Conservation of cofitness between CSW01_00175 and CSW01_03105 in Vibrio cholerae E7946 ATCC 55056

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00175 serine/threonine protein kinase 1.0 CSW01_03105 hypoxanthine phosphoribosyltransferase 0.62 12
Pantoea sp. MT58 0.63 IAI47_00420 serine/threonine protein kinase 0.78 IAI47_15690 hypoxanthine phosphoribosyltransferase low > 76
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS18935 serine/threonine protein kinase 0.76 PagCFBP13505_RS13310 hypoxanthine phosphoribosyltransferase low > 74
Rahnella sp. WP5 0.62 EX31_RS15915 serine/threonine protein kinase 0.76 EX31_RS03330 hypoxanthine phosphoribosyltransferase low > 89
Serratia liquefaciens MT49 0.62 IAI46_25000 serine/threonine protein kinase 0.78 IAI46_21275 hypoxanthine phosphoribosyltransferase low > 87
Pectobacterium carotovorum WPP14 0.60 HER17_RS21480 serine/threonine protein kinase 0.78 HER17_RS05530 hypoxanthine phosphoribosyltransferase low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS00095 serine/threonine protein kinase 0.78 DDA3937_RS15985 hypoxanthine phosphoribosyltransferase low > 74
Dickeya dianthicola ME23 0.59 DZA65_RS22245 serine/threonine protein kinase 0.77 DZA65_RS17185 hypoxanthine phosphoribosyltransferase low > 75
Escherichia coli ECRC100 0.59 OKFHMN_14175 srkA stress response kinase SrkA 0.76 OKFHMN_10445 hpt hypoxanthine phosphoribosyltransferase low > 79
Escherichia coli ECRC99 0.59 KEDOAH_13975 srkA stress response kinase SrkA 0.76 KEDOAH_17710 hpt hypoxanthine phosphoribosyltransferase — —
Dickeya dianthicola 67-19 0.59 HGI48_RS21270 serine/threonine protein kinase 0.78 HGI48_RS16100 hypoxanthine phosphoribosyltransferase low > 71
Escherichia coli ECRC101 0.59 MCAODC_04675 srkA stress response kinase SrkA 0.76 MCAODC_00960 hpt hypoxanthine phosphoribosyltransferase low > 87
Escherichia coli ECOR27 0.59 NOLOHH_06305 srkA stress response kinase SrkA 0.76 NOLOHH_02790 hpt hypoxanthine phosphoribosyltransferase low > 76
Escherichia coli ECRC62 0.59 BNILDI_05225 srkA stress response kinase SrkA 0.76 BNILDI_08880 hpt hypoxanthine phosphoribosyltransferase low > 75
Escherichia coli ECRC102 0.59 NIAGMN_11930 srkA stress response kinase SrkA 0.76 NIAGMN_08295 hpt hypoxanthine phosphoribosyltransferase low > 80
Escherichia coli ECRC98 0.59 JDDGAC_17800 srkA stress response kinase SrkA 0.76 JDDGAC_14040 hpt hypoxanthine phosphoribosyltransferase low > 87
Escherichia coli Nissle 1917 0.59 ECOLIN_RS22245 stress response kinase SrkA 0.76 ECOLIN_RS00695 hypoxanthine phosphoribosyltransferase low > 55
Escherichia fergusonii Becca 0.59 EFB2_04758 Stress response kinase A 0.76 EFB2_03920 Hypoxanthine phosphoribosyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_04194 Stress response kinase A 0.76 OHPLBJKB_03536 Hypoxanthine phosphoribosyltransferase low > 74
Escherichia coli BL21 0.59 ECD_03745 Cpx stress response Thr/Ser protein kinase; MazF antagonist protein 0.76 ECD_00124 hypoxanthine phosphoribosyltransferase low > 61
Escherichia coli BW25113 0.59 b3859 yihE predicted kinase (NCBI) 0.76 b0125 hpt hypoxanthine phosphoribosyltransferase (VIMSS) low > 76
Escherichia coli ECOR38 0.58 HEPCGN_12810 srkA stress response kinase SrkA 0.76 HEPCGN_08425 hpt hypoxanthine phosphoribosyltransferase low > 88
Klebsiella michiganensis M5al 0.58 BWI76_RS00340 stress response kinase A 0.76 BWI76_RS04955 hypoxanthine phosphoribosyltransferase low > 92
Klebsiella pneumoniae MKP103 0.58 KDGMDA_08955 serine/threonine protein kinase 0.77 KDGMDA_13210 hypoxanthine phosphoribosyltransferase low > 95
Erwinia amylovora T8 0.57 OLJFJH_05460 serine/threonine protein kinase 0.78 OLJFJH_00815 hypoxanthine phosphoribosyltransferase low > 58
Enterobacter asburiae PDN3 0.57 EX28DRAFT_4340 Putative homoserine kinase type II (protein kinase fold) 0.77 EX28DRAFT_3722 hypoxanthine phosphoribosyltransferase — —
