Conservation of cofitness between CSW01_01285 and CSW01_07835 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01285 perosamine synthetase 1.0 CSW01_07835 catalase-peroxidase 0.98 19
Escherichia coli ECRC100 0.54 OKFHMN_24430 rfbE GDP-perosamine synthase RfbE/PerA 0.57 OKFHMN_13660 katG catalase/peroxidase HPI low > 79
Escherichia coli ECRC101 0.54 MCAODC_20510 rfbE GDP-perosamine synthase RfbE/PerA 0.57 MCAODC_04160 katG catalase/peroxidase HPI
Escherichia coli ECRC102 0.54 NIAGMN_22375 rfbE GDP-perosamine synthase RfbE/PerA 0.57 NIAGMN_11415 katG catalase/peroxidase HPI
Escherichia coli ECRC99 0.54 KEDOAH_03720 rfbE GDP-perosamine synthase RfbE/PerA 0.57 KEDOAH_14500 katG catalase/peroxidase HPI
Escherichia coli ECRC98 0.54 JDDGAC_28540 rfbE GDP-perosamine synthase RfbE/PerA 0.57 JDDGAC_17285 katG catalase/peroxidase HPI low > 87
Caulobacter crescentus NA1000 0.41 CCNA_01064 perosamine synthetase 0.58 CCNA_03138 peroxidase/catalase katG low > 66
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_01064 perosamine synthetase 0.58 CCNA_03138 peroxidase/catalase katG low > 67
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS22110 DegT/DnrJ/EryC1/StrS family aminotransferase 0.57 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS01760 aminotransferase DegT 0.57 CA265_RS00900 catalase/peroxidase HPI low > 88
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_0056 rfbE perosamine synthetase 0.82 Synpcc7942_1656 katG catalase/peroxidase HPI low > 38
Synechocystis sp000284455 PCC 6803 0.34 SGL_RS09505 DegT/DnrJ/EryC1/StrS family aminotransferase 0.74 SGL_RS09095 catalase/peroxidase HPI low > 52
Cellulophaga baltica 18 0.28 M666_RS12340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.59 M666_RS03625 catalase/peroxidase HPI low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS12735 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.61 ABZR88_RS16460 catalase/peroxidase HPI low > 71
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS21000 aminotransferase DegT 0.58 HSERO_RS06245 catalase-peroxidase low > 78
Shewanella amazonensis SB2B 0.27 Sama_2329 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) 0.82 Sama_3270 catalase (RefSeq) low > 62
Dickeya dadantii 3937 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.62 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Dickeya dianthicola 67-19 0.26 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.62 HGI48_RS08090 catalase/peroxidase HPI low > 71
Dickeya dianthicola ME23 0.25 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.62 DZA65_RS08685 catalase/peroxidase HPI low > 75
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase 0.58 RR42_RS26270 hydroperoxidase low > 128
Serratia liquefaciens MT49 0.25 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.61 IAI46_17030 catalase/peroxidase HPI low > 87
Pantoea sp. MT58 0.25 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.54 IAI47_07215 catalase/peroxidase HPI low > 76
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.54 PagCFBP13505_RS01335 catalase/peroxidase HPI low > 74
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.60 AO353_23210 hydroperoxidase low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.57 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Enterobacter sp. TBS_079 0.24 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.56 MPMX20_04528 Catalase-peroxidase low > 85
Rahnella sp. WP5 0.24 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.54 EX31_RS11140 catalase/peroxidase HPI low > 89
Acinetobacter baumannii LAC-4 0.24 RR41_RS18630 LegC family aminotransferase 0.56 RR41_RS16940 catalase/peroxidase HPI
Pectobacterium carotovorum WPP14 0.24 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.80 HER17_RS09165 catalase/peroxidase HPI low > 75
Klebsiella pneumoniae MKP103 0.24 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.56 KDGMDA_22580 Catalase-peroxidase low > 95
Erwinia amylovora T8 0.24 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.54 OLJFJH_12450 catalase/peroxidase HPI low > 58
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_0062 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.60 Echvi_1165 catalase/peroxidase HPI low > 79
Erwinia tracheiphila HP pepo 2.2 0.24 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.55 IJEDHG_12560 katG catalase/peroxidase HPI
