| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07875 | | cytochrome BD ubiquinol oxidase subunit II | 1.0 | CSW01_04915 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | 0.69 | 2 |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS25830 | | cytochrome BD ubiquinol oxidase subunit II | 0.59 | RR42_RS02855 | | dimethylallyladenosine tRNA methylthiotransferase | low | > 128 |
| Dinoroseobacter shibae DFL-12 | 0.51 | Dshi_2689 | | cytochrome bd ubiquinol oxidase subunit II (RefSeq) | 0.43 | Dshi_1019 | | RNA modification enzyme, MiaB family (RefSeq) | low | > 64 |
| Ralstonia solanacearum GMI1000 | 0.50 | RS_RS23140 | | cytochrome d ubiquinol oxidase subunit II | 0.59 | RS_RS02645 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 80 |
| Ralstonia solanacearum UW163 | 0.49 | UW163_RS21305 | | cytochrome bd ubiquinol oxidase subunit II | 0.59 | UW163_RS01760 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.49 | RALBFv3_RS17835 | | cytochrome bd ubiquinol oxidase subunit II | 0.59 | RALBFv3_RS11825 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.49 | ABZR87_RS18835 | | cytochrome d ubiquinol oxidase subunit II | 0.59 | ABZR87_RS07780 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS05725 | | cytochrome d ubiquinol oxidase subunit II | 0.59 | RPSI07_RS21380 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.45 | GFF216 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | 0.59 | GFF613 | | tRNA-i(6)A37 methylthiotransferase | low | > 90 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_03622 | | Cytochrome d ubiquinol oxidase subunit 2 | 0.76 | MIT1002_01480 | | (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB | low | > 70 |
| Xanthobacter sp. DMC5 | 0.34 | GFF3217 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | 0.44 | GFF3719 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | — | — |
| Bosea sp. OAE506 | 0.34 | ABIE41_RS22795 | | cytochrome d ubiquinol oxidase subunit II | 0.41 | ABIE41_RS04495 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 77 |
| Enterobacter sp. TBS_079 | 0.33 | MPMX20_02428 | | Cytochrome bd-II ubiquinol oxidase subunit 2 | 0.76 | MPMX20_01311 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 85 |
| Rahnella sp. WP5 | 0.33 | EX31_RS02075 | | cytochrome d ubiquinol oxidase subunit II | 0.76 | EX31_RS23205 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 89 |
| Pseudomonas sp. RS175 | 0.33 | PFR28_03800 | | Cytochrome bd-II ubiquinol oxidase subunit 2 | 0.63 | PFR28_03848 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 88 |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS28655 | | cytochrome d ubiquinol oxidase subunit II | 0.59 | ABID97_RS06475 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 91 |
| Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_13945 | | ubiquinol oxidase subunit II | 0.63 | AO353_06375 | | (dimethylallyl)adenosine tRNA methylthiotransferase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.32 | AO356_15645 | | ubiquinol oxidase subunit II | 0.63 | AO356_15410 | | (dimethylallyl)adenosine tRNA methylthiotransferase | low | > 104 |
| Pseudomonas orientalis W4I3 | 0.32 | QF045_RS26640 | | cytochrome d ubiquinol oxidase subunit II | 0.62 | QF045_RS26910 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 93 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS14255 | | terminal oxidase subunit II | 0.79 | BWI76_RS08135 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.32 | A4249_RS11600 | | cytochrome d ubiquinol oxidase subunit II | 0.41 | A4249_RS14720 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 48 |
| Pseudomonas sp. S08-1 | 0.32 | OH686_16120 | | cytochrome d ubiquinol oxidase, subunit II | 0.64 | OH686_09215 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | low | > 80 |
| Sphingomonas koreensis DSMZ 15582 | 0.32 | Ga0059261_3866 | | cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein (EC 1.10.3.10) | 0.36 | Ga0059261_1604 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | low | > 68 |
