sp. DMC3 0.63 GFF5230 2-methylisocitrate lyase 0.54 GFF1952 Cytosol aminopeptidase low > 89
Pseudomonas simiae WCS417 0.63 PS417_21080 2-methylisocitrate lyase 0.54 PS417_05165 cytosol aminopeptidase — —
Pseudomonas stutzeri RCH2 0.63 Psest_2321 methylisocitrate lyase 0.51 Psest_1235 Leucyl aminopeptidase low > 67
Pseudomonas sp. SVBP6 0.63 COO64_RS09900 prpB methylisocitrate lyase 0.51 COO64_RS04415 leucyl aminopeptidase low > 93
Pseudomonas putida KT2440 0.63 PP_2334 2-methylisocitrate lyase 0.52 PP_0980 Probable cytosol aminopeptidase low > 96
Shewanella sp. ANA-3 0.63 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) 0.81 Shewana3_3006 leucyl aminopeptidase (RefSeq) 0.72 11
Pseudomonas sp. BP01 0.63 JOY50_RS25750 prpB methylisocitrate lyase 0.52 JOY50_RS11265 leucyl aminopeptidase low > 84
Shewanella oneidensis MR-1 0.63 SO0345 prpB methylisocitrate lyase (NCBI ptt file) 0.81 SO1368 pepA-2 cytosol aminopeptidase (NCBI ptt file) low > 76
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS02670 methylisocitrate lyase 0.48 RALBFv3_RS04550 leucyl aminopeptidase low > 76
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS15660 2-methylisocitrate lyase 0.46 HSERO_RS15600 cytosol aminopeptidase — —
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) 0.54 PfGW456L13_4846 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.41 37
Ralstonia solanacearum UW163 0.63 UW163_RS11055 methylisocitrate lyase 0.48 UW163_RS09120 leucyl aminopeptidase — —
Pseudomonas orientalis W4I3 0.63 QF045_RS22905 methylisocitrate lyase 0.54 QF045_RS08155 leucyl aminopeptidase low > 93
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS22690 methylisocitrate lyase 0.54 PFLU_RS05235 leucyl aminopeptidase 0.26 48
Pseudomonas fluorescens SBW25 0.62 PFLU_RS22690 methylisocitrate lyase 0.54 PFLU_RS05235 leucyl aminopeptidase low > 109
Ralstonia solanacearum PSI07 0.62 RPSI07_RS14645 methylisocitrate lyase 0.49 RPSI07_RS12825 leucyl aminopeptidase low > 81
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_04361 2-methylisocitrate lyase 0.54 GEMAOFIL_01239 Cytosol aminopeptidase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2085 methylisocitrate lyase 0.54 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17 low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2085 methylisocitrate lyase 0.54 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17 low > 86
Pseudomonas segetis P6 0.62 MPMX49_02628 2-methylisocitrate lyase 0.53 MPMX49_03516 Cytosol aminopeptidase 0.44 34
Methylophilus sp. DMC18 0.62 GFF469 2-methylisocitrate lyase 0.49 GFF1514 Cytosol aminopeptidase — —
Ralstonia solanacearum GMI1000 0.62 RS_RS10050 methylisocitrate lyase 0.47 RS_RS12120 cytosol aminopeptidase low > 80
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS14590 methylisocitrate lyase 0.50 ABZR87_RS00150 leucyl aminopeptidase low > 80
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS17555 methylisocitrate lyase 0.51 QEN71_RS25205 leucyl aminopeptidase 0.55 37
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03339 2-methylisocitrate lyase 0.82 OHPLBJKB_03776 Cytosol aminopeptidase low > 74
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.48 RR42_RS16225 cytosol aminopeptidase low > 128
Escherichia coli ECRC62 0.62 BNILDI_23190 prpB methylisocitrate lyase 0.82 BNILDI_07455 pepA leucyl aminopeptidase low > 75
Escherichia fergusonii Becca 0.62 EFB2_03706 2-methylisocitrate lyase 0.82 EFB2_04275 Cytosol aminopeptidase low > 86
Escherichia coli BW25113 0.62 b0331 prpB 2-methylisocitrate lyase (NCBI) 0.82 b4260 pepA leucyl aminopeptidase (NCBI) low > 76
Escherichia coli ECOR27 0.62 NOLOHH_01775 prpB methylisocitrate lyase 0.82 NOLOHH_04055 pepA leucyl aminopeptidase low > 76
Escherichia coli ECOR38 0.62 HEPCGN_07485 prpB methylisocitrate lyase 0.82 HEPCGN_09980 pepA leucyl aminopeptidase low > 88
Escherichia coli BL21 0.62 ECD_00286 2-methylisocitrate lyase 0.82 ECD_04126 multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor low > 61
