Conservation of cofitness between CSW01_17175 and CSW01_03840 in Vibrio cholerae E7946 ATCC 55056

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17175 ABC transporter permease 1.0 CSW01_03840 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.41 10
Pectobacterium carotovorum WPP14 0.71 HER17_RS12930 microcin C ABC transporter permease 0.70 HER17_RS15995 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 75
Pseudomonas aeruginosa PA14 0.70 IKLFDK_08790 ABC transporter permease 0.64 IKLFDK_19690 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 101
Dickeya dadantii 3937 0.69 DDA3937_RS09180 ABC transporter permease subunit 0.72 DDA3937_RS05465 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.56 52
Dickeya dianthicola 67-19 0.69 HGI48_RS09220 ABC transporter permease subunit 0.72 HGI48_RS05525 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 71
Escherichia coli ECRC102 0.69 NIAGMN_21145 yejE Inner membrane ABC transporter permease protein YejE 0.73 NIAGMN_06565 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC98 0.69 JDDGAC_27340 yejE Inner membrane ABC transporter permease protein YejE 0.73 JDDGAC_12165 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.72 17
Escherichia coli ECRC99 0.69 KEDOAH_04805 yejE Inner membrane ABC transporter permease protein YejE 0.73 KEDOAH_19455 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia coli ECRC100 0.69 OKFHMN_23380 yejE Inner membrane ABC transporter permease protein YejE 0.73 OKFHMN_08510 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 80
Escherichia coli ECRC101 0.69 MCAODC_14430 yejE Inner membrane ABC transporter permease protein YejE 0.73 MCAODC_27735 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 87
Pseudomonas stutzeri RCH2 0.68 Psest_2065 ABC-type uncharacterized transport system, permease component 0.66 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Escherichia coli BW25113 0.68 b2179 yejE predicted oligopeptide transporter subunit (NCBI) 0.73 b0405 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF3757 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.73 GFF4304 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_01530 Inner membrane ABC transporter permease protein YejE 0.73 OHPLBJKB_03271 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 73
Escherichia coli Nissle 1917 0.68 ECOLIN_RS12740 ABC transporter permease 0.72 ECOLIN_RS02440 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Escherichia fergusonii Becca 0.68 EFB2_01677 Inner membrane ABC transporter permease protein YejE 0.73 EFB2_03652 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 86
Escherichia coli BL21 0.68 ECD_02109 microcin C ABC transporter permease 0.73 ECD_00353 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 61
Escherichia coli ECRC62 0.68 BNILDI_13875 yejE Inner membrane ABC transporter permease protein YejE 0.73 BNILDI_22860 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 75
Escherichia coli ECOR27 0.68 NOLOHH_14955 yejE Inner membrane ABC transporter permease protein YejE 0.73 NOLOHH_01445 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 75
Pseudomonas sp. S08-1 0.68 OH686_03610 ABC transporter, permease protein 2 0.67 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 80
Escherichia coli ECOR38 0.68 HEPCGN_22645 yejE Inner membrane ABC transporter permease protein YejE 0.73 HEPCGN_07150 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 87
Dickeya dianthicola ME23 0.68 DZA65_RS09525 ABC transporter permease subunit 0.72 DZA65_RS05850 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 75
Klebsiella michiganensis M5al 0.68 BWI76_RS19790 putative binding-protein-dependent transporter 0.72 BWI76_RS06295 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 92
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS12885 ABC transporter permease 0.66 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.38 22
Pseudomonas fluorescens SBW25 0.68 PFLU_RS12885 ABC transporter permease 0.66 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 109
Pseudomonas sp. RS175 0.67 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.65 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.64 Psyr_1227 Queuosine biosynthesis protein low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.64 Psyr_1227 Queuosine biosynthesis protein low > 86
Pseudomonas sp. SVBP6 0.67 COO64_RS19225 ABC transporter permease 0.67 COO64_RS03845 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 93
Pseudomonas putida KT2440 0.67 PP_4149 putative inner membrane ABC transporter permease protein 0.67 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 96
Pseudomonas sp. BP01 0.67 JOY50_RS07115 ABC transporter permease 0.67 JOY50_RS22870 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 84
Serratia liquefaciens MT49 0.67 IAI46_17325 ABC transporter permease subunit 0.72 IAI46_04835 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 86
Marinobacter adhaerens HP15 0.67 HP15_1809 peptide ABC transporter, permease protein 0.64 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 73
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.65 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_24455 ABC transporter permease 0.65 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 104
Erwinia tracheiphila SCR3 0.67 LU632_RS17575 microcin C ABC transporter permease 0.72 LU632_RS18485 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 74
Erwinia amylovora T8 0.66 OLJFJH_11730 microcin ABC transporter permease 0.72 OLJFJH_18145 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.34 54
