Conservation of cofitness between CSW01_03700 and CSW01_06790 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03700 multi-copper polyphenol oxidoreductase 1.0 CSW01_06790 maleylacetoacetate isomerase 0.75 11
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_15930 laccase 0.32 AO356_16835 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 104
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF4183 COG1496: Uncharacterized conserved protein 0.41 GFF3802 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 78
Escherichia coli ECRC100 0.47 OKFHMN_21255 yfiH purine nucleoside phosphorylase YfiH 0.42 OKFHMN_23605 maiA maleylacetoacetate isomerase low > 79
Escherichia coli ECRC99 0.47 KEDOAH_06965 yfiH purine nucleoside phosphorylase YfiH 0.42 KEDOAH_04580 maiA maleylacetoacetate isomerase — —
Pseudomonas segetis P6 0.47 ACVTMO_RS19435 pgeF peptidoglycan editing factor PgeF 0.54 ACVTMO_RS14145 maiA maleylacetoacetate isomerase low > 75
Escherichia coli ECRC102 0.47 NIAGMN_19025 yfiH purine nucleoside phosphorylase YfiH 0.42 NIAGMN_21370 maiA maleylacetoacetate isomerase low > 80
Escherichia coli ECRC98 0.47 JDDGAC_24920 yfiH purine nucleoside phosphorylase YfiH 0.42 JDDGAC_27560 maiA maleylacetoacetate isomerase low > 87
Escherichia coli ECRC101 0.47 MCAODC_11785 yfiH purine nucleoside phosphorylase YfiH 0.42 MCAODC_14655 maiA maleylacetoacetate isomerase low > 87
Klebsiella michiganensis M5al 0.47 BWI76_RS21445 hypothetical protein 0.45 BWI76_RS19575 maleylacetoacetate isomerase low > 92
Pseudomonas sp. SVBP6 0.46 COO64_RS11060 pgeF peptidoglycan editing factor PgeF 0.37 COO64_RS03645 maiA maleylacetoacetate isomerase low > 91
Pseudomonas sp. RS175 0.46 PFR28_03747 Polyphenol oxidase 0.29 PFR28_00223 Maleylpyruvate isomerase low > 88
Escherichia coli ECRC62 0.46 BNILDI_11735 yfiH purine nucleoside phosphorylase YfiH 0.42 BNILDI_14095 maiA maleylacetoacetate isomerase low > 75
Pseudomonas aeruginosa PUPa3 0.46 NPBIFN_04811 pgeF peptidoglycan editing factor PgeF 0.37 NPBIFN_02651 maiA maleylacetoacetate isomerase low > 101
Pseudomonas aeruginosa PA14 0.46 IKLFDK_00815 peptidoglycan editing factor PgeF 0.38 IKLFDK_12145 maleylacetoacetate isomerase low > 98
Pseudomonas aeruginosa MRSN321 0.45 PFGADD_04750 pgeF peptidoglycan editing factor PgeF 0.37 PFGADD_02619 maiA maleylacetoacetate isomerase low > 99
Pseudomonas sp. BP01 0.45 JOY50_RS27135 pgeF peptidoglycan editing factor PgeF 0.37 JOY50_RS15545 maiA maleylacetoacetate isomerase low > 84
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_5128 COG1496: Uncharacterized conserved protein 0.32 Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 103
Pseudomonas orientalis W4I3 0.45 QF045_RS06810 peptidoglycan editing factor PgeF 0.33 QF045_RS08005 maleylacetoacetate isomerase low > 93
Pseudomonas putida KT2440 0.45 PP_0624 Uncharacterized protein YfiH 0.33 PP_4619 Maleylacetoacetate isomerase low > 96
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_00970 Polyphenol oxidase 0.31 GEMAOFIL_01212 Maleylpyruvate isomerase low > 96
Pseudomonas simiae WCS417 0.45 PS417_03825 laccase 0.31 PS417_05025 maleylacetoacetate isomerase low > 88
Pseudomonas stutzeri RCH2 0.44 Psest_0710 uncharacterized protein, YfiH family 0.55 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS03875 peptidoglycan editing factor PgeF 0.29 PFLU_RS05095 maleylacetoacetate isomerase low > 109
Pseudomonas fluorescens SBW25 0.44 PFLU_RS03875 peptidoglycan editing factor PgeF 0.29 PFLU_RS05095 maleylacetoacetate isomerase low > 109
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_2533 Uncharacterized conserved protein 0.48 B158DRAFT_1449 maleylacetoacetate isomerase — —
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2823 COG1496: Uncharacterized conserved protein 0.33 Pf1N1B4_1023 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 87
Pseudomonas protegens RBAN4 0.44 FABNJH_26805 pgeF peptidoglycan editing factor PgeF 0.31 FABNJH_05015 maiA maleylacetoacetate isomerase — —
Pseudomonas sp. S08-1 0.43 OH686_16415 Multicopper polyphenol oxidase 0.53 OH686_21095 maleylacetoacetate isomerase low > 80
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1494 COG1496: Uncharacterized conserved protein 0.32 PfGW456L13_4960 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 87
Pseudomonas sp. DMC3 0.43 GFF4005 Polyphenol oxidase 0.33 GFF1878 Maleylpyruvate isomerase low > 89
Variovorax sp. SCN45 0.43 GFF807 FIG00003370: Multicopper polyphenol oxidase 0.41 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 127
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_14225 laccase 0.33 AO353_15560 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 101
Shewanella sp. ANA-3 0.42 Shewana3_3170 hypothetical protein (RefSeq) 0.57 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) low > 73