Escherichia coli ECRC98 0.61 JDDGAC_12555 prpB methylisocitrate lyase 0.82 JDDGAC_15430 pepA leucyl aminopeptidase low > 87
Escherichia coli ECRC100 0.61 OKFHMN_08900 prpB methylisocitrate lyase 0.82 OKFHMN_11790 pepA leucyl aminopeptidase low > 79
Escherichia coli ECRC99 0.61 KEDOAH_19065 prpB methylisocitrate lyase 0.82 KEDOAH_16360 pepA leucyl aminopeptidase — —
Escherichia coli ECRC102 0.61 NIAGMN_06955 prpB methylisocitrate lyase 0.82 NIAGMN_09640 pepA leucyl aminopeptidase low > 80
Escherichia coli ECRC101 0.61 MCAODC_28130 prpB methylisocitrate lyase 0.82 MCAODC_02295 pepA leucyl aminopeptidase low > 87
Escherichia coli Nissle 1917 0.61 ECOLIN_RS02150 methylisocitrate lyase 0.82 ECOLIN_RS24695 leucyl aminopeptidase low > 55
Shewanella amazonensis SB2B 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) 0.81 Sama_0795 leucyl aminopeptidase (RefSeq) low > 62
Rhodanobacter sp000427505 FW510-R12 0.60 LRK53_RS09460 methylisocitrate lyase 0.45 LRK53_RS16125 leucyl aminopeptidase low > 59
Acinetobacter baumannii LAC-4 0.60 RR41_RS18485 methylisocitrate lyase 0.38 RR41_RS17825 leucyl aminopeptidase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) 0.82 GFF949 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 78
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_06565 prpB methylisocitrate lyase 0.43 OKGIIK_11560 pepB leucyl aminopeptidase low > 53
Rhodanobacter denitrificans MT42 0.58 LRK55_RS00470 methylisocitrate lyase 0.44 LRK55_RS12110 leucyl aminopeptidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS00695 methylisocitrate lyase 0.44 LRK54_RS12375 leucyl aminopeptidase low > 59
Castellaniella sp019104865 MT123 0.58 ABCV34_RS01670 methylisocitrate lyase 0.43 ABCV34_RS08295 leucyl aminopeptidase — —
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) 0.44 Xcc-8004.4446.1 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 74
Lysobacter sp. OAE881 0.57 ABIE51_RS06015 methylisocitrate lyase 0.46 ABIE51_RS04475 leucyl aminopeptidase low > 62
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS08480 methylisocitrate lyase 0.42 ABZR86_RS19105 leucyl aminopeptidase low > 74
Pseudomonas sp. S08-1 0.56 OH686_01690 methylisocitrate lyase 0.52 OH686_07810 Cytosol aminopeptidase PepA 0.87 10
Rhodospirillum rubrum S1H 0.34 Rru_A2320 Ankyrin (NCBI) 0.31 Rru_A0454 Leucyl aminopeptidase (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.33 TX73_012370 methylisocitrate lyase 0.25 TX73_015830 leucyl aminopeptidase low > 86
Variovorax sp. OAS795 0.32 ABID97_RS18835 oxaloacetate decarboxylase 0.37 ABID97_RS16580 leucyl aminopeptidase low > 91
Xanthobacter sp. DMC5 0.32 GFF2763 2,3-dimethylmalate lyase 0.28 GFF142 Cytosol aminopeptidase — —
Azospirillum sp. SherDot2 0.31 MPMX19_04657 2,3-dimethylmalate lyase 0.27 MPMX19_01593 Cytosol aminopeptidase low > 112
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_06209 carboxyvinyl-carboxyphosphonate phosphorylmutase 0.51 H281DRAFT_00123 aminopeptidase A. Metallo peptidase. MEROPS family M17 low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) 0.36 GFF4309 Cytosol aminopeptidase PepA (EC 3.4.11.1) — —
Bosea sp. OAE506 0.29 ABIE41_RS16605 isocitrate lyase/PEP mutase family protein 0.27 ABIE41_RS17710 leucyl aminopeptidase low > 77
Dinoroseobacter shibae DFL-12 0.29 Dshi_0689 isocitrate lyase family protein (RefSeq) 0.25 Dshi_1191 Leucyl aminopeptidase (RefSeq) low > 64
Azospirillum brasilense Sp245 0.27 AZOBR_RS27785 carboxyvinyl-carboxyphosphonate phosphorylmutase 0.29 AZOBR_RS16385 aminopeptidase A — —
Dickeya dianthicola 67-19 0.14 HGI48_RS06990 phosphoenolpyruvate mutase 0.83 HGI48_RS01955 leucyl aminopeptidase low > 71
Dickeya dianthicola ME23 0.14 DZA65_RS07470 phosphoenolpyruvate mutase 0.83 DZA65_RS02060 leucyl aminopeptidase low > 75

Not shown: 1 genomes with orthologs for CSW01_06735 only; 28 genomes with orthologs for CSW01_12680 only