Enterobacter asburiae PDN3 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.57 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Escherichia coli ECOR38 0.24 HEPCGN_03130 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA 0.57 HEPCGN_12305 katG catalase/peroxidase HPI
Erwinia tracheiphila SCR3 0.24 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.55 LU632_RS19500 katG catalase/peroxidase HPI
Escherichia coli BL21 0.24 ECD_01942 VioA, involved in dTDP-N-acetylviosamine synthesis 0.57 ECD_03828 catalase-peroxidase HPI, heme b-containing
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Klebsiella michiganensis M5al 0.23 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.55 BWI76_RS13925 catalase/peroxidase HPI low > 92
Dechlorosoma suillum PS 0.23 Dsui_1769 putative PLP-dependent enzyme possibly involved in cell wall biogenesis 0.85 Dsui_2233 catalase/peroxidase HPI low > 51
Shewanella sp. ANA-3 0.23 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) 0.77 Shewana3_0306 catalase/peroxidase HPI (RefSeq) low > 73
Escherichia coli ECOR27 0.23 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.57 NOLOHH_05805 katG catalase/peroxidase HPI low > 76
Marinobacter adhaerens HP15 0.23 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.76 HP15_1397 peroxidase/catalase HPI
Escherichia fergusonii Becca 0.23 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.57 EFB2_04671 Catalase-peroxidase low > 86
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.60 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Escherichia coli ECRC62 0.22 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.57 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.57 H281DRAFT_00053 catalase-peroxidase
Escherichia coli BW25113 0.22 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 0.57 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.57 OHPLBJKB_04108 Catalase-peroxidase low > 74
Methylophilus sp. DMC18 0.22 GFF528 dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase 0.79 GFF2031 Catalase-peroxidase low > 43
Escherichia coli Nissle 1917 0.22 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.57 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Ralstonia solanacearum PSI07 0.22 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.62 RPSI07_RS20110 catalase/peroxidase HPI
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.2801.1 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.59 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS29145 DegT/DnrJ/EryC1/StrS family aminotransferase 0.59 QEN71_RS29740 catalase/peroxidase HPI low > 153
Variovorax sp. SCN45 0.22 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Pseudomonas sp. BP01 0.22 JOY50_RS13135 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.58 JOY50_RS07970 katG catalase/peroxidase HPI low > 84
Pseudomonas sp. SVBP6 0.22 COO64_RS21480 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA 0.60 COO64_RS08175 katG catalase/peroxidase HPI low > 93
Pseudomonas stutzeri RCH2 0.22 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.55 Psest_2741 catalase/peroxidase HPI
Phaeobacter inhibens DSM 17395 0.22 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase 0.72 PGA1_78p00050 peroxidase/catalase HPI low > 62
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_03965 aminotransferase 0.60 AO356_07735 hydroperoxidase low > 104
Alteromonas macleodii MIT1002 0.22 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.51 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS08930 aminotransferase DegT 0.60 BPHYT_RS10310 catalase-peroxidase
Pseudomonas sp. DMC3 0.21 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.61 GFF1038 Catalase-peroxidase low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1844 Aminotransferase 0.58 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Shewanella loihica PV-4 0.20 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.51 Shew_0709 catalase/peroxidase HPI (RefSeq) low > 60
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.57 Ga0059261_3628 catalase/peroxidase HPI
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS13795 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.57 A4249_RS12750 catalase/peroxidase HPI
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase 0.63 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Bosea sp. OAE506 0.17 ABIE41_RS03045 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.76 ABIE41_RS01200 catalase/peroxidase HPI low > 77

Not shown: 29 genomes with orthologs for CSW01_01285 only; 16 genomes with orthologs for CSW01_07835 only