Enterobacter sp. TBS_079 0.57 MPMX20_04604 Stress response kinase A 0.77 MPMX20_00819 Hypoxanthine phosphoribosyltransferase low > 85
Shewanella loihica PV-4 0.57 Shew_0264 serine/threonine protein kinase (RefSeq) 0.68 Shew_3142 hypoxanthine phosphoribosyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.57 SO0332 hypothetical kinase (NCBI ptt file) 0.68 SO3803 hpt-2 hypoxanthine phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.57 Shewana3_3839 serine/threonine protein kinase (RefSeq) 0.70 Shewana3_0793 hypoxanthine phosphoribosyltransferase (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF2212 YihE protein, a ser/thr kinase implicated in LPS synthesis and Cpx signalling 0.76 GFF103 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) low > 78
Erwinia tracheiphila SCR3 0.54 LU632_RS23880 serine/threonine protein kinase 0.74 LU632_RS20135 hpt hypoxanthine phosphoribosyltransferase low > 73
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_10980 serine/threonine protein kinase 0.74 IJEDHG_15005 hpt hypoxanthine phosphoribosyltransferase low > 61
Shewanella amazonensis SB2B 0.53 Sama_3322 serine/threonine protein kinase (RefSeq) 0.66 Sama_0771 hypoxanthine phosphoribosyltransferase (RefSeq) low > 62
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS00430 serine/threonine protein kinase 0.18 QEN71_RS27245 hypoxanthine-guanine phosphoribosyltransferase low > 153
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4755 YihE protein, required for LPS synthesis 0.18 Pf6N2E2_5237 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) low > 103
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_14115 serine/threonine protein kinase 0.18 AO356_16570 hypoxanthine-guanine phosphoribosyltransferase low > 104
Pseudomonas sp. DMC3 0.48 GFF80 Stress response kinase A 0.18 GFF4470 Hypoxanthine-guanine phosphoribosyltransferase low > 89
Pseudomonas orientalis W4I3 0.48 QF045_RS00435 serine/threonine protein kinase 0.18 QF045_RS07425 hypoxanthine-guanine phosphoribosyltransferase low > 93
Pseudomonas lactucae CFBP13502 0.48 GEMAOFIL_05326 Serine/threonine protein kinase RdoA 0.17 GEMAOFIL_01093 Hypoxanthine-guanine phosphoribosyltransferase low > 96
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_07545 serine/threonine protein kinase 0.18 AO353_14860 hypoxanthine-guanine phosphoribosyltransferase low > 101
Pseudomonas sp. RS175 0.48 PFR28_04107 Serine/threonine protein kinase RdoA 0.18 PFR28_03640 Hypoxanthine-guanine phosphoribosyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1143 YihE protein, required for LPS synthesis 0.19 PfGW456L13_1599 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) low > 87
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2481 YihE protein, required for LPS synthesis 0.17 Pf1N1B4_2935 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) low > 87
Dechlorosoma suillum PS 0.47 Dsui_2766 putative homoserine kinase type II (protein kinase fold) 0.19 Dsui_2699 hypoxanthine-guanine phosphoribosyltransferase low > 51
Pseudomonas sp. SVBP6 0.47 COO64_RS22745 serine/threonine protein kinase 0.18 COO64_RS03300 hypoxanthine-guanine phosphoribosyltransferase low > 93
Pseudomonas simiae WCS417 0.47 PS417_26025 serine/threonine protein kinase 0.18 PS417_04440 hypoxanthine-guanine phosphoribosyltransferase low > 88
Pseudomonas fluorescens SBW25 0.47 PFLU_RS27670 serine/threonine protein kinase 0.17 PFLU_RS04490 hypoxanthine-guanine phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS27670 serine/threonine protein kinase 0.17 PFLU_RS04490 hypoxanthine-guanine phosphoribosyltransferase low > 109
Pseudomonas stutzeri RCH2 0.47 Psest_0409 Putative homoserine kinase type II (protein kinase fold) 0.17 Psest_1121 Hypoxanthine-guanine phosphoribosyltransferase low > 67
Pseudomonas aeruginosa PUPa3 0.47 DQ20_RS36890 serine/threonine protein kinase 0.15 DQ20_RS55640 hypoxanthine-guanine phosphoribosyltransferase low > 101