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.67 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 87
Pseudomonas sp. DMC3 0.66 GFF1017 Inner membrane ABC transporter permease protein YejE 0.67 GFF4360 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 89
Pseudomonas simiae WCS417 0.66 PS417_12195 ABC transporter permease 0.67 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase 0.31 40
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_23465 ABC transporter permease 0.67 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 101
Azospirillum sp. SherDot2 0.66 MPMX19_02170 Inner membrane ABC transporter permease protein YejE 0.42 MPMX19_01696 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 112
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.67 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) — —
Enterobacter sp. TBS_079 0.66 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.74 MPMX20_00996 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 85
Enterobacter asburiae PDN3 0.65 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.74 EX28DRAFT_2566 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 76
Rahnella sp. WP5 0.64 EX31_RS19140 ABC transporter permease subunit 0.71 EX31_RS22090 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 89
Xanthobacter sp. DMC5 0.63 GFF1647 Inner membrane ABC transporter permease protein YejE 0.37 GFF566 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Rhodospirillum rubrum S1H 0.63 Rru_A3168 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.41 Rru_A0281 Queuosine biosynthesis protein (NCBI) low > 58
Pantoea sp. MT58 0.61 IAI47_06605 ABC transporter permease subunit 0.73 IAI47_14810 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 76
Rhodopseudomonas palustris CGA009 0.61 TX73_019115 ABC transporter permease 0.35 TX73_013480 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 86
Bosea sp. OAE506 0.60 ABIE41_RS23970 ABC transporter permease 0.39 ABIE41_RS17830 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 77
Rhizobium sp. OAE497 0.60 ABIE40_RS00625 ABC transporter permease 0.39 ABIE40_RS09430 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 107
Magnetospirillum magneticum AMB-1 0.59 AMB_RS22190 ABC transporter permease 0.38 AMB_RS03085 S-adenosylmethionine:tRNA ribosyltransferase-isomerase — —
Acinetobacter radioresistens SK82 0.59 MPMX26_02271 Inner membrane ABC transporter permease protein YejE 0.54 MPMX26_00441 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 36
Dinoroseobacter shibae DFL-12 0.58 Dshi_0657 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.39 Dshi_1180 Queuosine biosynthesis protein (RefSeq) low > 64
Agrobacterium fabrum C58 0.57 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.38 Atu1678 S-adenosylmethionine tRNA ribosyltransferase-isomerase low > 89
Sinorhizobium meliloti 1021 0.55 SMc02830 ABC transporter permease 0.36 SMc01207 S-adenosylmethionine--tRNA ribosyltransferase-isomerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.54 DVU2386 oppC ABC transporter, permease protein (TIGR) 0.41 DVU3351 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) low > 55
Phaeobacter inhibens DSM 17395 0.53 PGA1_c30160 ABC transporter permease protein 0.40 PGA1_c17420 S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA low > 62
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS12375 peptide ABC transporter permease 0.50 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00562 microcin C transport system permease protein 0.50 H281DRAFT_04671 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 103
Ralstonia solanacearum GMI1000 0.50 RS_RS05860 ABC transporter permease 0.53 RS_RS13570 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 80
Paraburkholderia graminis OAS925 0.50 ABIE53_002548 microcin C transport system permease protein 0.51 ABIE53_000832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 113
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS15045 ABC transporter permease 0.53 RALBFv3_RS05680 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS12515 ABC transporter permease 0.53 UW163_RS07945 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA — —
Ralstonia solanacearum PSI07 0.50 RPSI07_RS18330 ABC transporter permease 0.53 RPSI07_RS11620 S-adenosylmethionine:tRNA ribosyltransferase-isomerase low > 81
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS06180 ABC transporter permease 0.51 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 153
Variovorax sp. SCN45 0.49 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.50 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) low > 127
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS10690 ABC transporter permease 0.52 ABZR87_RS01275 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13375 peptide ABC transporter permease 0.51 RR42_RS17395 S-adenosylmethionine tRNA ribosyltransferase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF4337 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.48 GFF2801 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 90
Acidovorax sp. GW101-3H11 0.47 Ac3H11_2909 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.48 Ac3H11_778 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) low > 79
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS17135 peptide ABC transporter permease 0.54 HSERO_RS06170 S-adenosylmethionine tRNA ribosyltransferase low > 78
Variovorax sp. OAS795 0.44 ABID97_RS16510 ABC transporter permease 0.50 ABID97_RS01590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA low > 91

Not shown: 0 genomes with orthologs for CSW01_17175 only; 36 genomes with orthologs for CSW01_03840 only