| Pseudomonas fluorescens SBW25 | 0.32 | PFLU_RS26265 | | cytochrome d ubiquinol oxidase subunit II | 0.63 | PFLU_RS26555 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.32 | COO64_RS02890 | cydB | cytochrome d ubiquinol oxidase subunit II | 0.63 | COO64_RS15510 | miaB | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 93 |
| Pseudomonas segetis P6 | 0.32 | MPMX49_03991 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | 0.62 | MPMX49_01071 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 75 |
| Pseudomonas lactucae CFBP13502 | 0.32 | GEMAOFIL_05022 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | 0.63 | GEMAOFIL_05078 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.32 | PS417_24345 | | ubiquinol oxidase subunit II | 0.63 | PS417_24625 | | (dimethylallyl)adenosine tRNA methylthiotransferase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.32 | PFLU_RS26265 | | cytochrome d ubiquinol oxidase subunit II | 0.63 | PFLU_RS26555 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.32 | Pf6N2E2_5069 | | putative Cytochrome bd2, subunit II | 0.63 | Pf6N2E2_5018 | | tRNA-i(6)A37 methylthiotransferase | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_2761 | | putative Cytochrome bd2, subunit II | 0.63 | Pf1N1B4_2712 | | tRNA-i(6)A37 methylthiotransferase | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.31 | PfGW456L13_1436 | | putative Cytochrome bd2, subunit II | 0.63 | PfGW456L13_1380 | | tRNA-i(6)A37 methylthiotransferase | low | > 87 |
| Enterobacter asburiae PDN3 | 0.31 | EX28DRAFT_1022 | | cytochrome d oxidase, subunit II (cydB) | 0.77 | EX28DRAFT_2310 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | low | > 76 |
| Pseudomonas sp. DMC3 | 0.31 | GFF3946 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | 0.63 | GFF3900 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 89 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.31 | Psyr_4281 | | cytochrome bd quinol oxidase subunit 2 apoprotein | 0.64 | Psyr_4345 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | low | > 86 |
| Shewanella sp. ANA-3 | 0.31 | Shewana3_0927 | | cytochrome d ubiquinol oxidase, subunit II (RefSeq) | 0.78 | Shewana3_1008 | | tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.31 | Psyr_4281 | | cytochrome bd quinol oxidase subunit 2 apoprotein | 0.64 | Psyr_4345 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | low | > 86 |
| Pseudomonas aeruginosa PUPa3 | 0.31 | DQ20_RS48535 | cioB;inference=COORDINATES | cyanide-insensitive cytochrome bd quinol oxidase subunit II | 0.64 | DQ20_RS48275 | miaB;go_function=transferase | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.31 | IKLFDK_20270 | | cyanide-insensitive cytochrome bd quinol oxidase subunit II | 0.64 | IKLFDK_20540 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.31 | DY961_RS13215 | cioB;inference=COORDINATES | cyanide-insensitive cytochrome bd quinol oxidase subunit II | 0.64 | DY961_RS12950 | miaB;go_function=transferase | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 100 |
| Pseudomonas stutzeri RCH2 | 0.31 | Psest_2558 | | cytochrome d oxidase, subunit II (cydB) | 0.64 | Psest_0532 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | low | > 67 |
| Pantoea sp. MT58 | 0.31 | IAI47_03475 | | cytochrome d ubiquinol oxidase subunit II | 0.79 | IAI47_13945 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 76 |
| Phaeobacter inhibens DSM 17395 | 0.31 | PGA1_c19660 | | cytochrome d ubiquinol oxidase subunit 2 | 0.41 | PGA1_c04710 | | (dimethylallyl)adenosine tRNA methylthiotransferase MiaB | low | > 62 |
| Klebsiella pneumoniae MKP103 | 0.31 | KDGMDA_18975 | | cytochrome d ubiquinol oxidase subunit II | 0.79 | KDGMDA_16495 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 95 |
| Azospirillum sp. SherDot2 | 0.31 | MPMX19_05025 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | 0.44 | MPMX19_02511 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 112 |