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1377 Putative homoserine kinase type II (protein kinase fold) 0.23 B158DRAFT_2387 Hypoxanthine-guanine phosphoribosyltransferase low > 40
Pseudomonas aeruginosa PA14 0.47 IKLFDK_22995 serine/threonine protein kinase 0.15 IKLFDK_00270 hypoxanthine-guanine phosphoribosyltransferase low > 98
Pseudomonas sp. S08-1 0.47 OH686_10380 YihE protein, required for LPS synthesis 0.15 OH686_17995 Hypoxanthine-guanine phosphoribosyltransferase low > 80
Ralstonia solanacearum UW163 0.47 UW163_RS01710 serine/threonine protein kinase 0.18 UW163_RS07515 hypoxanthine-guanine phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS11880 serine/threonine protein kinase 0.18 RALBFv3_RS06110 hypoxanthine-guanine phosphoribosyltransferase low > 76
Pseudomonas segetis P6 0.47 MPMX49_00755 Stress response kinase A 0.16 MPMX49_03643 Hypoxanthine-guanine phosphoribosyltransferase low > 75
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS07855 serine/threonine protein kinase 0.18 ABZR87_RS01775 hypoxanthine-guanine phosphoribosyltransferase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS21320 serine/threonine protein kinase 0.18 RPSI07_RS11130 hypoxanthine-guanine phosphoribosyltransferase low > 81
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS02875 serine/threonine protein kinase 0.18 RR42_RS17895 hypoxanthine phosphoribosyltransferase low > 128
Ralstonia solanacearum GMI1000 0.46 RS_RS02700 serine/threonine protein kinase 0.17 RS_RS14060 hypoxanthine-guanine phosphoribosyltransferase low > 80
Pseudomonas sp. BP01 0.46 JOY50_RS17915 serine/threonine protein kinase 0.19 JOY50_RS19520 hypoxanthine-guanine phosphoribosyltransferase low > 84
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS01730 serine/threonine protein kinase 0.18 BPHYT_RS17085 hypoxanthine phosphoribosyltransferase low > 109
Pseudomonas aeruginosa MRSN321 0.46 DY961_RS22435 serine/threonine protein kinase 0.15 DY961_RS29055 hypoxanthine-guanine phosphoribosyltransferase low > 100
Paraburkholderia graminis OAS925 0.46 ABIE53_000438 Ser/Thr protein kinase RdoA (MazF antagonist) 0.18 ABIE53_003583 hypoxanthine phosphoribosyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_02190 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 0.18 H281DRAFT_06269 hypoxanthine phosphoribosyltransferase low > 103
Pseudomonas putida KT2440 0.46 PP_0359 serine/threonine protein kinase 0.20 PP_0747 Hypoxanthine-guanine phosphoribosyltransferase low > 96
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_4697 Aminoglycoside phosphotransferase 0.17 Psyr_0970 Phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_4697 Aminoglycoside phosphotransferase 0.17 Psyr_0970 Phosphoribosyltransferase low > 86
Marinobacter adhaerens HP15 0.41 HP15_2490 kinase 0.18 HP15_3351 hypoxanthine-guanine phosphoribosyltransferase low > 73
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS06900 serine/threonine protein kinase 0.21 LRK54_RS17015 hypoxanthine-guanine phosphoribosyltransferase low > 59
Rhodanobacter sp000427505 FW510-R12 0.37 LRK53_RS01500 serine/threonine protein kinase 0.20 LRK53_RS11925 hypoxanthine-guanine phosphoribosyltransferase low > 59
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_16730 srkA serine/threonine protein kinase 0.21 OKGIIK_07825 hptA hypoxanthine-guanine phosphoribosyltransferase low > 53
Rhodanobacter denitrificans MT42 0.37 LRK55_RS06645 serine/threonine protein kinase 0.21 LRK55_RS16730 hypoxanthine-guanine phosphoribosyltransferase low > 63
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS16915 serine/threonine protein kinase 0.20 ABZR86_RS07105 hypoxanthine-guanine phosphoribosyltransferase low > 74

Not shown: 6 genomes with orthologs for CSW01_00175 only; 29 genomes with orthologs for CSW01_03105 only