Shewanella loihica PV-4 0.42 Shew_2949 hypothetical protein (RefSeq) 0.53 Shew_1439 maleylacetoacetate isomerase (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS15065 laccase 0.50 HSERO_RS05615 maleylacetoacetate isomerase — —
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS07595 hypothetical protein 0.52 RR42_RS01970 maleylacetoacetate isomerase low > 128
Shewanella oneidensis MR-1 0.41 SO3578 conserved hypothetical protein TIGR00726 (NCBI ptt file) 0.57 SO1671 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 76
Shewanella amazonensis SB2B 0.41 Sama_2604 hypothetical protein (RefSeq) 0.52 Sama_2218 maleylacetoacetate isomerase (RefSeq) low > 62
Variovorax sp. OAS795 0.41 ABID97_RS12405 peptidoglycan editing factor PgeF 0.41 ABID97_RS12400 maleylacetoacetate isomerase low > 91
Ralstonia solanacearum GMI1000 0.41 RS_RS08210 peptidoglycan editing factor PgeF 0.48 RS_RS01895 maleylacetoacetate isomerase low > 80
Lysobacter sp. OAE881 0.39 ABIE51_RS04890 peptidoglycan editing factor PgeF 0.54 ABIE51_RS04250 maleylacetoacetate isomerase low > 62
Ralstonia solanacearum PSI07 0.39 RPSI07_RS15975 peptidoglycan editing factor PgeF 0.49 RPSI07_RS22255 maleylacetoacetate isomerase low > 81
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS09140 laccase 0.51 BPHYT_RS02805 maleylacetoacetate isomerase — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_2305 COG1496: Uncharacterized conserved protein 0.41 Ac3H11_2306 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 79
Paraburkholderia graminis OAS925 0.38 ABIE53_002063 YfiH family protein 0.51 ABIE53_000699 maleylpyruvate isomerase low > 113
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS01515 peptidoglycan editing factor PgeF 0.48 RALBFv3_RS11050 maleylacetoacetate isomerase low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS14825 peptidoglycan editing factor PgeF 0.48 UW163_RS02530 maleylacetoacetate isomerase — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS13310 peptidoglycan editing factor PgeF 0.50 ABZR87_RS06920 maleylacetoacetate isomerase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00849 conserved hypothetical protein 0.52 H281DRAFT_01970 maleylacetoacetate isomerase (EC 5.2.1.2) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1363.1 COG1496: Uncharacterized conserved protein 0.43 Xcc-8004.4525.1 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF4798 COG1496: Uncharacterized conserved protein 0.41 GFF4799 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) — —
Castellaniella sp019104865 MT123 0.35 ABCV34_RS01890 peptidoglycan editing factor PgeF 0.50 ABCV34_RS13685 maleylacetoacetate isomerase low > 48
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS05050 peptidoglycan editing factor PgeF 0.52 LRK53_RS04290 maleylacetoacetate isomerase — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS22210 peptidoglycan editing factor PgeF 0.52 QEN71_RS01655 maleylacetoacetate isomerase low > 153
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS04960 peptidoglycan editing factor PgeF 0.52 LRK54_RS05735 maleylacetoacetate isomerase low > 59
Rhodanobacter denitrificans MT42 0.33 LRK55_RS04740 peptidoglycan editing factor PgeF 0.52 LRK55_RS05490 maleylacetoacetate isomerase 0.74 42
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_01795 pgeF peptidoglycan editing factor PgeF 0.50 OKGIIK_01115 maiA maleylacetoacetate isomerase low > 53
Alteromonas macleodii MIT1002 0.33 MIT1002_02678 Laccase domain protein YfiH 0.53 MIT1002_01149 Maleylpyruvate isomerase low > 70
Acinetobacter baumannii LAC-4 0.32 RR41_RS15065 peptidoglycan editing factor PgeF 0.53 RR41_RS00340 maleylacetoacetate isomerase low > 55
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS10960 peptidoglycan editing factor PgeF 0.54 ABZR86_RS18680 maleylacetoacetate isomerase low > 74
Acinetobacter radioresistens SK82 0.31 MPMX26_00736 Polyphenol oxidase 0.51 MPMX26_02378 Maleylpyruvate isomerase low > 36
Xanthobacter sp. DMC5 0.28 GFF1931 Polyphenol oxidase 0.42 GFF4529 Maleylpyruvate isomerase — —
Sinorhizobium meliloti 1021 0.27 SMc02683 hypothetical protein 0.35 SMc03206 maleylacetoacetate isomerase (glutathione transferase zeta 1) protein low > 103
Rhodopseudomonas palustris CGA009 0.27 TX73_022600 peptidoglycan editing factor PgeF 0.46 TX73_024280 maleylacetoacetate isomerase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS09865 peptidoglycan editing factor PgeF 0.42 A4249_RS12095 maleylacetoacetate isomerase — —
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_00523 multicopper polyphenol oxidase 0.35 CCNA_03683 maleylpyruvate isomerase low > 67
Caulobacter crescentus NA1000 0.25 CCNA_00523 multicopper polyphenol oxidase 0.35 CCNA_03683 maleylpyruvate isomerase — —

Not shown: 34 genomes with orthologs for CSW01_03700 only; 4 genomes with orthologs for CSW01_06790 only