| Methylophilus sp. DMC18 | 0.31 | GFF1117 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | 0.52 | GFF2710 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 43 |
| Erwinia amylovora T8 | 0.31 | OLJFJH_17325 | | cytochrome d ubiquinol oxidase subunit II | 0.77 | OLJFJH_17145 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 58 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS02045 | | cytochrome d ubiquinol oxidase subunit II | 0.63 | ABIE51_RS15455 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 62 |
| Sphingobium sp. HT1-2 | 0.30 | GFF5359 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | 0.39 | GFF3937 | | tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) | low | > 95 |
| Pantoea agglomerans CFBP13505 P0401 | 0.30 | PagCFBP13505_RS16230 | | cytochrome d ubiquinol oxidase subunit II | 0.80 | PagCFBP13505_RS03360 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 74 |
| Dickeya dadantii 3937 | 0.30 | DDA3937_RS08550 | | cytochrome d ubiquinol oxidase subunit II | 0.82 | DDA3937_RS06250 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 74 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_06442 | | cytochrome d ubiquinol oxidase subunit II | 0.59 | H281DRAFT_04239 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.30 | TX73_024915 | | cytochrome d ubiquinol oxidase subunit II | 0.38 | TX73_002325 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 86 |
| Rhodospirillum rubrum S1H | 0.30 | Rru_A0561 | | Cytochrome bd ubiquinol oxidase, subunit II (NCBI) | 0.42 | Rru_A3770 | | tRNA-i(6)A37 modification enzyme MiaB (NCBI) | low | > 58 |
| Acinetobacter baumannii LAC-4 | 0.30 | RR41_RS05045 | | cytochrome d ubiquinol oxidase subunit II | 0.58 | RR41_RS02450 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 55 |
| Kangiella aquimarina DSM 16071 | 0.30 | B158DRAFT_1248 | | cytochrome d oxidase, subunit II (cydB) | 0.69 | B158DRAFT_0099 | | tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB | low | > 40 |
| Serratia liquefaciens MT49 | 0.30 | IAI46_15415 | | cytochrome d ubiquinol oxidase subunit II | 0.78 | IAI46_06025 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 87 |
| Synechococcus elongatus PCC 7942 | 0.29 | Synpcc7942_1766 | cydB | cytochrome d ubiquinol oxidase, subunit II | 0.34 | Synpcc7942_2374 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | low | > 38 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.29 | Xcc-8004.1652.1 | | putative Cytochrome bd2, subunit II | 0.63 | Xcc-8004.2224.1 | | tRNA-i(6)A37 methylthiotransferase | low | > 74 |
| Marinobacter adhaerens HP15 | 0.29 | HP15_1747 | | cytochrome d ubiquinol oxidase, subunit II | 0.66 | HP15_2466 | | tRNA-i(6)A37 thiotransferase enzyme MiaB | low | > 73 |
| Synechocystis sp000284455 PCC 6803 | 0.29 | SGL_RS05015 | | cytochrome d ubiquinol oxidase subunit II | 0.35 | SGL_RS04845 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 52 |
| Acinetobacter radioresistens SK82 | 0.29 | MPMX26_01455 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | 0.58 | MPMX26_02667 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.28 | GFF4255 | | putative Cytochrome bd2, subunit II | 0.79 | GFF4579 | | tRNA-i(6)A37 methylthiotransferase | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.28 | QEN71_RS37520 | | cytochrome d ubiquinol oxidase subunit II | 0.59 | QEN71_RS02195 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.28 | BPHYT_RS28410 | | ubiquinol oxidase subunit II, cyanide insensitive | 0.58 | BPHYT_RS16535 | | tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | low | > 109 |
| Sinorhizobium meliloti 1021 | 0.27 | SMc02254 | | quinol oxidase subunit II transmembrane protein | 0.42 | SMc01115 | | (dimethylallyl)adenosine tRNA methylthiotransferase | — | — |
| Castellaniella sp019104865 MT123 | 0.21 | ABCV34_RS08000 | | cytochrome d ubiquinol oxidase subunit II | 0.59 | ABCV34_RS15345 | | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | low | > 48 |
Not shown: 3 genomes with orthologs for CSW01_07875 only; 54 genomes with orthologs for CSW01_04915 only